Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is ybeL [H]

Identifier: 157962959

GI number: 157962959

Start: 3847216

End: 3847716

Strand: Reverse

Name: ybeL [H]

Synonym: Spea_3142

Alternate gene names: 157962959

Gene position: 3847716-3847216 (Counterclockwise)

Preceding gene: 157962974

Following gene: 157962952

Centisome position: 74.36

GC content: 42.91

Gene sequence:

>501_bases
ATGAGTGAACAAAGTACTGCGCTACTTTCGCTTTATGAGGCACTTATTGAGCATATAAAATCTCAGTATAAAGATGATAA
CTCATTGACTGTAAAGAGTTTGTACAAGCAGGTGCAGGTGAGTAAACAATACTTGGCATTAAAGCAGCACGCAAAGCAAG
AAGAGTTAGCTTTAGTCGAACAATTTTTGAAACGTGACATAGCAAGTTTCTTACAGGAACAAAATGCCACCGATCTGAGC
CATAGCCCGACTATGATTACGGTTGAGAACACCTTATGGCACTGGTTAAGTGAAATAACCGATCGCAGTCAACTTGAATG
GCATGAGGTGGCACAGGACTTTAAACACCACGGTTATTATGAAAGTGGCGAGATTGTCGGCCAGGGGACTATGGTATGTA
CCGCCTGTGGGCATGAATCAAAGATCGAATTCCCAGGTGTGCTTTCAGACTGTACCGAGTGCGATAATAATGAGTTTACT
CGAGAAGCGTTAGCGCCTTAG

Upstream 100 bases:

>100_bases
CGCCCATTGTTTGATCTAGCGCTATTTCAGCGCGAGTTATATCGGCATAGAATAAACTAGAAGTGAGTCATTAAAAAGGT
TCGTTGAAGGAGTATTTACC

Downstream 100 bases:

>100_bases
TGATACTAGCACTTAGTATTAGTTAGCTATAGGGGGCTTAACACAAGCCGCGAAAAATCAGCTAACAGCCACCTCTTCTT
AGTTTTTGCTCACGGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVEQFLKRDIASFLQEQNATDLS
HSPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYYESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFT
REALAP

Sequences:

>Translated_166_residues
MSEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVEQFLKRDIASFLQEQNATDLS
HSPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYYESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFT
REALAP
>Mature_165_residues
SEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVEQFLKRDIASFLQEQNATDLSH
SPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYYESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFTR
EALAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786863, Length=106, Percent_Identity=40.5660377358491, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009912 [H]

Pfam domain/function: PF07295 DUF1451 [H]

EC number: NA

Molecular weight: Translated: 18981; Mature: 18850

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QFLKRDIASFLQEQNATDLSHSPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYY
HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
ESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFTREALAP
CCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure 
SEQSTALLSLYEALIEHIKSQYKDDNSLTVKSLYKQVQVSKQYLALKQHAKQEELALVE
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QFLKRDIASFLQEQNATDLSHSPTMITVENTLWHWLSEITDRSQLEWHEVAQDFKHHGYY
HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
ESGEIVGQGTMVCTACGHESKIEFPGVLSDCTECDNNEFTREALAP
CCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]