Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963141

Identifier: 157963141

GI number: 157963141

Start: 4068513

End: 4069082

Strand: Reverse

Name: 157963141

Synonym: Spea_3325

Alternate gene names: NA

Gene position: 4069082-4068513 (Counterclockwise)

Preceding gene: 157963142

Following gene: 157963140

Centisome position: 78.64

GC content: 45.61

Gene sequence:

>570_bases
ATGACTATAGAAAAAGAACAAAGATTACGAGAAAAGCTGTTACCAGAAATTGAAGCTTTTAAGGCTGAGCGCTCAACACT
GCAGCTTGCGACTCAGGATGCTGATGGTGTACCTAATGCAAGTTACGCCCCTTTCGCTTTAGCCGATGACGGTTTTTATA
TTTTAGTCAGTGAGCTTGCGCGTCATGGCACAAACCTAAAAGCCTCAAAGCAGTTGTCTGTGATGCTGTTAGAAGATGAA
GCGGAAGCAAAAACTGTGTTTGCCCGTAAACGTTTGACCTTCGATGCCACTGCAGAATTAGTGGCGCGTGACAGCGAAAC
CTTTACCAAAGGGGTTGCAGCATTGTCGGCGCGTTTTGGCGAGATGATCGATAATCTAGCCGGATTGGGCGATTTTAACT
TGTTTAAGTTAAATCCACATCACGGTCTGTACGTTAAAGGTTTCGGTCAGGCATTTAGCCTATCAGGTGCGGAGTTGTTG
GACGTTGATTGGAAGCGTGATGGCCACCATGGCACTCCAAAGACTGATATAGCACAAGATGATCTGGAGTTAGCTGAAGC
TGCTAATTAG

Upstream 100 bases:

>100_bases
CTGCCAGAGCAAGTTGCCCGCTTTAATCAATTGAAGCAACAAGTATTAACCACGACCGCTTAAGCTATTCGAATAAACCT
TAAAATAAGAGAGTAGAGTA

Downstream 100 bases:

>100_bases
GCTTATCACTTATACCATTGTGATTTCGTGATATTAGATTGCGAGCTAAATAAAAGTATTCTGATACAAATAAACATTGC
CCGCCTTTGCGCGGGTTTTG

Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELARHGTNLKASKQLSVMLLEDE
AEAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFGEMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELL
DVDWKRDGHHGTPKTDIAQDDLELAEAAN

Sequences:

>Translated_189_residues
MTIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELARHGTNLKASKQLSVMLLEDE
AEAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFGEMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELL
DVDWKRDGHHGTPKTDIAQDDLELAEAAN
>Mature_188_residues
TIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELARHGTNLKASKQLSVMLLEDEA
EAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFGEMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELLD
VDWKRDGHHGTPKTDIAQDDLELAEAAN

Specific function: Unknown

COG id: COG0748

COG function: function code P; Putative heme iron utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019595
- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002
- InterPro:   IPR014419 [H]

Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]

EC number: NA

Molecular weight: Translated: 20741; Mature: 20609

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELA
CCCCHHHHHHHHHCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHH
RHGTNLKASKQLSVMLLEDEAEAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFG
HCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
EMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELLDVDWKRDGHHGTPKTDIAQD
HHHHHHHCCCCCEEEEECCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCCCHH
DLELAEAAN
HHHHHHCCC
>Mature Secondary Structure 
TIEKEQRLREKLLPEIEAFKAERSTLQLATQDADGVPNASYAPFALADDGFYILVSELA
CCCHHHHHHHHHCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHH
RHGTNLKASKQLSVMLLEDEAEAKTVFARKRLTFDATAELVARDSETFTKGVAALSARFG
HCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
EMIDNLAGLGDFNLFKLNPHHGLYVKGFGQAFSLSGAELLDVDWKRDGHHGTPKTDIAQD
HHHHHHHCCCCCEEEEECCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCCCHH
DLELAEAAN
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]