| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963126
Identifier: 157963126
GI number: 157963126
Start: 4053181
End: 4053567
Strand: Reverse
Name: 157963126
Synonym: Spea_3310
Alternate gene names: NA
Gene position: 4053567-4053181 (Counterclockwise)
Preceding gene: 157963130
Following gene: 157963125
Centisome position: 78.34
GC content: 45.22
Gene sequence:
>387_bases ATGATAAATCTAACCAATCAATTTGCGGGTCGTGTCAGTATGTTTGAAAACGGCACTTTTGTTGGCAGTGGCATGGCTAA CCCTTTGGGTAATAGCATCTCATTTACCGATGCTCATGGCGCCTTTGCTGGGCAGGATATCGATAACGTATTTGGGGGAG TAAATCACTTTGACTCCCATGGTCAGTTTGATGGCTTTACTCGGCCAAACGTGTTTGGTGGTGTCGATAGGTATAATGCT AACGGCCAGTTTTCAGGCCATAGCGCCGATACCGCCTTTGGCGCCAATAGTTATGATGCTCAAGGAGGTTTAGATACCTC CTACATAGGTGATATCGATGCGGGTGATAACCTCACCGACTCCATTCTTAACTTTATTAATACCTAA
Upstream 100 bases:
>100_bases CTGAGAGGGTAAGGCAGGTCCTAAGCTCTACAACCTTCACTTGAACACAGTTGTATACAGCTGTATACTTGGGCAATTAA TTCAGAGCATCGACGAAGAT
Downstream 100 bases:
>100_bases CTACAAATTCCTAATTAAAGATAGGGTCGGCAATGAACCAAATTCAGCAATTAGAAGCCGAAGCTTTTACCATTTTAGAC TTACACCTTAAAAACGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MINLTNQFAGRVSMFENGTFVGSGMANPLGNSISFTDAHGAFAGQDIDNVFGGVNHFDSHGQFDGFTRPNVFGGVDRYNA NGQFSGHSADTAFGANSYDAQGGLDTSYIGDIDAGDNLTDSILNFINT
Sequences:
>Translated_128_residues MINLTNQFAGRVSMFENGTFVGSGMANPLGNSISFTDAHGAFAGQDIDNVFGGVNHFDSHGQFDGFTRPNVFGGVDRYNA NGQFSGHSADTAFGANSYDAQGGLDTSYIGDIDAGDNLTDSILNFINT >Mature_128_residues MINLTNQFAGRVSMFENGTFVGSGMANPLGNSISFTDAHGAFAGQDIDNVFGGVNHFDSHGQFDGFTRPNVFGGVDRYNA NGQFSGHSADTAFGANSYDAQGGLDTSYIGDIDAGDNLTDSILNFINT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13444; Mature: 13444
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLTNQFAGRVSMFENGTFVGSGMANPLGNSISFTDAHGAFAGQDIDNVFGGVNHFDSH CCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHCCCCCCCCC GQFDGFTRPNVFGGVDRYNANGQFSGHSADTAFGANSYDAQGGLDTSYIGDIDAGDNLTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH SILNFINT HHHHHHCC >Mature Secondary Structure MINLTNQFAGRVSMFENGTFVGSGMANPLGNSISFTDAHGAFAGQDIDNVFGGVNHFDSH CCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHCCCCCCCCC GQFDGFTRPNVFGGVDRYNANGQFSGHSADTAFGANSYDAQGGLDTSYIGDIDAGDNLTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH SILNFINT HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA