| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963081
Identifier: 157963081
GI number: 157963081
Start: 4004145
End: 4005233
Strand: Reverse
Name: 157963081
Synonym: Spea_3264
Alternate gene names: NA
Gene position: 4005233-4004145 (Counterclockwise)
Preceding gene: 157963082
Following gene: 157963080
Centisome position: 77.4
GC content: 45.36
Gene sequence:
>1089_bases ATGTCCCTTAGCCATCAGCAAAAAGTGTACATTCCCAAGGACGTACGAGCCAATCAATATATCACCGCAGAGATTAAAGT AACGGATGCGTTGCTGGCCCATTATCCCGATTACAAAACCTGTTATCAGACCCTTAGCCGCGCTATTTTCAGCCTTGGTG AGCAAGAAGAGTTATATAACCTGCATGTGATCACTAACGATAAGTTACCTGTAGTACGTTTTCACTCTGAGGCGTATTGC TTCCCAACCGAAGAGCAGATCATCTTCTTCTATAATCCTGAGTACCATGAAGCCCAAAGCCTTCATAGTAAAGATGATTA CCGCGCCAGAAAAATTAGGATCGCATTCTTAGCAACCGGTGACGAAATTCGCAGTAACTCTGCTAATTTTCATATTCGGG TGCAGACTTTCCTCGGCAAACTTTTACCTCAGCTGCCGGAGAAAGGTCTCACCATCAAGATCCGCGATCATCAACACCTA TCATATGATCTGTTTGCCAAAGCCAAGGGCAATAAAGAGAGCTATGGCTACAAGCTACGCTCGATTAGCGACAGATATAG AGCAAGACAGTGTCCGATCCCTGAAGCACACGGTTCACTGTGCTATGTCACGGTAAAGCTGCCTTTGAGTCGTAAGCTTA AGCAGGCTATGTTGCCAGAGCATACAGATGACTTTACCCCGCTGTATCAGAAGCTTGAGGATGCATTTGTGCAGGCGGCT TCAGCTAAACAGCTTAAGCGAATTGCAATGGTTGCTAATGGGTTAACCCCGCTTGTACGTAACAGTAAATTCGATCAAGT TGATGGTACTGACGAGGTACAAATGCTTGGCTTCGATCCGAATATAGAAGAGCAGCAGTTTATTCGTCACTGGGACGGCA ATAAGTTAGTCGAGATGGTGAGTTTTACTATCGCCGCAGGTATTAACGACTGTAAAGATGGCGCGCTTGGCCGTTATTTG AATCGAGTTGAAGATGCGCTAAGAAGCATGACATCTGAATTAGCGTTAGATAAGTCACGGGATGAGCTTATAGTGCGGTT CCATCAGCACATTAGTTATCAAGCCCCAGAGCAGCTTACTTGCGAGTAA
Upstream 100 bases:
>100_bases TCAAGTATTAGAAATGTGTCCTGTCGCAGCAAACTCGTCATAAATAGTCGCTAGTATAGGCACCGAACTAGGCATGGTTA ACTTATCACAAGGAGTATTT
Downstream 100 bases:
>100_bases GCGTCTTCACAAGTTGGTCAATTAAGCCCATCTAGTATTATGTGCTTTTCACATTAGCGACGCGAGTGGTTGTGTGAAAA GCTCTTATTGGCTGATGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MSLSHQQKVYIPKDVRANQYITAEIKVTDALLAHYPDYKTCYQTLSRAIFSLGEQEELYNLHVITNDKLPVVRFHSEAYC FPTEEQIIFFYNPEYHEAQSLHSKDDYRARKIRIAFLATGDEIRSNSANFHIRVQTFLGKLLPQLPEKGLTIKIRDHQHL SYDLFAKAKGNKESYGYKLRSISDRYRARQCPIPEAHGSLCYVTVKLPLSRKLKQAMLPEHTDDFTPLYQKLEDAFVQAA SAKQLKRIAMVANGLTPLVRNSKFDQVDGTDEVQMLGFDPNIEEQQFIRHWDGNKLVEMVSFTIAAGINDCKDGALGRYL NRVEDALRSMTSELALDKSRDELIVRFHQHISYQAPEQLTCE
Sequences:
>Translated_362_residues MSLSHQQKVYIPKDVRANQYITAEIKVTDALLAHYPDYKTCYQTLSRAIFSLGEQEELYNLHVITNDKLPVVRFHSEAYC FPTEEQIIFFYNPEYHEAQSLHSKDDYRARKIRIAFLATGDEIRSNSANFHIRVQTFLGKLLPQLPEKGLTIKIRDHQHL SYDLFAKAKGNKESYGYKLRSISDRYRARQCPIPEAHGSLCYVTVKLPLSRKLKQAMLPEHTDDFTPLYQKLEDAFVQAA SAKQLKRIAMVANGLTPLVRNSKFDQVDGTDEVQMLGFDPNIEEQQFIRHWDGNKLVEMVSFTIAAGINDCKDGALGRYL NRVEDALRSMTSELALDKSRDELIVRFHQHISYQAPEQLTCE >Mature_361_residues SLSHQQKVYIPKDVRANQYITAEIKVTDALLAHYPDYKTCYQTLSRAIFSLGEQEELYNLHVITNDKLPVVRFHSEAYCF PTEEQIIFFYNPEYHEAQSLHSKDDYRARKIRIAFLATGDEIRSNSANFHIRVQTFLGKLLPQLPEKGLTIKIRDHQHLS YDLFAKAKGNKESYGYKLRSISDRYRARQCPIPEAHGSLCYVTVKLPLSRKLKQAMLPEHTDDFTPLYQKLEDAFVQAAS AKQLKRIAMVANGLTPLVRNSKFDQVDGTDEVQMLGFDPNIEEQQFIRHWDGNKLVEMVSFTIAAGINDCKDGALGRYLN RVEDALRSMTSELALDKSRDELIVRFHQHISYQAPEQLTCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41724; Mature: 41593
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSHQQKVYIPKDVRANQYITAEIKVTDALLAHYPDYKTCYQTLSRAIFSLGEQEELYN CCCCCCCEEECCCCCCCCCEEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEE LHVITNDKLPVVRFHSEAYCFPTEEQIIFFYNPEYHEAQSLHSKDDYRARKIRIAFLATG EEEEECCCCEEEEECCCEEECCCCCCEEEEECCCHHHHHHHCCCCCCCEEEEEEEEEECC DEIRSNSANFHIRVQTFLGKLLPQLPEKGLTIKIRDHQHLSYDLFAKAKGNKESYGYKLR HHHHCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCHHHCEEHH SISDRYRARQCPIPEAHGSLCYVTVKLPLSRKLKQAMLPEHTDDFTPLYQKLEDAFVQAA HHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SAKQLKRIAMVANGLTPLVRNSKFDQVDGTDEVQMLGFDPNIEEQQFIRHWDGNKLVEMV HHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCHHHHHH SFTIAAGINDCKDGALGRYLNRVEDALRSMTSELALDKSRDELIVRFHQHISYQAPEQLT HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC CE CC >Mature Secondary Structure SLSHQQKVYIPKDVRANQYITAEIKVTDALLAHYPDYKTCYQTLSRAIFSLGEQEELYN CCCCCCEEECCCCCCCCCEEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEE LHVITNDKLPVVRFHSEAYCFPTEEQIIFFYNPEYHEAQSLHSKDDYRARKIRIAFLATG EEEEECCCCEEEEECCCEEECCCCCCEEEEECCCHHHHHHHCCCCCCCEEEEEEEEEECC DEIRSNSANFHIRVQTFLGKLLPQLPEKGLTIKIRDHQHLSYDLFAKAKGNKESYGYKLR HHHHCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCHHHCEEHH SISDRYRARQCPIPEAHGSLCYVTVKLPLSRKLKQAMLPEHTDDFTPLYQKLEDAFVQAA HHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SAKQLKRIAMVANGLTPLVRNSKFDQVDGTDEVQMLGFDPNIEEQQFIRHWDGNKLVEMV HHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCHHHHHH SFTIAAGINDCKDGALGRYLNRVEDALRSMTSELALDKSRDELIVRFHQHISYQAPEQLT HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC CE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA