| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157962790
Identifier: 157962790
GI number: 157962790
Start: 3639647
End: 3641452
Strand: Reverse
Name: 157962790
Synonym: Spea_2972
Alternate gene names: NA
Gene position: 3641452-3639647 (Counterclockwise)
Preceding gene: 157962796
Following gene: 157962788
Centisome position: 70.37
GC content: 46.12
Gene sequence:
>1806_bases GTGAAACCTGTAGTTCCCTTTATCTTAACTTTTGGGGCGTTAGCCAGTACTAATGCCATTGCCAATGTAAACTACCAGAT TGACTTAACTAGCCCAGAACATCATTTGGCAAAGGTAGAAGTCGTCTTTCCAGAAACCCAGTCAAATTCATTAGTGGTTA ATTTGCCTGTATGGCGCACGGGTAAGTATCAAGTCTTGCCATTGGCGGATGCTGTTAGAACCTTTACGGCTACCGATGAT AGCGGTTCAGTATTACCTTGGACAAGAACCGCGAGTGGTGAGTGGACAGTTGCCTTAACTGAACCAACGAGCGTAACCGT CAGTTATCAACTCTATGCCAACAAATTAGGCCAAAGGGTCAATCATATCGATGCATCCCATGCTTTTTTAGATGCGAGTG GCACTTTTGTTTATAGCCCAGAGTTTAGAAATGAGCCTTTAACTGTTTCCTTAGATGTACCTAGTGACTGGAATAGTTAT TCCGGTATGGACAGTGGCAAGAAGGCACATTCTTTTATAGCCGATAATTACGATATCTTAGTCGACTCTCCAATCGAAAC CGGGCTCAGCGAGCATCGAACTTTTAGAGCCGACGGCAGAGCGTATGAATTAGTGGTTTGGGGGGAGGGCAACTACGACA TCGACCAAATAGTTACCGACTTGAGCAAACTCAGTGGTCAGGCCGAGGTCATTTGGGATGATTATCCGTTTGAGCGTTAT GTTTACATGGTCCATGCCACGAGCGGTGCCCGCGGCGCAACAGAGCATCTGAACTCAACCATTATTCAGCGCCCACGTTT TAGTTATCGAGATCGTAAAGATTATTTAGGATTTATCAAAACCGCTTCTCATGAGTTTATTCATACTTGGAACGTCAAGG CTTATCGCCCAGATGGATTAGTCCCTTACAACTATCAAGATGAAGAGATCACCGAGCTACTTTGGATTGCTGAAGGCTCA ACCAGTTACTTCCAAAGCCAGTTATTGCTACGTGCTGGAGTGATGACCCCGAAGGAGTTTTTAGAAGACTTGGCAAAACG TGTAGCGCAAAGCGAGAAAACACCGGGACGTGAAGTGCAATCAATTGCAGAGGCCAGTGCTAATCAGTGGGCAAGTAGCG GTGGTGATTACGCGGTTAACCACAGCACTAACATCTACTCAGAGGGGTACTTAACCTCTTTGGCTCTCGATTTCTCTTTG CTTGAACAAACCAAACTTAAGCGCTCATATCGCGACGTACACCGTAAGCTCTACAATGAATACAAGCTCCCCGTGGGCTA TACCATTGCTGATGTGAAAGGGATCTTAAACCAAGTATCGGGGACAAGTTATGAAAACTGGTGGCAGGAGTATGTTAACT CGCCAGTCAGTTTAGACTTTGATGCCTTGCTCGGTCAGGCCGGTCTAAAAACCAGTTACGGTAAAGACACTAAAGTCGAG CCTTTTACCGGAGTGACCTTGAAGTCTGGTTCATTGGTGTTGTCTCAGGTGCTGCGTAATGGTCCTGCTTGGAATGCGGG CATCGTACTTGGCGACGAGGTAGTGGCGATAAACGGCCTTAAAGTGACAGCGGCGGGTTTCGAGTCACGCATTAAAGACT TTAACGCTACAGACACGATTAAAGTAACCTTATTTAGCAATGACAGGTTGAAAGAGGTGGAGCTTAAGCTCGGCGAGAAG CAAAGTGGCAAGTTGGCAATCACCAGTGTCGACAAGCCAAGTCGTTCACAAAAGGCTTTCTTTGAGGCTTGGCTTGGTGT CGATTGGCCGTTTGATAAACAAGGTCAGCTAAAAGCGGTCAAATAA
Upstream 100 bases:
>100_bases TTAAATTAAGCGCCTGATTTTTGTTATTCTTTGGCTTGGTTGAGTCTTGTGTTATATTTTTTTTGCTCAATTAGAATAAT AATAACAGAAGGATGTGAGA
Downstream 100 bases:
>100_bases ATTGGCTGGGAGAGCAAAAAGGCGCCATTAGGCGCCTTTTTATTAACACATGCAGTTAATTAGATGCTGTCTTCTAGGCC GCCAAGAGCCTCTACCGTTG
Product: peptidase M61 domain-containing protein
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; Glycyl Aminopeptidase; Pdz/Dhr/Glgf; M61 Family Glycyl Aminopeptidase; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Aminopeptidase; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MKPVVPFILTFGALASTNAIANVNYQIDLTSPEHHLAKVEVVFPETQSNSLVVNLPVWRTGKYQVLPLADAVRTFTATDD SGSVLPWTRTASGEWTVALTEPTSVTVSYQLYANKLGQRVNHIDASHAFLDASGTFVYSPEFRNEPLTVSLDVPSDWNSY SGMDSGKKAHSFIADNYDILVDSPIETGLSEHRTFRADGRAYELVVWGEGNYDIDQIVTDLSKLSGQAEVIWDDYPFERY VYMVHATSGARGATEHLNSTIIQRPRFSYRDRKDYLGFIKTASHEFIHTWNVKAYRPDGLVPYNYQDEEITELLWIAEGS TSYFQSQLLLRAGVMTPKEFLEDLAKRVAQSEKTPGREVQSIAEASANQWASSGGDYAVNHSTNIYSEGYLTSLALDFSL LEQTKLKRSYRDVHRKLYNEYKLPVGYTIADVKGILNQVSGTSYENWWQEYVNSPVSLDFDALLGQAGLKTSYGKDTKVE PFTGVTLKSGSLVLSQVLRNGPAWNAGIVLGDEVVAINGLKVTAAGFESRIKDFNATDTIKVTLFSNDRLKEVELKLGEK QSGKLAITSVDKPSRSQKAFFEAWLGVDWPFDKQGQLKAVK
Sequences:
>Translated_601_residues MKPVVPFILTFGALASTNAIANVNYQIDLTSPEHHLAKVEVVFPETQSNSLVVNLPVWRTGKYQVLPLADAVRTFTATDD SGSVLPWTRTASGEWTVALTEPTSVTVSYQLYANKLGQRVNHIDASHAFLDASGTFVYSPEFRNEPLTVSLDVPSDWNSY SGMDSGKKAHSFIADNYDILVDSPIETGLSEHRTFRADGRAYELVVWGEGNYDIDQIVTDLSKLSGQAEVIWDDYPFERY VYMVHATSGARGATEHLNSTIIQRPRFSYRDRKDYLGFIKTASHEFIHTWNVKAYRPDGLVPYNYQDEEITELLWIAEGS TSYFQSQLLLRAGVMTPKEFLEDLAKRVAQSEKTPGREVQSIAEASANQWASSGGDYAVNHSTNIYSEGYLTSLALDFSL LEQTKLKRSYRDVHRKLYNEYKLPVGYTIADVKGILNQVSGTSYENWWQEYVNSPVSLDFDALLGQAGLKTSYGKDTKVE PFTGVTLKSGSLVLSQVLRNGPAWNAGIVLGDEVVAINGLKVTAAGFESRIKDFNATDTIKVTLFSNDRLKEVELKLGEK QSGKLAITSVDKPSRSQKAFFEAWLGVDWPFDKQGQLKAVK >Mature_601_residues MKPVVPFILTFGALASTNAIANVNYQIDLTSPEHHLAKVEVVFPETQSNSLVVNLPVWRTGKYQVLPLADAVRTFTATDD SGSVLPWTRTASGEWTVALTEPTSVTVSYQLYANKLGQRVNHIDASHAFLDASGTFVYSPEFRNEPLTVSLDVPSDWNSY SGMDSGKKAHSFIADNYDILVDSPIETGLSEHRTFRADGRAYELVVWGEGNYDIDQIVTDLSKLSGQAEVIWDDYPFERY VYMVHATSGARGATEHLNSTIIQRPRFSYRDRKDYLGFIKTASHEFIHTWNVKAYRPDGLVPYNYQDEEITELLWIAEGS TSYFQSQLLLRAGVMTPKEFLEDLAKRVAQSEKTPGREVQSIAEASANQWASSGGDYAVNHSTNIYSEGYLTSLALDFSL LEQTKLKRSYRDVHRKLYNEYKLPVGYTIADVKGILNQVSGTSYENWWQEYVNSPVSLDFDALLGQAGLKTSYGKDTKVE PFTGVTLKSGSLVLSQVLRNGPAWNAGIVLGDEVVAINGLKVTAAGFESRIKDFNATDTIKVTLFSNDRLKEVELKLGEK QSGKLAITSVDKPSRSQKAFFEAWLGVDWPFDKQGQLKAVK
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67017; Mature: 67017
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVVPFILTFGALASTNAIANVNYQIDLTSPEHHLAKVEVVFPETQSNSLVVNLPVWRT CCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECEECC GKYQVLPLADAVRTFTATDDSGSVLPWTRTASGEWTVALTEPTSVTVSYQLYANKLGQRV CCEEEEEHHHHHHEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEHHHHHHHHH NHIDASHAFLDASGTFVYSPEFRNEPLTVSLDVPSDWNSYSGMDSGKKAHSFIADNYDIL HHCCCCCEEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEE VDSPIETGLSEHRTFRADGRAYELVVWGEGNYDIDQIVTDLSKLSGQAEVIWDDYPFERY EECCHHHCHHHCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEE VYMVHATSGARGATEHLNSTIIQRPRFSYRDRKDYLGFIKTASHEFIHTWNVKAYRPDGL EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCC VPYNYQDEEITELLWIAEGSTSYFQSQLLLRAGVMTPKEFLEDLAKRVAQSEKTPGREVQ CCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHH SIAEASANQWASSGGDYAVNHSTNIYSEGYLTSLALDFSLLEQTKLKRSYRDVHRKLYNE HHHHHHHHHHHCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKLPVGYTIADVKGILNQVSGTSYENWWQEYVNSPVSLDFDALLGQAGLKTSYGKDTKVE CCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCC PFTGVTLKSGSLVLSQVLRNGPAWNAGIVLGDEVVAINGLKVTAAGFESRIKDFNATDTI CCCCEEEECCHHHHHHHHHCCCCCCCCEEECCCEEEEECEEEEECCHHHHHCCCCCCCEE KVTLFSNDRLKEVELKLGEKQSGKLAITSVDKPSRSQKAFFEAWLGVDWPFDKQGQLKAV EEEEECCCCEEEEHEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEC K C >Mature Secondary Structure MKPVVPFILTFGALASTNAIANVNYQIDLTSPEHHLAKVEVVFPETQSNSLVVNLPVWRT CCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECEECC GKYQVLPLADAVRTFTATDDSGSVLPWTRTASGEWTVALTEPTSVTVSYQLYANKLGQRV CCEEEEEHHHHHHEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEHHHHHHHHH NHIDASHAFLDASGTFVYSPEFRNEPLTVSLDVPSDWNSYSGMDSGKKAHSFIADNYDIL HHCCCCCEEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEE VDSPIETGLSEHRTFRADGRAYELVVWGEGNYDIDQIVTDLSKLSGQAEVIWDDYPFERY EECCHHHCHHHCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEE VYMVHATSGARGATEHLNSTIIQRPRFSYRDRKDYLGFIKTASHEFIHTWNVKAYRPDGL EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCC VPYNYQDEEITELLWIAEGSTSYFQSQLLLRAGVMTPKEFLEDLAKRVAQSEKTPGREVQ CCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHH SIAEASANQWASSGGDYAVNHSTNIYSEGYLTSLALDFSLLEQTKLKRSYRDVHRKLYNE HHHHHHHHHHHCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKLPVGYTIADVKGILNQVSGTSYENWWQEYVNSPVSLDFDALLGQAGLKTSYGKDTKVE CCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCC PFTGVTLKSGSLVLSQVLRNGPAWNAGIVLGDEVVAINGLKVTAAGFESRIKDFNATDTI CCCCEEEECCHHHHHHHHHCCCCCCCCEEECCCEEEEECEEEEECCHHHHHCCCCCCCEE KVTLFSNDRLKEVELKLGEKQSGKLAITSVDKPSRSQKAFFEAWLGVDWPFDKQGQLKAV EEEEECCCCEEEEHEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA