| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963141
Identifier: 157963141
GI number: 157963141
Start: 4068513
End: 4069082
Strand: Reverse
Name: 157963141
Synonym: Spea_3325
Alternate gene names: NA
Gene position: 4069082-4068513 (Counterclockwise)
Preceding gene: 157963142
Following gene: 157963140
Centisome position: 78.64
GC content: 45.61
Gene sequence:
>570_bases ATGACTATAGAAAAAGAACAAAGATTACGAGAAAAGCTGTTACCAGAAATTGAAGCTTTTAAGGCTGAGCGCTCAACACT GCAGCTTGCGACTCAGGATGCTGATGGTGTACCTAATGCAAGTTACGCCCCTTTCGCTTTAGCCGATGACGGTTTTTATA TTTTAGTCAGTGAGCTTGCGCGTCATGGCACAAACCTAAAAGCCTCAAAGCAGTTGTCTGTGATGCTGTTAGAAGATGAA GCGGAAGCAAAAACTGTGTTTGCCCGTAAACGTTTGACCTTCGATGCCACTGCAGAATTAGTGGCGCGTGACAGCGAAAC CTTTACCAAAGGGGTTGCAGCATTGTCGGCGCGTTTTGGCGAGATGATCGATAATCTAGCCGGATTGGGCGATTTTAACT TGTTTAAGTTAAATCCACATCACGGTCTGTACGTTAAAGGTTTCGGTCAGGCATTTAGCCTATCAGGTGCGGAGTTGTTG GACGTTGATTGGAAGCGTGATGGCCACCATGGCACTCCAAAGACTGATATAGCACAAGATGATCTGGAGTTAGCTGAAGC TGCTAATTAG
Upstream 100 bases:
>100_bases CTGCCAGAGCAAGTTGCCCGCTTTAATCAATTGAAGCAACAAGTATTAACCACGACCGCTTAAGCTATTCGAATAAACCT TAAAATAAGAGAGTAGAGTA
Downstream 100 bases:
>100_bases GCTTATCACTTATACCATTGTGATTTCGTGATATTAGATTGCGAGCTAAATAAAAGTATTCTGATACAAATAAACATTGC CCGCCTTTGCGCGGGTTTTG
Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELARHGTNLKASKQLSVMLLEDE AEAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFGEMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELL DVDWKRDGHHGTPKTDIAQDDLELAEAAN
Sequences:
>Translated_189_residues MTIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELARHGTNLKASKQLSVMLLEDE AEAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFGEMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELL DVDWKRDGHHGTPKTDIAQDDLELAEAAN >Mature_188_residues TIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELARHGTNLKASKQLSVMLLEDEA EAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFGEMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELLD VDWKRDGHHGTPKTDIAQDDLELAEAAN
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019595 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR014419 [H]
Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 20741; Mature: 20609
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELA CCCCHHHHHHHHHCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHH RHGTNLKASKQLSVMLLEDEAEAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFG HCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH EMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELLDVDWKRDGHHGTPKTDIAQD HHHHHHHCCCCCEEEEECCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCCCHH DLELAEAAN HHHHHHCCC >Mature Secondary Structure TIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELA CCCHHHHHHHHHCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHH RHGTNLKASKQLSVMLLEDEAEAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFG HCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH EMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELLDVDWKRDGHHGTPKTDIAQD HHHHHHHCCCCCEEEEECCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCCCHH DLELAEAAN HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]