Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962948

Identifier: 157962948

GI number: 157962948

Start: 3834174

End: 3834599

Strand: Reverse

Name: 157962948

Synonym: Spea_3131

Alternate gene names: NA

Gene position: 3834599-3834174 (Counterclockwise)

Preceding gene: 157962949

Following gene: 157962944

Centisome position: 74.1

GC content: 42.25

Gene sequence:

>426_bases
ATGAGAAAAATTATAATTAGCTTACTTGTTAGCTGCGTTGGCGTCATGCCAGTTGTGGCGAGTGAGTTACAGCTTTACCA
AGATCCGATCCCCTATGGCACCTATATTAAGGATTTAGATAGCTTGCTGGCAGATGCGGTTAAACGTAATCATTGGGTAT
TTAGCAAAGATGAGTCAGGTATTAGATACGCAAATTTAGACTATAAGACGTACAAGATAAACACGGAGCTGATGGTAAAG
GATAATAGCGTTGCGGTTAAACTTATCAGTGCTGCGCGTCCTGATTGCGGTAAAAAGAGCTGTAAAGTCGATATGGATAG
AGTTGATGGTTGGCTTGTGAAGCTGCGCCGCAGTATCGCTTATGACGTCACTAAAGCAGTAAGAGACGATGCGCTAAAGC
GTAGGTTTGTCGAAGATATTGAATAG

Upstream 100 bases:

>100_bases
AGGCTATTACAACTATATTAAAAACCTTAGAAATAGCATCAGCAAACAGCTAGCACGACTTTAAGCTCGCCTACAGAGCG
TAGGTTAAAAGGATAAAGAG

Downstream 100 bases:

>100_bases
AGTTGTTTAGGCATAAAAAAACGCACTCAAGGAGTGCGTTTTTTCTCTCTTTTACGAGCCTAACTTTTAGCGTCTGCTAT
GAATTAGTGCTTGAACATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MRKIIISLLVSCVGVMPVVASELQLYQDPIPYGTYIKDLDSLLADAVKRNHWVFSKDESGIRYANLDYKTYKINTELMVK
DNSVAVKLISAARPDCGKKSCKVDMDRVDGWLVKLRRSIAYDVTKAVRDDALKRRFVEDIE

Sequences:

>Translated_141_residues
MRKIIISLLVSCVGVMPVVASELQLYQDPIPYGTYIKDLDSLLADAVKRNHWVFSKDESGIRYANLDYKTYKINTELMVK
DNSVAVKLISAARPDCGKKSCKVDMDRVDGWLVKLRRSIAYDVTKAVRDDALKRRFVEDIE
>Mature_141_residues
MRKIIISLLVSCVGVMPVVASELQLYQDPIPYGTYIKDLDSLLADAVKRNHWVFSKDESGIRYANLDYKTYKINTELMVK
DNSVAVKLISAARPDCGKKSCKVDMDRVDGWLVKLRRSIAYDVTKAVRDDALKRRFVEDIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16088; Mature: 16088

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIIISLLVSCVGVMPVVASELQLYQDPIPYGTYIKDLDSLLADAVKRNHWVFSKDESG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCC
IRYANLDYKTYKINTELMVKDNSVAVKLISAARPDCGKKSCKVDMDRVDGWLVKLRRSIA
CEEECCCEEEEEECEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
YDVTKAVRDDALKRRFVEDIE
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKIIISLLVSCVGVMPVVASELQLYQDPIPYGTYIKDLDSLLADAVKRNHWVFSKDESG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCC
IRYANLDYKTYKINTELMVKDNSVAVKLISAARPDCGKKSCKVDMDRVDGWLVKLRRSIA
CEEECCCEEEEEECEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
YDVTKAVRDDALKRRFVEDIE
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA