| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963142
Identifier: 157963142
GI number: 157963142
Start: 4069120
End: 4069644
Strand: Reverse
Name: 157963142
Synonym: Spea_3326
Alternate gene names: NA
Gene position: 4069644-4069120 (Counterclockwise)
Preceding gene: 157963143
Following gene: 157963141
Centisome position: 78.65
GC content: 44.19
Gene sequence:
>525_bases ATGTCAGTCCCTGTATCAGTGTCAGTCGAACAAATTCGTCAGCATATAGAAAACAATCCTGCTGCTATGCCAAGCCAAAT TGCCGCAGAGCTTAATATTAGCGAGTTTGATGTGGTATCAGCATTGCCCGTTGAACAGATTACTATCCTACCCTTAGCCG AGAAAGATGCGTTATTAGCCGAGCTACCAGAGTGGGGCAATATGACCACGATTGTGTCGGCATCGGGCAGTATTTTTGAA TTTAAAGGCAGTTTTCCAAAGGGAAAATATGCCCATGGTTATTACAACTTAATCACTAAAGGCGACGGTCTTCATGGTCA CTTAAAGCTAGATGTGATTACTGCGATTGCCCTCATTAGCAAACCCTTTAGAGGCACCGAAAGTCACTCTATTAACTTCT TTGGTTCGCAGGGGGAAGTGGTGTTTAAGGTGTACTTGGGCCGGGATAAAAAGCGCGTATTACTGCCAGAGCAAGTTGCC CGCTTTAATCAATTGAAGCAACAAGTATTAACCACGACCGCTTAA
Upstream 100 bases:
>100_bases TCAGAGAATATAAATGAGTTGGCCTCTTTGTCGTTTAGTTAACTAACGCATAGTTAACAAGCGCTTAGTTAATCATCACT TAGTTAATTGGAGATATTCC
Downstream 100 bases:
>100_bases GCTATTCGAATAAACCTTAAAATAAGAGAGTAGAGTAATGACTATAGAAAAAGAACAAAGATTACGAGAAAAGCTGTTAC CAGAAATTGAAGCTTTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Heme Utilization Protein HuvX; Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HutX Protein; Heme Utilization Protein HugX; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Heme Uptake And Utilization Protein HuvX; Oxygen Independent Coproporphyrinogen III Oxidase; Coproporphyrinogen Dehydrogenase
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSVPVSVSVEQIRQHIENNPAAMPSQIAAELNISEFDVVSALPVEQITILPLAEKDALLAELPEWGNMTTIVSASGSIFE FKGSFPKGKYAHGYYNLITKGDGLHGHLKLDVITAIALISKPFRGTESHSINFFGSQGEVVFKVYLGRDKKRVLLPEQVA RFNQLKQQVLTTTA
Sequences:
>Translated_174_residues MSVPVSVSVEQIRQHIENNPAAMPSQIAAELNISEFDVVSALPVEQITILPLAEKDALLAELPEWGNMTTIVSASGSIFE FKGSFPKGKYAHGYYNLITKGDGLHGHLKLDVITAIALISKPFRGTESHSINFFGSQGEVVFKVYLGRDKKRVLLPEQVA RFNQLKQQVLTTTA >Mature_173_residues SVPVSVSVEQIRQHIENNPAAMPSQIAAELNISEFDVVSALPVEQITILPLAEKDALLAELPEWGNMTTIVSASGSIFEF KGSFPKGKYAHGYYNLITKGDGLHGHLKLDVITAIALISKPFRGTESHSINFFGSQGEVVFKVYLGRDKKRVLLPEQVAR FNQLKQQVLTTTA
Specific function: Unknown
COG id: COG3721
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19093; Mature: 18962
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPVSVSVEQIRQHIENNPAAMPSQIAAELNISEFDVVSALPVEQITILPLAEKDALLA CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCCHHHH ELPEWGNMTTIVSASGSIFEFKGSFPKGKYAHGYYNLITKGDGLHGHLKLDVITAIALIS HCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHH KPFRGTESHSINFFGSQGEVVFKVYLGRDKKRVLLPEQVARFNQLKQQVLTTTA CCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVPVSVSVEQIRQHIENNPAAMPSQIAAELNISEFDVVSALPVEQITILPLAEKDALLA CCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCCHHHH ELPEWGNMTTIVSASGSIFEFKGSFPKGKYAHGYYNLITKGDGLHGHLKLDVITAIALIS HCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHH KPFRGTESHSINFFGSQGEVVFKVYLGRDKKRVLLPEQVARFNQLKQQVLTTTA CCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA