Click here to switch to the map view.

The map label for this gene is nmpC [C]

Identifier: 157962788

GI number: 157962788

Start: 3637436

End: 3638386

Strand: Reverse

Name: nmpC [C]

Synonym: Spea_2970

Alternate gene names: 157962788

Gene position: 3638386-3637436 (Counterclockwise)

Preceding gene: 157962790

Following gene: 157962787

Centisome position: 70.31

GC content: 42.48

Gene sequence:

>951_bases
ATGATGAACGTTTTCTGTAAAACTCTACTGGCTTCTGCTGTTGCGACTGCAACTATGTCTTCTGCTTACGCGGCTGACCC
ACTAACAGTTTACGGCAAGCTTAATGTGACAGCTCAGTCAAATGACGTAAACGATGAATCAACAACTACGATTCAATCTA
ATGCTTCTCGTTTTGGTGTTAAAGGTGCTTTCGAGTTAAGTAACTCGCTAGAAGCGTTTTACACAGTAGAATATGAAGTT
GATACCGGTGATAGCAGCAAAGACAATTTCGAAGCACGTAATCAATTTGTTGGTCTTAGAGGTAACTTTGGTGCTTTCTC
TGTAGGTCGTAACGACACTATGCTCAAAGCTTCACAAGGTAAGGTTGATCAGTTCAACGACCTATCGGGTGATTTGAAGA
ACTTGTTCAAGGGGGAAAACCGTATTGAACAAACCGCAACTTATATCACGCCATCTTTTGGTGGTTTCAAAGTTGGTGTA
ACTTACGCTGCTGAAGGCGCTAGCTCACAATATACACAAGATGGTTTCAGTGTTGCCGCCATGTACGGTGATGCCAAACT
TAAGAAGTCACCAATCTACGCATCGGTTGCTTATGATTCGGACGTAAAAGGCTATGAAGTTGCACGTGCAACCGTACAAG
GCAAGATTGCTGGTCTTAAGTTGGGGGCTATGTATCAGCAGCAGGAAGAGACTTATAGCAAAGATGGTACAGCCATTGTT
GGTAGCGAAAGCAAAACCGGTTACCTACTTAGTGCTGCTTACCAAATTGAAGCCATCGTACTGAAAGCTCAGTATCAAGA
CATGGAAGACAAGGGTGACTCTTGGTCTTTAGGTGGTGATTATAAGCTAGGTAAGCCAACTAAGTTGTTCGCTTTCTACA
CAAATCGTTCATTTGAGAACGTTGAAAATGACGATAGCTACTTCGGTATAGGTCTAGAACATAAGTTCTAA

Upstream 100 bases:

>100_bases
CCGTTATTCAGTTCTTACTGAAATAAAAGTGCAACAAATCATCTTCATTATGACGCTCGTCCAAACCAATAACCAAGACG
AATAACGTCAAAAGGATTAA

Downstream 100 bases:

>100_bases
ACCGGCTTCGGCATATTGATAACAAGGGGCTTAGGCCTCTTTTTTGATCTTGAATTAAAATAGGTGTTTGATGCCTAACT
GTAGGTATGATTTAGTGCTT

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Outer Membrane Porin Protein; Gram-Negative Porin Superfamily; Porin Protein; Porin Signal Peptide Protein

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MMNVFCKTLLASAVATATMSSAYAADPLTVYGKLNVTAQSNDVNDESTTTIQSNASRFGVKGAFELSNSLEAFYTVEYEV
DTGDSSKDNFEARNQFVGLRGNFGAFSVGRNDTMLKASQGKVDQFNDLSGDLKNLFKGENRIEQTATYITPSFGGFKVGV
TYAAEGASSQYTQDGFSVAAMYGDAKLKKSPIYASVAYDSDVKGYEVARATVQGKIAGLKLGAMYQQQEETYSKDGTAIV
GSESKTGYLLSAAYQIEAIVLKAQYQDMEDKGDSWSLGGDYKLGKPTKLFAFYTNRSFENVENDDSYFGIGLEHKF

Sequences:

>Translated_316_residues
MMNVFCKTLLASAVATATMSSAYAADPLTVYGKLNVTAQSNDVNDESTTTIQSNASRFGVKGAFELSNSLEAFYTVEYEV
DTGDSSKDNFEARNQFVGLRGNFGAFSVGRNDTMLKASQGKVDQFNDLSGDLKNLFKGENRIEQTATYITPSFGGFKVGV
TYAAEGASSQYTQDGFSVAAMYGDAKLKKSPIYASVAYDSDVKGYEVARATVQGKIAGLKLGAMYQQQEETYSKDGTAIV
GSESKTGYLLSAAYQIEAIVLKAQYQDMEDKGDSWSLGGDYKLGKPTKLFAFYTNRSFENVENDDSYFGIGLEHKF
>Mature_316_residues
MMNVFCKTLLASAVATATMSSAYAADPLTVYGKLNVTAQSNDVNDESTTTIQSNASRFGVKGAFELSNSLEAFYTVEYEV
DTGDSSKDNFEARNQFVGLRGNFGAFSVGRNDTMLKASQGKVDQFNDLSGDLKNLFKGENRIEQTATYITPSFGGFKVGV
TYAAEGASSQYTQDGFSVAAMYGDAKLKKSPIYASVAYDSDVKGYEVARATVQGKIAGLKLGAMYQQQEETYSKDGTAIV
GSESKTGYLLSAAYQIEAIVLKAQYQDMEDKGDSWSLGGDYKLGKPTKLFAFYTNRSFENVENDDSYFGIGLEHKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34314; Mature: 34314

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNVFCKTLLASAVATATMSSAYAADPLTVYGKLNVTAQSNDVNDESTTTIQSNASRFGV
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCEEEECCCHHCCC
KGAFELSNSLEAFYTVEYEVDTGDSSKDNFEARNQFVGLRGNFGAFSVGRNDTMLKASQG
CEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHCEEEECCCCCEEEECCCCCEEEECCC
KVDQFNDLSGDLKNLFKGENRIEQTATYITPSFGGFKVGVTYAAEGASSQYTQDGFSVAA
CCCCCCCCCHHHHHHHCCCHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEEE
MYGDAKLKKSPIYASVAYDSDVKGYEVARATVQGKIAGLKLGAMYQQQEETYSKDGTAIV
EECCCEEECCCCEEEEEECCCCCCHHEEEEEEECEEEEEEEHHHHHHHHHHHCCCCCEEE
GSESKTGYLLSAAYQIEAIVLKAQYQDMEDKGDSWSLGGDYKLGKPTKLFAFYTNRSFEN
ECCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCC
VENDDSYFGIGLEHKF
CCCCCCEEEEEEECCC
>Mature Secondary Structure
MMNVFCKTLLASAVATATMSSAYAADPLTVYGKLNVTAQSNDVNDESTTTIQSNASRFGV
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCEEEECCCHHCCC
KGAFELSNSLEAFYTVEYEVDTGDSSKDNFEARNQFVGLRGNFGAFSVGRNDTMLKASQG
CEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHCEEEECCCCCEEEECCCCCEEEECCC
KVDQFNDLSGDLKNLFKGENRIEQTATYITPSFGGFKVGVTYAAEGASSQYTQDGFSVAA
CCCCCCCCCHHHHHHHCCCHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEEE
MYGDAKLKKSPIYASVAYDSDVKGYEVARATVQGKIAGLKLGAMYQQQEETYSKDGTAIV
EECCCEEECCCCEEEEEECCCCCCHHEEEEEEECEEEEEEEHHHHHHHHHHHCCCCCEEE
GSESKTGYLLSAAYQIEAIVLKAQYQDMEDKGDSWSLGGDYKLGKPTKLFAFYTNRSFEN
ECCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCC
VENDDSYFGIGLEHKF
CCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA