| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963069
Identifier: 157963069
GI number: 157963069
Start: 3989316
End: 3990227
Strand: Reverse
Name: 157963069
Synonym: Spea_3252
Alternate gene names: NA
Gene position: 3990227-3989316 (Counterclockwise)
Preceding gene: 157963070
Following gene: 157963067
Centisome position: 77.11
GC content: 48.25
Gene sequence:
>912_bases ATGCGCGGAGTGTTGTATCTATTTATTGCCACCTTGTTGGCTGCTGTGGGCTGGGTTGCCTCTAAAATTGTGGTGCAATC TGTGCCGGGGGAGTTATTTATTGGCTCCCGCTTTCTATTGGCAAGTTTAGTCTTGCTGCCATTTTGCTATAAGAGCCTGC TGAAACTCAGTATGAAACAGTTGCTGTCGGCCTGTGGTGTTGGCGTCTTTCTCGGACTCGCACTGCAAGTTTGGATCTAT GCGGTCTCGATTAGTGACAGCTTGTCTGAGGGGGCGTTTATCATGAGTTTGGCAATGATTATTGCACCGCTGACCGCTTG GATACTGTTCCAAGCTAAACCTAATCGTGCCTTTTGGATAGCCTTGCCTGTGAGTACGACGGGCATGATGCTACTGAGCC TAACTAATGGCTGGAAGATGGAGTCGAGTCAGTTGCTGTTCTTGCTGGCATCGGCATTGCTTTCTGTACATTTCGTGATG AATAAGCGCATCAGCGGTAATCTAAAGCCACTGGTTTCTATCTGCTTACAGTTATTTGTGGTCGGCTTAGTGGGCTTGGG CTATGCCTCGATTACTCAGCCTCACAGCATAGCGTTTTCTGGAGAGCTAATTAGTTGGTTTGCCATTTCGACCCTGATTG CCACCTCTGTACGTTACCTATTGCAGACTATGGGGCAGTATAAGGTGAGCATGGAAACCGCAGCGCTATTGATGATCTTA GAGCCTATTTGGACCCTGCTCTTGAGTATGACTCTGTTGGGAGAGACGCTAGAGCCACAAAAGCTTATTGGCGGCGGGGT GATCTTCTTGTCACTGTTTCTTTATATCAAACTGTCTCGACGCTTTGCGAAGGCAGAGCAAGCAAAGGCGGTACAAGTAG AGACCGAACAAGCTGAGACGGTAAAAGCATAG
Upstream 100 bases:
>100_bases GGTTGCTATTTTTGTTTTTAGCGCAGCGCATTTTATTCAATGGCGCTGTGTAAAGATCCTATTTCAATTGGCTATAAGCC CCTATTTAAGAGTGCTATTG
Downstream 100 bases:
>100_bases AAGGTACTAGATCCTAGGAAAAGCTGAGAAAGGTCCTAGGTGCTAGGAAGAGCTAAGACGATAACAGACGTACAGCCTGC GGCCTAGGGAACGTGACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: RhaT Protein; DMT Family Permease; DMT Superfamily Drug/Metabolite Transporter; Permease DMT Superfamily; Drug/Metabolite Exporter Family Protein; Transporter Drug/Metabolite Exporter Family; Integral Membrane Protein; Integral Membrane Protein Transmembrane Transporter
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQLLSACGVGVFLGLALQVWIY AVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWIALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVM NKRISGNLKPLVSICLQLFVVGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAETVKA
Sequences:
>Translated_303_residues MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQLLSACGVGVFLGLALQVWIY AVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWIALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVM NKRISGNLKPLVSICLQLFVVGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAETVKA >Mature_303_residues MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQLLSACGVGVFLGLALQVWIY AVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWIALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVM NKRISGNLKPLVSICLQLFVVGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAETVKA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33062; Mature: 33062
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH LLSACGVGVFLGLALQVWIYAVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEE ALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVMNKRISGNLKPLVSICLQLFV EEECCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL HHHHHCCHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAET HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHH VKA CCC >Mature Secondary Structure MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCYKSLLKLSMKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH LLSACGVGVFLGLALQVWIYAVSISDSLSEGAFIMSLAMIIAPLTAWILFQAKPNRAFWI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEE ALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVMNKRISGNLKPLVSICLQLFV EEECCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMETAALLMIL HHHHHCCHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAKAVQVETEQAET HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHH VKA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA