| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963071
Identifier: 157963071
GI number: 157963071
Start: 3992926
End: 3993156
Strand: Reverse
Name: 157963071
Synonym: Spea_3254
Alternate gene names: NA
Gene position: 3993156-3992926 (Counterclockwise)
Preceding gene: 157963072
Following gene: 157963070
Centisome position: 77.17
GC content: 42.42
Gene sequence:
>231_bases GTGACAGACCAAAAGCTCATCTTGCTCCTTAAGACCTGCATCAGCATGGGTATTTGTCTCATTCTTACTGGTATCTATCT GCATAACTTTAATGAAACTGTTGAAGCTATGGGCGTCAAGGGGATCATCATCAGCGCGATGTGTGTGGCCTTTGGTATGG TGTTGTCATTGCCGACTAAAATGTACCTGACCTTTATCTTAGTTAAACGCGAAGCCGATAAGAATCAATAA
Upstream 100 bases:
>100_bases TCAGCCTTGCGTCTTGATCTCAATCAAGGTGTAAGGCTGAAGAATCACTCACTATATTAGTCTAAACTTATGCATTGTGG ATGCAGATAAGGAGGCTATA
Downstream 100 bases:
>100_bases GCTAGCCCTTTCTACAGCTGCTGCCTCTCTGTCTTAGTTCTATGCAGCTATTGCATTTCATTGTGGCAAATCTGAGCTTT TGTGTAATTAACCCAAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MTDQKLILLLKTCISMGICLILTGIYLHNFNETVEAMGVKGIIISAMCVAFGMVLSLPTKMYLTFILVKREADKNQ
Sequences:
>Translated_76_residues MTDQKLILLLKTCISMGICLILTGIYLHNFNETVEAMGVKGIIISAMCVAFGMVLSLPTKMYLTFILVKREADKNQ >Mature_75_residues TDQKLILLLKTCISMGICLILTGIYLHNFNETVEAMGVKGIIISAMCVAFGMVLSLPTKMYLTFILVKREADKNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8455; Mature: 8323
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 11.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQKLILLLKTCISMGICLILTGIYLHNFNETVEAMGVKGIIISAMCVAFGMVLSLPTK CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHH MYLTFILVKREADKNQ HHHHHHHHHCCCCCCC >Mature Secondary Structure TDQKLILLLKTCISMGICLILTGIYLHNFNETVEAMGVKGIIISAMCVAFGMVLSLPTK CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHH MYLTFILVKREADKNQ HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA