| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963105
Identifier: 157963105
GI number: 157963105
Start: 4032075
End: 4032794
Strand: Reverse
Name: 157963105
Synonym: Spea_3289
Alternate gene names: NA
Gene position: 4032794-4032075 (Counterclockwise)
Preceding gene: 157963106
Following gene: 157963092
Centisome position: 77.93
GC content: 41.39
Gene sequence:
>720_bases ATGGCAAAGGCTTCTAAGATAATGAAAAAACACATTCGCTTAATTAACACGCTATTGAGTGCATCCTTGTTACTGTTAAC CCTTAGTTATACCAGTTTGAGCTATGCCGCTGTCGATGCGGCCAATCTTGAGTTTGTCACTGCAAAGCAGCTAGAGGATA GCATCCAGTTAGATAAGGCCTATGACAAGTTTCAACAGATTGCCGAGCAATATAGCTCATCAACTATTGCGCAACTGAGC AAAATTCGACTCAATGAGTTAAATGGTCAGGTATTTAGAAATGGCGTTAAAGTGGATAACGATAAGTATCCGCAAGATAG TAAATTGGCGTTGGCGAACTCAGTGGTCAAAGCTCTATCGAGTAATGATTACCGATATTTTTTCGCTCATTTAGCCATGC CAGAAGATGGTACTTTATTTTTTACAGGCTTAGACCAAGATGAGTATAACGGCCTCACTAAGCAAATATCTGAGCTGAAG CCGGCTGTTCGCGAACGTTTTATCAATGATTACGCCGCAATTGCGGCGAGCTTAAAAAATGAAACCGATACGACAGTTGC CAGTGCAATCGCTAACGCAAAAGAGAGTCACTTTAGCTTGTCGATAGATGGCTGTGGTTTCAGCGACTCAAGTAATACTT GTTATAACTACAGATCTGAGCAAGGTAACCGCTACATCATCTTAGAGCAAGCGGGTCGATTCTATTTTTCAGGACTTTAA
Upstream 100 bases:
>100_bases TCGAAAAGCAAGTTGCAGTGCTTTATAAAATGCACTGGCAAGACGTTAGAGGGTTTAGATTGATTAAAGCCAATAATAAT TACTATTGGCACCTAAGATA
Downstream 100 bases:
>100_bases TCGCACAGCTGCTTTAAGGCGCCCATAGTTAATGGCATGTTTGCAGACCTCTTGCTCAGCTTTCGATATTACTGTCCCGA GCACAATAAAGCGCAGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MAKASKIMKKHIRLINTLLSASLLLLTLSYTSLSYAAVDAANLEFVTAKQLEDSIQLDKAYDKFQQIAEQYSSSTIAQLS KIRLNELNGQVFRNGVKVDNDKYPQDSKLALANSVVKALSSNDYRYFFAHLAMPEDGTLFFTGLDQDEYNGLTKQISELK PAVRERFINDYAAIAASLKNETDTTVASAIANAKESHFSLSIDGCGFSDSSNTCYNYRSEQGNRYIILEQAGRFYFSGL
Sequences:
>Translated_239_residues MAKASKIMKKHIRLINTLLSASLLLLTLSYTSLSYAAVDAANLEFVTAKQLEDSIQLDKAYDKFQQIAEQYSSSTIAQLS KIRLNELNGQVFRNGVKVDNDKYPQDSKLALANSVVKALSSNDYRYFFAHLAMPEDGTLFFTGLDQDEYNGLTKQISELK PAVRERFINDYAAIAASLKNETDTTVASAIANAKESHFSLSIDGCGFSDSSNTCYNYRSEQGNRYIILEQAGRFYFSGL >Mature_238_residues AKASKIMKKHIRLINTLLSASLLLLTLSYTSLSYAAVDAANLEFVTAKQLEDSIQLDKAYDKFQQIAEQYSSSTIAQLSK IRLNELNGQVFRNGVKVDNDKYPQDSKLALANSVVKALSSNDYRYFFAHLAMPEDGTLFFTGLDQDEYNGLTKQISELKP AVRERFINDYAAIAASLKNETDTTVASAIANAKESHFSLSIDGCGFSDSSNTCYNYRSEQGNRYIILEQAGRFYFSGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26617; Mature: 26486
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKASKIMKKHIRLINTLLSASLLLLTLSYTSLSYAAVDAANLEFVTAKQLEDSIQLDKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH YDKFQQIAEQYSSSTIAQLSKIRLNELNGQVFRNGVKVDNDKYPQDSKLALANSVVKALS HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHC SNDYRYFFAHLAMPEDGTLFFTGLDQDEYNGLTKQISELKPAVRERFINDYAAIAASLKN CCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETDTTVASAIANAKESHFSLSIDGCGFSDSSNTCYNYRSEQGNRYIILEQAGRFYFSGL CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEECCC >Mature Secondary Structure AKASKIMKKHIRLINTLLSASLLLLTLSYTSLSYAAVDAANLEFVTAKQLEDSIQLDKA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH YDKFQQIAEQYSSSTIAQLSKIRLNELNGQVFRNGVKVDNDKYPQDSKLALANSVVKALS HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHC SNDYRYFFAHLAMPEDGTLFFTGLDQDEYNGLTKQISELKPAVRERFINDYAAIAASLKN CCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETDTTVASAIANAKESHFSLSIDGCGFSDSSNTCYNYRSEQGNRYIILEQAGRFYFSGL CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA