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The map label for this gene is ycaO [H]

Identifier: 157963070

GI number: 157963070

Start: 3990520

End: 3992706

Strand: Reverse

Name: ycaO [H]

Synonym: Spea_3253

Alternate gene names: 157963070

Gene position: 3992706-3990520 (Counterclockwise)

Preceding gene: 157963071

Following gene: 157963069

Centisome position: 77.16

GC content: 47.33

Gene sequence:

>2187_bases
ATGGAAATCAAAGTTAACTTTCTCGACAACTTGAGACTCGAAGCCAAGTTCGACGACTTTACCGTCACCGCCGACCAGCC
AATCCGCTATAAAGGCGATGGCTCAGCACCGAGCCCATTTGATTATTTCTTAGCATCATCAGCTTTGTGTGCGGCTTACT
TTATCAAGGTGTACTGCAAGGCTCGCGATATTCCGACTGAAAACATTCGCTTGTCGCAGAACAACATAGTCGACCCTGAA
GATCGCTATAACCAGATCTTCCAAATTCAAGTTGAGCTACCAGACGATATTTCGGATAAAGACCGTCAAGGGATTTTGCG
CTCGATTGAACGTTGTACCGTGAAAAAAGTGGTACAAACCGGACCAGAATTTAAGATTGAAACCGTTGAAAACCTAGATG
CCGACGCTAACGCCATGTTGATGGGCCAAAGCGATAGCGATGCGAGCACTTACATCTTAGGTAAAGACCTGCCGCTTGAG
CAAACCATTGCCAACATGACGGGGATGCTTGCTGATTTAGGCATGAAGATTGAGATCTCTTCTTGGCGCAATATCGTGCC
AAACGTATGGTCGCTGCATATCCGTGATGCGGCGTCACCTATGTGCTTTACCAATGGTAAAGGCGCGACTAAAGAGAGCG
CACTTTGCTCGGCATTAGGCGAGTTTATTGAGCGTCTAAACTGCAACTTCTTCTACAATGACCAATTCTTCGGTGAAGAG
ATTGCTAACAGCGAATTTGTGCATTACCCGAACGAGAAATGGTTCGAGTTAGAAGATGATGACTCATTGCCTGCTGGCAT
GCTCGATGATTACTGTCTAGCTATCTACAACCCAGAAGGTGAGCTAGGTGGTTCGAACCTTATCGATACCAACTCGGGTA
ATATCGACCGCGGCATCTGTACTATTCCATACACGCGTCACTCAGATGGCGAAACCGTGTATTTCCCATCGAACTTGATT
GAAAACTTGTTTCTAAGTAACGGCATGAGCGCGGGTAACAACCTGCAAGAAGCTCAGGTTCAGTGTCTGTCCGAAATTTT
TGAGCGTGCGGTTAAGCGTCAAATCATCGAGCAAGAAATTGTACTGCCAGATGTACCGATGCAAGTGCTAGAGAAGTACC
CAAGCATTCTTGCAGGCATCAATGGTCTAGAAGAGCAGGGCTTCCCAGTTGTGGTTAAAGACGCGTCACTGGGTGGTCAG
TTCCCTGTGATGTGCGTGACCTTGATGAACCCTAAAACCGGTGGTGTATTTGCCTCATTCGGCGCGCACCCAAGCTTTGA
AGTCGCACTGGAGCGTAGCTTAACTGAGCTACTACAGGGCCGTAGCTTCGAAGGCTTAAACGATGTACCTAAGCCTACGT
TCAACAGCATGGCGGTAACTGAGCCTGAAAACTTCGTCGAGCACTTTATCGACTCGACGGGTGTGATCTCATGGCGCTTC
TTTAGCAGCAAGCATGATTATGAGTTTGTTGAGTGGGACTTCTCTGGTACTAACCAAGAGGAAGCAGATGGCTTATTCGG
CATCTTAGAAACCTTAGGCAAAGAGGTGTACACAGCTGATTTTGACCAGCTTGGCGCATCGGCTTGTCGTATGCTGGTAC
CGGGTTTCTCTGAAGTTTACCTAGTGGATGACTTGATTTGGGATAACACCAACAAGGCGCTAGATTACCGTGAAGATATC
TTAAACCTACACTCACTGTCTGATGATGAGCTGGTGGACTTGGTTAATCGTCTAGAAGAGAGCCAGCTCGATAACTACAC
CGACATTCGCACCATGATAGGTATCGTCTTCGATGAAAATACCGTTTGGGGTCAGCTAACCATTATTGAGCTTAAGATCT
TAATCTATCTAGCACTTGGCGCGGCAGAGGAAGCGATGGAGCTAGTGGGGGATTTCCTACAGTATAACGACAACACGGTT
GAGCGCGGCCTGTTTTATCAAGCAGTCAATGCAGTACTTGAAGTTGAAATGGACGAAGAGCTAGAGCTTGAGCACTTTAT
CCATAGCTTCAATCGTATGTTTGGCGAAGAAGTCATGGATAACGTTATCGGCACTGTTAGTGGTGAAGTGCGTTTCTTCG
GCCTAACCAAGACCAGCATGGCGCTTGAAGGCATCGAGCCACACCTACGCTTGATTGAAAGCTACAAGAAGTTACATAGC
GCACGCGCTAAGGCGGCAGCTAAGTAA

Upstream 100 bases:

>100_bases
TAATTCCCTTCATAAGTTTATCTGGCCTTAGGGCTCGTTTGAGCCAAGACTCATTATTGAGCCAAGGGCGACGCTCGCTA
TTAAGTGGAAATCATATTCA

Downstream 100 bases:

>100_bases
CAGGCTTATCTAGCTTCTAAGTGATAAGCTAGCCGTCAAAAGCGAACTCTTTGGCACTGCTCTAAAGGTTCGCTTTTTTG
TTTGCTACTCGCAAGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 728; Mature: 728

Protein sequence:

>728_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCKARDIPTENIRLSQNNIVDPE
DRYNQIFQIQVELPDDISDKDRQGILRSIERCTVKKVVQTGPEFKIETVENLDADANAMLMGQSDSDASTYILGKDLPLE
QTIANMTGMLADLGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGEE
IANSEFVHYPNEKWFELEDDDSLPAGMLDDYCLAIYNPEGELGGSNLIDTNSGNIDRGICTIPYTRHSDGETVYFPSNLI
ENLFLSNGMSAGNNLQEAQVQCLSEIFERAVKRQIIEQEIVLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQ
FPVMCVTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKHDYEFVEWDFSGTNQEEADGLFGILETLGKEVYTADFDQLGASACRMLVPGFSEVYLVDDLIWDNTNKALDYREDI
LNLHSLSDDELVDLVNRLEESQLDNYTDIRTMIGIVFDENTVWGQLTIIELKILIYLALGAAEEAMELVGDFLQYNDNTV
ERGLFYQAVNAVLEVEMDEELELEHFIHSFNRMFGEEVMDNVIGTVSGEVRFFGLTKTSMALEGIEPHLRLIESYKKLHS
ARAKAAAK

Sequences:

>Translated_728_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCKARDIPTENIRLSQNNIVDPE
DRYNQIFQIQVELPDDISDKDRQGILRSIERCTVKKVVQTGPEFKIETVENLDADANAMLMGQSDSDASTYILGKDLPLE
QTIANMTGMLADLGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGEE
IANSEFVHYPNEKWFELEDDDSLPAGMLDDYCLAIYNPEGELGGSNLIDTNSGNIDRGICTIPYTRHSDGETVYFPSNLI
ENLFLSNGMSAGNNLQEAQVQCLSEIFERAVKRQIIEQEIVLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQ
FPVMCVTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKHDYEFVEWDFSGTNQEEADGLFGILETLGKEVYTADFDQLGASACRMLVPGFSEVYLVDDLIWDNTNKALDYREDI
LNLHSLSDDELVDLVNRLEESQLDNYTDIRTMIGIVFDENTVWGQLTIIELKILIYLALGAAEEAMELVGDFLQYNDNTV
ERGLFYQAVNAVLEVEMDEELELEHFIHSFNRMFGEEVMDNVIGTVSGEVRFFGLTKTSMALEGIEPHLRLIESYKKLHS
ARAKAAAK
>Mature_728_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCKARDIPTENIRLSQNNIVDPE
DRYNQIFQIQVELPDDISDKDRQGILRSIERCTVKKVVQTGPEFKIETVENLDADANAMLMGQSDSDASTYILGKDLPLE
QTIANMTGMLADLGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGEE
IANSEFVHYPNEKWFELEDDDSLPAGMLDDYCLAIYNPEGELGGSNLIDTNSGNIDRGICTIPYTRHSDGETVYFPSNLI
ENLFLSNGMSAGNNLQEAQVQCLSEIFERAVKRQIIEQEIVLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQ
FPVMCVTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKHDYEFVEWDFSGTNQEEADGLFGILETLGKEVYTADFDQLGASACRMLVPGFSEVYLVDDLIWDNTNKALDYREDI
LNLHSLSDDELVDLVNRLEESQLDNYTDIRTMIGIVFDENTVWGQLTIIELKILIYLALGAAEEAMELVGDFLQYNDNTV
ERGLFYQAVNAVLEVEMDEELELEHFIHSFNRMFGEEVMDNVIGTVSGEVRFFGLTKTSMALEGIEPHLRLIESYKKLHS
ARAKAAAK

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=583, Percent_Identity=46.9982847341338, Blast_Score=550, Evalue=1e-157,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 81743; Mature: 81743

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
CEEEEEEHHCCEEEEECCCEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARDIPTENIRLSQNNIVDPEDRYNQIFQIQVELPDDISDKDRQGILRSIERCTVKKVVQT
HCCCCCCCEEECCCCCCCCHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPEFKIETVENLDADANAMLMGQSDSDASTYILGKDLPLEQTIANMTGMLADLGMKIEIS
CCCEEEEEHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGEE
CHHCCCCCHHEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHH
IANSEFVHYPNEKWFELEDDDSLPAGMLDDYCLAIYNPEGELGGSNLIDTNSGNIDRGIC
HCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCEE
TIPYTRHSDGETVYFPSNLIENLFLSNGMSAGNNLQEAQVQCLSEIFERAVKRQIIEQEI
ECCCEECCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEEEEE
FSSKHDYEFVEWDFSGTNQEEADGLFGILETLGKEVYTADFDQLGASACRMLVPGFSEVY
ECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHEECCHHHHHHHHHHHHCCCCCCEE
LVDDLIWDNTNKALDYREDILNLHSLSDDELVDLVNRLEESQLDNYTDIRTMIGIVFDEN
EEHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECC
TVWGQLTIIELKILIYLALGAAEEAMELVGDFLQYNDNTVERGLFYQAVNAVLEVEMDEE
CCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCC
LELEHFIHSFNRMFGEEVMDNVIGTVSGEVRFFGLTKTSMALEGIEPHLRLIESYKKLHS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHHH
ARAKAAAK
HHHHHCCC
>Mature Secondary Structure
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
CEEEEEEHHCCEEEEECCCEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARDIPTENIRLSQNNIVDPEDRYNQIFQIQVELPDDISDKDRQGILRSIERCTVKKVVQT
HCCCCCCCEEECCCCCCCCHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPEFKIETVENLDADANAMLMGQSDSDASTYILGKDLPLEQTIANMTGMLADLGMKIEIS
CCCEEEEEHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGEE
CHHCCCCCHHEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHH
IANSEFVHYPNEKWFELEDDDSLPAGMLDDYCLAIYNPEGELGGSNLIDTNSGNIDRGIC
HCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCEE
TIPYTRHSDGETVYFPSNLIENLFLSNGMSAGNNLQEAQVQCLSEIFERAVKRQIIEQEI
ECCCEECCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEEEEE
FSSKHDYEFVEWDFSGTNQEEADGLFGILETLGKEVYTADFDQLGASACRMLVPGFSEVY
ECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHEECCHHHHHHHHHHHHCCCCCCEE
LVDDLIWDNTNKALDYREDILNLHSLSDDELVDLVNRLEESQLDNYTDIRTMIGIVFDEN
EEHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECC
TVWGQLTIIELKILIYLALGAAEEAMELVGDFLQYNDNTVERGLFYQAVNAVLEVEMDEE
CCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCC
LELEHFIHSFNRMFGEEVMDNVIGTVSGEVRFFGLTKTSMALEGIEPHLRLIESYKKLHS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHHH
ARAKAAAK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]