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The map label for this gene is yqjE [H]

Identifier: 157963092

GI number: 157963092

Start: 4019346

End: 4020491

Strand: Reverse

Name: yqjE [H]

Synonym: Spea_3276

Alternate gene names: 157963092

Gene position: 4020491-4019346 (Counterclockwise)

Preceding gene: 157963105

Following gene: 157963091

Centisome position: 77.7

GC content: 48.43

Gene sequence:

>1146_bases
ATGATCTTTGTTCGTTTCGCAAAAAGAGTTCGCACACTGATGCCAAATATTAATCAAGAAAGACTCGTTGAACATTTTAT
CTCACTGGTGAGAATCGACAGTGAATCAGGCAATGAAAAAGCGGTGGCAGAGGTGCTAACAGAGCAGCTCGGTCAACTGG
GCTTTGAGGTGACTCAACTTGCTGTACCTAGCGAGATCACTAACGGTTTTAATATCTATGGCAAGTTAACCGGCTCACTT
GAAGGCAGCATCGTTTTCAGTAGCCATATGGATACTGTGACACCGGGTATTGGTATTGAACCGATTATTGAAGATGGCAT
TATTCGCTCTAAAGGCGACACCATTCTAGGCGGCGATGATAAATCGGGTATTGCGGCTGTGATGGAGGCGGTTCGCAGCA
TTCAAGAGCGCGGCGAAGCCCATAAAACCATTGAAGTGGCGTTTACTGTGTATGAAGAACGTGGCATGCATGGTGCTAAG
AATTTTGATATCAGTAAGATTGAATCTAGCCAAGCTATCGTGCTCGATTCTGGCGGCCCTATTGGCACCATTATCACCAC
GGCGCCGGGCCAGCAAAGCCTAAAAGTGACCATCAAGGGTAAACCTGCCCATGCGGGTCTTGAGCCTGAGGCTGGGATTA
ACGCGTTAACGGTTGCTGCAGATGCCATCAGCAAAATGCAGTTGAGCCGTATCGATGATGAAACCACGGCTAACATTGGT
GTAGTGCAAGGAGGCCAGGCAACCAATATCGTGATGCCTGAGCTGTATATTGAGGCGGAAGCGCGCTCACTCGATGATGA
CAAGCTGGCAAAGCAAGTGGCGCATATGGTGTCGACCTTTGAGGCGGCGGCGCAAAAGCATGGCGCTAGCGTTGAGATTG
ATTCGACTCGCTCTTATAACGCTTATCATATTGCGGATGATGACGCCCATGTGGTTGAGGTTAAAAATACATTTGCCGCC
ATAGGCATTGAGGCTATGACTAAACCTACTGGCGGTGGATCTGACGCCAATATCTTTAACGCGAATGGCTTAAAGACGGT
TAACTTGTCGACGGGGATGTCGAAAGTTCACACCACTGATGAGTTCATCGCGGTAGCCGATTTGGCCGCAATCACTGAAT
TCGTTCACTGTTATCTGACCCGCTAA

Upstream 100 bases:

>100_bases
ACCCATCAATAAGCAATTAAATGACTCTAAGTTAGTGATCACTTATTCTTTCTAGCATTTCTTTGATGTAACCCAGCGAT
ACAGTGCGCTACTAAGGTTT

Downstream 100 bases:

>100_bases
CATAACAATGGCCGGCTTTAGTCGCCGGCCTTGTTTTCATTACAATCATACTTCGCGATAACGGTTAGCCCCTTCATATA
AGACAGCTTGTTTACCTTCT

Product: peptidase T-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MIFVRFAKRVRTLMPNINQERLVEHFISLVRIDSESGNEKAVAEVLTEQLGQLGFEVTQLAVPSEITNGFNIYGKLTGSL
EGSIVFSSHMDTVTPGIGIEPIIEDGIIRSKGDTILGGDDKSGIAAVMEAVRSIQERGEAHKTIEVAFTVYEERGMHGAK
NFDISKIESSQAIVLDSGGPIGTIITTAPGQQSLKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIG
VVQGGQATNIVMPELYIEAEARSLDDDKLAKQVAHMVSTFEAAAQKHGASVEIDSTRSYNAYHIADDDAHVVEVKNTFAA
IGIEAMTKPTGGGSDANIFNANGLKTVNLSTGMSKVHTTDEFIAVADLAAITEFVHCYLTR

Sequences:

>Translated_381_residues
MIFVRFAKRVRTLMPNINQERLVEHFISLVRIDSESGNEKAVAEVLTEQLGQLGFEVTQLAVPSEITNGFNIYGKLTGSL
EGSIVFSSHMDTVTPGIGIEPIIEDGIIRSKGDTILGGDDKSGIAAVMEAVRSIQERGEAHKTIEVAFTVYEERGMHGAK
NFDISKIESSQAIVLDSGGPIGTIITTAPGQQSLKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIG
VVQGGQATNIVMPELYIEAEARSLDDDKLAKQVAHMVSTFEAAAQKHGASVEIDSTRSYNAYHIADDDAHVVEVKNTFAA
IGIEAMTKPTGGGSDANIFNANGLKTVNLSTGMSKVHTTDEFIAVADLAAITEFVHCYLTR
>Mature_381_residues
MIFVRFAKRVRTLMPNINQERLVEHFISLVRIDSESGNEKAVAEVLTEQLGQLGFEVTQLAVPSEITNGFNIYGKLTGSL
EGSIVFSSHMDTVTPGIGIEPIIEDGIIRSKGDTILGGDDKSGIAAVMEAVRSIQERGEAHKTIEVAFTVYEERGMHGAK
NFDISKIESSQAIVLDSGGPIGTIITTAPGQQSLKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIG
VVQGGQATNIVMPELYIEAEARSLDDDKLAKQVAHMVSTFEAAAQKHGASVEIDSTRSYNAYHIADDDAHVVEVKNTFAA
IGIEAMTKPTGGGSDANIFNANGLKTVNLSTGMSKVHTTDEFIAVADLAAITEFVHCYLTR

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=399, Percent_Identity=24.812030075188, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4

Molecular weight: Translated: 40639; Mature: 40639

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVRFAKRVRTLMPNINQERLVEHFISLVRIDSESGNEKAVAEVLTEQLGQLGFEVTQL
CEEHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
AVPSEITNGFNIYGKLTGSLEGSIVFSSHMDTVTPGIGIEPIIEDGIIRSKGDTILGGDD
ECCHHHCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHCCEEECCCCEEECCCC
KSGIAAVMEAVRSIQERGEAHKTIEVAFTVYEERGMHGAKNFDISKIESSQAIVLDSGGP
CCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHCCCCCCCCCCCEEECCCCEEEEECCCC
IGTIITTAPGQQSLKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIG
EEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEE
VVQGGQATNIVMPELYIEAEARSLDDDKLAKQVAHMVSTFEAAAQKHGASVEIDSTRSYN
EEECCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
AYHIADDDAHVVEVKNTFAAIGIEAMTKPTGGGSDANIFNANGLKTVNLSTGMSKVHTTD
EEEECCCCCEEEEECCHHHHHCHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCHHCCCH
EFIAVADLAAITEFVHCYLTR
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFVRFAKRVRTLMPNINQERLVEHFISLVRIDSESGNEKAVAEVLTEQLGQLGFEVTQL
CEEHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
AVPSEITNGFNIYGKLTGSLEGSIVFSSHMDTVTPGIGIEPIIEDGIIRSKGDTILGGDD
ECCHHHCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHCCEEECCCCEEECCCC
KSGIAAVMEAVRSIQERGEAHKTIEVAFTVYEERGMHGAKNFDISKIESSQAIVLDSGGP
CCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHCCCCCCCCCCCEEECCCCEEEEECCCC
IGTIITTAPGQQSLKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIG
EEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEE
VVQGGQATNIVMPELYIEAEARSLDDDKLAKQVAHMVSTFEAAAQKHGASVEIDSTRSYN
EEECCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
AYHIADDDAHVVEVKNTFAAIGIEAMTKPTGGGSDANIFNANGLKTVNLSTGMSKVHTTD
EEEECCCCCEEEEECCHHHHHCHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCHHCCCH
EFIAVADLAAITEFVHCYLTR
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]