| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963080
Identifier: 157963080
GI number: 157963080
Start: 4000859
End: 4002826
Strand: Reverse
Name: 157963080
Synonym: Spea_3263
Alternate gene names: NA
Gene position: 4002826-4000859 (Counterclockwise)
Preceding gene: 157963081
Following gene: 157963076
Centisome position: 77.36
GC content: 44.97
Gene sequence:
>1968_bases ATGATGAGTTTAAATAAACGCTATTTAGTATTAGCGGTTGCAGCAGCAATGGGCCTAAGTGCATGTGGTGATGATGGTAA AGATGGCACCGATGGCGAGTATATCCCTCCCACCATTGGCAGTTCTGTAGAAACTAAAATTGAGTTAATAAATCATACCA TAGAAGATGGTCAAATTAGCTTCGAGTTTCAGGCTATTAATGAAGACGGTGTAATAATAGAGGGCCTGCAAAAGGCTGAA GCTAAGTTCGCCATACAAACTGAAAAAGGTATTGGATTAAGTCGTTCAGGTGAAGGCACTCTTGGCGGCTATGGCACTTT TGATGCGACAAAAGATAGCAATCCTGAAGGCGCCTCATTAGCTATTAATGAAGCGGGTAATTATAGCTTTGTTATGCCGA TGGAGCATGTGAAGGCGGGAGACACAGGGATTGTTTGGTTGCGCGTCGGAGGAGCTGAAGTTAATGATACTGTTTCGATT GCCCGCAGTATGCCACTAATCGTCGACAAACCTGATGCATTGCATACAACAACCACAGAGACCTGCTATTCATGCCATGT GGATTACGGTACATCTGATTTCCCTCATCCTAGTTATACGGCTATCGATCTAGAGGGCAAGGTCGATTTCGTTGCAGGTT GTATGGTCTGTCATGGCAATATTTCCCGTAATGAGGAAAATGGTGGTTATGCGAAAAATACTCTGCAAAAAATAGGTCAT ATTAATCATCAATCATTCGAACGTGATTTCCAAGTGACTAACTGCTCTACCTGCCACGCAGAGCCTGTAATGAACACGAG CATAGCGGGTAATGGCTGTGTTGATTGTCACGCATCGGGCGCCGTCCTGAATGATAAGATTGCCGCTTTTGCCGACGATG TCGATGTACGCGAACTCCACGCGACTAAATCAGGGCTTGTAGAGCGTCAACAGATCCGCGAGTCACATACTACGACCCTA TCAGCCCCTTACTGGGACAAGGATGTTACTTGGACTGATAAACCAACAGGAGCTGTTTGTACTGACCTGAAGTTGTTTAA AATCGAAGGTGAAACTCAAACTCAGCTTAATATTGCTAATTTATATGGCGATAAGTTGAGCTATGCAGGCGCTTATATTC ATGGTTATGACAGTAAGCACAATACCCTTGTTGGTAGAGCCAATGCCTATGGTGCTCATCAATATGTTGAGCGTGAAGAC GGTACGCGTTCAGTCTGTTACCCAGATCTTGTAACGGGTTTTGCAAACTCAAATCTATCTGCGAGCTCTAGAGTCACCTT TGACATGAATGACGGTATGGACCCGGGCTATTCCGGCGTGACATTGACATCTTATTCAGATGTTGTTTCGACTGATATTT ATGATCCTGCGGTTACAGTGCCAACATTTACACCTGAAGGTAAGTATGATCGTCGTCTTGCTGTCACCAATGATAGTTGT ACTAGCTGTCATAACAGTGAGAGTAACTATCATAAAAATGGTAGCTATCAAGAGGGGGGCATAGATTGTGTTGCGTGTCA TAACAATGGCCAAGACCGCAAGTCAAAAATGTCTGCACCAGGATTTGGTCCTATGGTCCACAGCATGCATTGGGGGGTAG GCAACACGGTAAATGATGACGATGGCATTGCTAACTCAGCTGCTAAGCTTAATGCTGAAAACTGTGTCGCATGTCACGCC GATGGTATCGACCTTTATGCCGTACCAAACCAGTATATTCGTTCACAAGCTTATCACGCTGGCGATACCACTAAGATGTC TAGCCCAGTATTAGCTAACTGTTATGCCTGTCATGACAGCGACCAAGCTTTAAACCATATGGTTCAAAATGGCGGAGAGC TAAGTGCCGAGAAAGGTGCTGGTGATGATGGTGAGTGGTACACAGCGCCAACATCTGAATCTTGTGCAACCTGTCACGCC ACAGGTAAGACATTTGCCATCGAGAAATACCACGTGTTTGAGCGGTAG
Upstream 100 bases:
>100_bases TGTTTTTACGCTTTATTAGTGGTGCCTAGTTCACAATTTTATTTGTAATAAGTAAATACTATTTTCAAGCAATAAAAACA ACAATACTATTAGGATGACT
Downstream 100 bases:
>100_bases GTAAGCGTGTATTGGGCTGACAGGTAACTCTGGTCGGTATCTGACGCACTTCACCCTTAGCATGTCCCTGCAGATTGTCT AAAGGTAGATAGTGGAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Decaheme Cytochrome C
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQISFEFQAINEDGVIIEGLQKAE AKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASLAINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSI ARSMPLIVDKPDALHTTTTETCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELHATKSGLVERQQIRESHTTTL SAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIANLYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVERED GTRSVCYPDLVTGFANSNLSASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDDDGIANSAAKLNAENCVACHA DGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDSDQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHA TGKTFAIEKYHVFER
Sequences:
>Translated_655_residues MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQISFEFQAINEDGVIIEGLQKAE AKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASLAINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSI ARSMPLIVDKPDALHTTTTETCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELHATKSGLVERQQIRESHTTTL SAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIANLYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVERED GTRSVCYPDLVTGFANSNLSASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDDDGIANSAAKLNAENCVACHA DGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDSDQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHA TGKTFAIEKYHVFER >Mature_655_residues MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQISFEFQAINEDGVIIEGLQKAE AKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASLAINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSI ARSMPLIVDKPDALHTTTTETCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELHATKSGLVERQQIRESHTTTL SAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIANLYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVERED GTRSVCYPDLVTGFANSNLSASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDDDGIANSAAKLNAENCVACHA DGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDSDQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHA TGKTFAIEKYHVFER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70435; Mature: 70435
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQIS CCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE FEFQAINEDGVIIEGLQKAEAKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASL EEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSIARSMPLIVDKPDALHTTTTE EEECCCCEEEEEEHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCC TCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH CEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHC INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELH CCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCHHHHHCCCCHHHHH ATKSGLVERQQIRESHTTTLSAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIAN HHHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCEECCEEEEEECCCCCCEEEEEH LYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVEREDGTRSVCYPDLVTGFANSNLS HCCCCHHHCEEEEEECCCCCCEEEECCCCCCCHHHHHCCCCCCCEECHHHHHHHCCCCCC ASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC CCCEEEEECCCCCCCCCCCEEEECCHHHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCC TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDD CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCHHHHHEECCCCCCCCCC DGIANSAAKLNAENCVACHADGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDS CCCCCCHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC DQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHATGKTFAIEKYHVFER HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCEEEEEEEEECCC >Mature Secondary Structure MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQIS CCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE FEFQAINEDGVIIEGLQKAEAKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASL EEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSIARSMPLIVDKPDALHTTTTE EEECCCCEEEEEEHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCC TCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH CEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHC INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELH CCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCHHHHHCCCCHHHHH ATKSGLVERQQIRESHTTTLSAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIAN HHHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCEECCEEEEEECCCCCCEEEEEH LYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVEREDGTRSVCYPDLVTGFANSNLS HCCCCHHHCEEEEEECCCCCCEEEECCCCCCCHHHHHCCCCCCCEECHHHHHHHCCCCCC ASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC CCCEEEEECCCCCCCCCCCEEEECCHHHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCC TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDD CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCHHHHHEECCCCCCCCCC DGIANSAAKLNAENCVACHADGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDS CCCCCCHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC DQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHATGKTFAIEKYHVFER HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA