Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962975

Identifier: 157962975

GI number: 157962975

Start: 3862357

End: 3862704

Strand: Reverse

Name: 157962975

Synonym: Spea_3158

Alternate gene names: NA

Gene position: 3862704-3862357 (Counterclockwise)

Preceding gene: 157962976

Following gene: 157962974

Centisome position: 74.65

GC content: 46.26

Gene sequence:

>348_bases
ATGGAAAAGAATGCTTATCTTGATGCCATGGGCATTACCCGCTGGAAAAAGGCTATCCCACAAGCGGATATAATGACCGT
GCTGGTAAACCCTCTGCGGATCAAAGATGTCGATAGTCCAATCATTGGCATTGTGCTCAGTTTGATTGGCGCTGACGTTA
ATCATTGTCGCTTTGCTGTGCGAGCCGAAGTTGGTAGTCGAGTTATTTGGGACATGCGTGGTAAGCAAGCAGTATCTGGT
GTTGATAGAGTGGTTTCAGCGCCGATTAACGAGCTAGAAAGCAGTGTTGAAGCAAAGAGAGCGCTATGGGCTAATATGCA
AGCTTATATGCTTAGTAAGGAGGCTTAG

Upstream 100 bases:

>100_bases
GAGCTGTTTAGGCTTAATCACTCAAACCATTTTATATCCGTGCAAGCTAACTGTTATGCTAGCGCTATATTGTATTTAAT
CCCCTTTAAACTGAGTCGTC

Downstream 100 bases:

>100_bases
TGGAGCCGCAATTGCTAAGTGAAAATATATCCGCTCAAATGGCTGCTGTTGCTTCGAGCGCACATAGTCATCCTATGAGT
GAGGCTACGATTAAAAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MEKNAYLDAMGITRWKKAIPQADIMTVLVNPLRIKDVDSPIIGIVLSLIGADVNHCRFAVRAEVGSRVIWDMRGKQAVSG
VDRVVSAPINELESSVEAKRALWANMQAYMLSKEA

Sequences:

>Translated_115_residues
MEKNAYLDAMGITRWKKAIPQADIMTVLVNPLRIKDVDSPIIGIVLSLIGADVNHCRFAVRAEVGSRVIWDMRGKQAVSG
VDRVVSAPINELESSVEAKRALWANMQAYMLSKEA
>Mature_115_residues
MEKNAYLDAMGITRWKKAIPQADIMTVLVNPLRIKDVDSPIIGIVLSLIGADVNHCRFAVRAEVGSRVIWDMRGKQAVSG
VDRVVSAPINELESSVEAKRALWANMQAYMLSKEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12710; Mature: 12710

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNAYLDAMGITRWKKAIPQADIMTVLVNPLRIKDVDSPIIGIVLSLIGADVNHCRFAV
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHCCCHHHHHHHH
RAEVGSRVIWDMRGKQAVSGVDRVVSAPINELESSVEAKRALWANMQAYMLSKEA
HHHHCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKNAYLDAMGITRWKKAIPQADIMTVLVNPLRIKDVDSPIIGIVLSLIGADVNHCRFAV
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHCCCHHHHHHHH
RAEVGSRVIWDMRGKQAVSGVDRVVSAPINELESSVEAKRALWANMQAYMLSKEA
HHHHCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA