| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ybeL [H]
Identifier: 157962959
GI number: 157962959
Start: 3847216
End: 3847716
Strand: Reverse
Name: ybeL [H]
Synonym: Spea_3142
Alternate gene names: 157962959
Gene position: 3847716-3847216 (Counterclockwise)
Preceding gene: 157962974
Following gene: 157962952
Centisome position: 74.36
GC content: 42.91
Gene sequence:
>501_bases ATGAGTGAACAAAGTACTGCGCTACTTTCGCTTTATGAGGCACTTATTGAGCATATAAAATCTCAGTATAAAGATGATAA CTCATTGACTGTAAAGAGTTTGTACAAGCAGGTGCAGGTGAGTAAACAATACTTGGCATTAAAGCAGCACGCAAAGCAAG AAGAGTTAGCTTTAGTCGAACAATTTTTGAAACGTGACATAGCAAGTTTCTTACAGGAACAAAATGCCACCGATCTGAGC CATAGCCCGACTATGATTACGGTTGAGAACACCTTATGGCACTGGTTAAGTGAAATAACCGATCGCAGTCAACTTGAATG GCATGAGGTGGCACAGGACTTTAAACACCACGGTTATTATGAAAGTGGCGAGATTGTCGGCCAGGGGACTATGGTATGTA CCGCCTGTGGGCATGAATCAAAGATCGAATTCCCAGGTGTGCTTTCAGACTGTACCGAGTGCGATAATAATGAGTTTACT CGAGAAGCGTTAGCGCCTTAG
Upstream 100 bases:
>100_bases CGCCCATTGTTTGATCTAGCGCTATTTCAGCGCGAGTTATATCGGCATAGAATAAACTAGAAGTGAGTCATTAAAAAGGT TCGTTGAAGGAGTATTTACC
Downstream 100 bases:
>100_bases TGATACTAGCACTTAGTATTAGTTAGCTATAGGGGGCTTAACACAAGCCGCGAAAAATCAGCTAACAGCCACCTCTTCTT AGTTTTTGCTCACGGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVEQFLKRDIASFLQEQNATDLS HSPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYYESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFT REALAP
Sequences:
>Translated_166_residues MSEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVEQFLKRDIASFLQEQNATDLS HSPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYYESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFT REALAP >Mature_165_residues SEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVEQFLKRDIASFLQEQNATDLSH SPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYYESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFTR EALAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=106, Percent_Identity=40.5660377358491, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009912 [H]
Pfam domain/function: PF07295 DUF1451 [H]
EC number: NA
Molecular weight: Translated: 18981; Mature: 18850
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVE CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH QFLKRDIASFLQEQNATDLSHSPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYY HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC ESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFTREALAP CCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure SEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVE CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH QFLKRDIASFLQEQNATDLSHSPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYY HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC ESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFTREALAP CCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]