Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963080

Identifier: 157963080

GI number: 157963080

Start: 4000859

End: 4002826

Strand: Reverse

Name: 157963080

Synonym: Spea_3263

Alternate gene names: NA

Gene position: 4002826-4000859 (Counterclockwise)

Preceding gene: 157963081

Following gene: 157963076

Centisome position: 77.36

GC content: 44.97

Gene sequence:

>1968_bases
ATGATGAGTTTAAATAAACGCTATTTAGTATTAGCGGTTGCAGCAGCAATGGGCCTAAGTGCATGTGGTGATGATGGTAA
AGATGGCACCGATGGCGAGTATATCCCTCCCACCATTGGCAGTTCTGTAGAAACTAAAATTGAGTTAATAAATCATACCA
TAGAAGATGGTCAAATTAGCTTCGAGTTTCAGGCTATTAATGAAGACGGTGTAATAATAGAGGGCCTGCAAAAGGCTGAA
GCTAAGTTCGCCATACAAACTGAAAAAGGTATTGGATTAAGTCGTTCAGGTGAAGGCACTCTTGGCGGCTATGGCACTTT
TGATGCGACAAAAGATAGCAATCCTGAAGGCGCCTCATTAGCTATTAATGAAGCGGGTAATTATAGCTTTGTTATGCCGA
TGGAGCATGTGAAGGCGGGAGACACAGGGATTGTTTGGTTGCGCGTCGGAGGAGCTGAAGTTAATGATACTGTTTCGATT
GCCCGCAGTATGCCACTAATCGTCGACAAACCTGATGCATTGCATACAACAACCACAGAGACCTGCTATTCATGCCATGT
GGATTACGGTACATCTGATTTCCCTCATCCTAGTTATACGGCTATCGATCTAGAGGGCAAGGTCGATTTCGTTGCAGGTT
GTATGGTCTGTCATGGCAATATTTCCCGTAATGAGGAAAATGGTGGTTATGCGAAAAATACTCTGCAAAAAATAGGTCAT
ATTAATCATCAATCATTCGAACGTGATTTCCAAGTGACTAACTGCTCTACCTGCCACGCAGAGCCTGTAATGAACACGAG
CATAGCGGGTAATGGCTGTGTTGATTGTCACGCATCGGGCGCCGTCCTGAATGATAAGATTGCCGCTTTTGCCGACGATG
TCGATGTACGCGAACTCCACGCGACTAAATCAGGGCTTGTAGAGCGTCAACAGATCCGCGAGTCACATACTACGACCCTA
TCAGCCCCTTACTGGGACAAGGATGTTACTTGGACTGATAAACCAACAGGAGCTGTTTGTACTGACCTGAAGTTGTTTAA
AATCGAAGGTGAAACTCAAACTCAGCTTAATATTGCTAATTTATATGGCGATAAGTTGAGCTATGCAGGCGCTTATATTC
ATGGTTATGACAGTAAGCACAATACCCTTGTTGGTAGAGCCAATGCCTATGGTGCTCATCAATATGTTGAGCGTGAAGAC
GGTACGCGTTCAGTCTGTTACCCAGATCTTGTAACGGGTTTTGCAAACTCAAATCTATCTGCGAGCTCTAGAGTCACCTT
TGACATGAATGACGGTATGGACCCGGGCTATTCCGGCGTGACATTGACATCTTATTCAGATGTTGTTTCGACTGATATTT
ATGATCCTGCGGTTACAGTGCCAACATTTACACCTGAAGGTAAGTATGATCGTCGTCTTGCTGTCACCAATGATAGTTGT
ACTAGCTGTCATAACAGTGAGAGTAACTATCATAAAAATGGTAGCTATCAAGAGGGGGGCATAGATTGTGTTGCGTGTCA
TAACAATGGCCAAGACCGCAAGTCAAAAATGTCTGCACCAGGATTTGGTCCTATGGTCCACAGCATGCATTGGGGGGTAG
GCAACACGGTAAATGATGACGATGGCATTGCTAACTCAGCTGCTAAGCTTAATGCTGAAAACTGTGTCGCATGTCACGCC
GATGGTATCGACCTTTATGCCGTACCAAACCAGTATATTCGTTCACAAGCTTATCACGCTGGCGATACCACTAAGATGTC
TAGCCCAGTATTAGCTAACTGTTATGCCTGTCATGACAGCGACCAAGCTTTAAACCATATGGTTCAAAATGGCGGAGAGC
TAAGTGCCGAGAAAGGTGCTGGTGATGATGGTGAGTGGTACACAGCGCCAACATCTGAATCTTGTGCAACCTGTCACGCC
ACAGGTAAGACATTTGCCATCGAGAAATACCACGTGTTTGAGCGGTAG

Upstream 100 bases:

>100_bases
TGTTTTTACGCTTTATTAGTGGTGCCTAGTTCACAATTTTATTTGTAATAAGTAAATACTATTTTCAAGCAATAAAAACA
ACAATACTATTAGGATGACT

Downstream 100 bases:

>100_bases
GTAAGCGTGTATTGGGCTGACAGGTAACTCTGGTCGGTATCTGACGCACTTCACCCTTAGCATGTCCCTGCAGATTGTCT
AAAGGTAGATAGTGGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Decaheme Cytochrome C

Number of amino acids: Translated: 655; Mature: 655

Protein sequence:

>655_residues
MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQISFEFQAINEDGVIIEGLQKAE
AKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASLAINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSI
ARSMPLIVDKPDALHTTTTETCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELHATKSGLVERQQIRESHTTTL
SAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIANLYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVERED
GTRSVCYPDLVTGFANSNLSASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDDDGIANSAAKLNAENCVACHA
DGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDSDQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHA
TGKTFAIEKYHVFER

Sequences:

>Translated_655_residues
MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQISFEFQAINEDGVIIEGLQKAE
AKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASLAINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSI
ARSMPLIVDKPDALHTTTTETCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELHATKSGLVERQQIRESHTTTL
SAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIANLYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVERED
GTRSVCYPDLVTGFANSNLSASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDDDGIANSAAKLNAENCVACHA
DGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDSDQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHA
TGKTFAIEKYHVFER
>Mature_655_residues
MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQISFEFQAINEDGVIIEGLQKAE
AKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASLAINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSI
ARSMPLIVDKPDALHTTTTETCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELHATKSGLVERQQIRESHTTTL
SAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIANLYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVERED
GTRSVCYPDLVTGFANSNLSASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDDDGIANSAAKLNAENCVACHA
DGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDSDQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHA
TGKTFAIEKYHVFER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70435; Mature: 70435

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQIS
CCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE
FEFQAINEDGVIIEGLQKAEAKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASL
EEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
AINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSIARSMPLIVDKPDALHTTTTE
EEECCCCEEEEEEHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCC
TCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
CEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHC
INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELH
CCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCHHHHHCCCCHHHHH
ATKSGLVERQQIRESHTTTLSAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIAN
HHHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCEECCEEEEEECCCCCCEEEEEH
LYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVEREDGTRSVCYPDLVTGFANSNLS
HCCCCHHHCEEEEEECCCCCCEEEECCCCCCCHHHHHCCCCCCCEECHHHHHHHCCCCCC
ASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC
CCCEEEEECCCCCCCCCCCEEEECCHHHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDD
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCHHHHHEECCCCCCCCCC
DGIANSAAKLNAENCVACHADGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDS
CCCCCCHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC
DQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHATGKTFAIEKYHVFER
HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCEEEEEEEEECCC
>Mature Secondary Structure
MMSLNKRYLVLAVAAAMGLSACGDDGKDGTDGEYIPPTIGSSVETKIELINHTIEDGQIS
CCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE
FEFQAINEDGVIIEGLQKAEAKFAIQTEKGIGLSRSGEGTLGGYGTFDATKDSNPEGASL
EEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
AINEAGNYSFVMPMEHVKAGDTGIVWLRVGGAEVNDTVSIARSMPLIVDKPDALHTTTTE
EEECCCCEEEEEEHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCC
TCYSCHVDYGTSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
CEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHC
INHQSFERDFQVTNCSTCHAEPVMNTSIAGNGCVDCHASGAVLNDKIAAFADDVDVRELH
CCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCHHHHHCCCCHHHHH
ATKSGLVERQQIRESHTTTLSAPYWDKDVTWTDKPTGAVCTDLKLFKIEGETQTQLNIAN
HHHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCEECCEEEEEECCCCCCEEEEEH
LYGDKLSYAGAYIHGYDSKHNTLVGRANAYGAHQYVEREDGTRSVCYPDLVTGFANSNLS
HCCCCHHHCEEEEEECCCCCCEEEECCCCCCCHHHHHCCCCCCCEECHHHHHHHCCCCCC
ASSRVTFDMNDGMDPGYSGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYDRRLAVTNDSC
CCCEEEEECCCCCCCCCCCEEEECCHHHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGVGNTVNDD
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCHHHHHEECCCCCCCCCC
DGIANSAAKLNAENCVACHADGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDS
CCCCCCHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC
DQALNHMVQNGGELSAEKGAGDDGEWYTAPTSESCATCHATGKTFAIEKYHVFER
HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA