| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962976
Identifier: 157962976
GI number: 157962976
Start: 3863366
End: 3864334
Strand: Reverse
Name: 157962976
Synonym: Spea_3159
Alternate gene names: NA
Gene position: 3864334-3863366 (Counterclockwise)
Preceding gene: 157962977
Following gene: 157962975
Centisome position: 74.68
GC content: 43.03
Gene sequence:
>969_bases ATGATGAATACATTACAGAGCTTATCAATATTAACGTTTGCAGTATCTTTGGGTTTTTCTAACTTTTCTCAAGCAAATCA GTCTCAAGCTAATCAGTCACAAGAAGGCAATGAACAGGTTTTCTTCGATGAATTTAGTTATACCGACGTCAAGAGCTTTA ATAGTAACGGTTGGAAAGCCAGAACTGAAACCGGTCATCCTGGTATTGCTGGGGCAACATGGTCTGCTGAAGGTTTGAGT TTTCATCCTGAGCTTAAGGATGCTAATCGCGGGGCGATTAGAATGAGCTCTGTTACCGCCGGAGGAGGGACGAATACACG TCACACTCAGTTTTGTCACAAACGTAAGTACCTAGAAGGAACCTATGCATCGAGAGTGTTCTTCCGTGACACACCAACTT ATGGGCCAGATGGAGATGAAGTTATTCAAACTTTCTATACCATTAGTCCGCTAGAGTTCCCATTAGATCCCAGTTACAGC GAAGTCGATTTTGAGTACCTGCCCAATGGTGGCTGGGGCAGTGACAGCTCACCAGCCATGTGGACGACCACTTGGGAAAC ATTTCAACTTGAGCCTTGGACTAAAGTTAACGAGTACACAAGAAAAGAAGGAAGTTATGCCGGCTGGAGAATATTGGTAA TGACCGTAGAAAAAGATGAGGTCAATTATTATGTTGACGGCAAGCTTATCTCTACTCATTCCGAGAACGTGGCTCCAGAG AAGCTGATGTCGATTAACTTCAATTTATGGTTCATGCCTAAAGGTGCCGATGGTTCTATTGGTCCAGTAGATTCTGATGA GTTAAGAGAGTACCAGCAGGATATAGATTGGGTTTTTCATATTGCGAATGACATTATCACTCCACAGCAGGTGTTAAATC AGGTCGCTAGTCTACAAGCGCAAGACATTAAACATATTGATGGTGTAGCAGAAAGAAGACCTGCTTTGCCTTCTCCCTGT GGATTATAA
Upstream 100 bases:
>100_bases TTGTTTGTATGAAGGGAATACGACTAATGGGTGATAACAAGTGTAAAAGTATAATGATAGGTTTGACAGCGTTGTCATTA AATCTAAAGGATATAGAAAT
Downstream 100 bases:
>100_bases CTCTCGTTTGTTTAGCTCATATAGGAAGTGTTTTGAGGGGGATTTGTGGGTAAAATGGTTAAAGTACAGACTAAATGTTT GAAAAAGCCGCAGGCAGTAA
Product: hydrolase
Products: NA
Alternate protein names: Endoglucanase; Glycosyl Hydrolase
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MMNTLQSLSILTFAVSLGFSNFSQANQSQANQSQEGNEQVFFDEFSYTDVKSFNSNGWKARTETGHPGIAGATWSAEGLS FHPELKDANRGAIRMSSVTAGGGTNTRHTQFCHKRKYLEGTYASRVFFRDTPTYGPDGDEVIQTFYTISPLEFPLDPSYS EVDFEYLPNGGWGSDSSPAMWTTTWETFQLEPWTKVNEYTRKEGSYAGWRILVMTVEKDEVNYYVDGKLISTHSENVAPE KLMSINFNLWFMPKGADGSIGPVDSDELREYQQDIDWVFHIANDIITPQQVLNQVASLQAQDIKHIDGVAERRPALPSPC GL
Sequences:
>Translated_322_residues MMNTLQSLSILTFAVSLGFSNFSQANQSQANQSQEGNEQVFFDEFSYTDVKSFNSNGWKARTETGHPGIAGATWSAEGLS FHPELKDANRGAIRMSSVTAGGGTNTRHTQFCHKRKYLEGTYASRVFFRDTPTYGPDGDEVIQTFYTISPLEFPLDPSYS EVDFEYLPNGGWGSDSSPAMWTTTWETFQLEPWTKVNEYTRKEGSYAGWRILVMTVEKDEVNYYVDGKLISTHSENVAPE KLMSINFNLWFMPKGADGSIGPVDSDELREYQQDIDWVFHIANDIITPQQVLNQVASLQAQDIKHIDGVAERRPALPSPC GL >Mature_322_residues MMNTLQSLSILTFAVSLGFSNFSQANQSQANQSQEGNEQVFFDEFSYTDVKSFNSNGWKARTETGHPGIAGATWSAEGLS FHPELKDANRGAIRMSSVTAGGGTNTRHTQFCHKRKYLEGTYASRVFFRDTPTYGPDGDEVIQTFYTISPLEFPLDPSYS EVDFEYLPNGGWGSDSSPAMWTTTWETFQLEPWTKVNEYTRKEGSYAGWRILVMTVEKDEVNYYVDGKLISTHSENVAPE KLMSINFNLWFMPKGADGSIGPVDSDELREYQQDIDWVFHIANDIITPQQVLNQVASLQAQDIKHIDGVAERRPALPSPC GL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36139; Mature: 36139
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNTLQSLSILTFAVSLGFSNFSQANQSQANQSQEGNEQVFFDEFSYTDVKSFNSNGWKA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCCCCCEE RTETGHPGIAGATWSAEGLSFHPELKDANRGAIRMSSVTAGGGTNTRHTQFCHKRKYLEG ECCCCCCCCCCCEECCCCCEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC TYASRVFFRDTPTYGPDGDEVIQTFYTISPLEFPLDPSYSEVDFEYLPNGGWGSDSSPAM HHHEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEE WTTTWETFQLEPWTKVNEYTRKEGSYAGWRILVMTVEKDEVNYYVDGKLISTHSENVAPE EEEECEEEEECCCHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCEEEECCCCCCCCH KLMSINFNLWFMPKGADGSIGPVDSDELREYQQDIDWVFHIANDIITPQQVLNQVASLQA HHEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QDIKHIDGVAERRPALPSPCGL HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMNTLQSLSILTFAVSLGFSNFSQANQSQANQSQEGNEQVFFDEFSYTDVKSFNSNGWKA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCCCCCEE RTETGHPGIAGATWSAEGLSFHPELKDANRGAIRMSSVTAGGGTNTRHTQFCHKRKYLEG ECCCCCCCCCCCEECCCCCEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC TYASRVFFRDTPTYGPDGDEVIQTFYTISPLEFPLDPSYSEVDFEYLPNGGWGSDSSPAM HHHEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEE WTTTWETFQLEPWTKVNEYTRKEGSYAGWRILVMTVEKDEVNYYVDGKLISTHSENVAPE EEEECEEEEECCCHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCEEEECCCCCCCCH KLMSINFNLWFMPKGADGSIGPVDSDELREYQQDIDWVFHIANDIITPQQVLNQVASLQA HHEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QDIKHIDGVAERRPALPSPCGL HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA