| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is pstS [H]
Identifier: 157962785
GI number: 157962785
Start: 3633722
End: 3634693
Strand: Reverse
Name: pstS [H]
Synonym: Spea_2967
Alternate gene names: 157962785
Gene position: 3634693-3633722 (Counterclockwise)
Preceding gene: 157962786
Following gene: 157962783
Centisome position: 70.24
GC content: 45.16
Gene sequence:
>972_bases ATGAAACTGAAACAACTTGTTGGCGCGGTAAGCTTTACTGCAGCGACTGTATTTTCTGCAGCATCAATGGCTGCAATCGA CCAGTCTTTACCGACTTACGAAAAGACAAGCGGCGTGTCTGGTAACTTATCGTCAGTAGGCTCTGATACTCTGGCAAACA TGATGACACTATGGGCTGAAGACTTTAAACAACTTTATCCAAACGTAAACATCCAGATCCAAGCGGCAGGTTCTTCTACT GCGCCACCAGCATTAACTGAAGGCACTTCTCAGTTTGGCCCTATGAGCCGTAAGATGAAGCCAAACGAAGTTGAAGCGTT TGAAAAGCATTACGGTTACCAGCCAACGGCTATCCGTGTTGCAATTGATGCTCTAGCAGTATTTGTACATAAAGATAACC CAATCGAAGGTATGAGCATCGAACAGATCGACGGCATCTTCTCTTCTACAGATAAGTGTGGCGGTGGTGATGTGACACGT TGGGGGCAAGTTGGCCTTGATGGTGGCTGGGCAGCGAGAGATATACAGCTATACGGTCGTAACTCAGTATCGGGCACTTA CGGTTACTTTAAAAAGAAAGCACTATGTAAAGGTGATTTCAAAGCGAACGTAAACGAGCAACCAGGTTCTGCTTCTGTAG TACAGTCTGTATCTCAATCACTTAACGCGATTGGTTACTCGGGAATTGGTTATAAGACTGCCGGTGTTAAAGCGGTTGCG ATTTCTAAGAAAGGCACTAACTATATTGCTGCAACAGCAGACAATGCAGCAACGGGTAAATACCCACTGTCTCGCTACCT ATACGTATACGTCAACAAGCATCCAAACAAAGATTTATCACCAATGGATCGCGAATTCATCCGTTACGTGCTATCTCAGC AAGGTCAGCAAATTGTTGAAAAAGACGGTTACGTTGCACTACCACGCAGCGTTATCGCAAAAGACTTAGCTAAAGCGGGG ATCCGTCTTTAA
Upstream 100 bases:
>100_bases TGTCATCGAAGTGTCACTTAGTAGTAATAGACTTGTCATCAATGGAGTCAATACTGACAGCGTTTTAAGAAACCAAGATA GTTAAACACTGGAGCAAAGA
Downstream 100 bases:
>100_bases TGATGGTCGCTATTCATCTTAATAGATGAATGAAAAGCAAAAAAGGCCTCAATTGAGGCCTTTTTAATGGGTTATTTCTA GTGAAAGCTACTTTTTCGCT
Product: phosphate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKLKQLVGAVSFTAATVFSAASMAAIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAEDFKQLYPNVNIQIQAAGSST APPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTAIRVAIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTR WGQVGLDGGWAARDIQLYGRNSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA ISKKGTNYIAATADNAATGKYPLSRYLYVYVNKHPNKDLSPMDREFIRYVLSQQGQQIVEKDGYVALPRSVIAKDLAKAG IRL
Sequences:
>Translated_323_residues MKLKQLVGAVSFTAATVFSAASMAAIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAEDFKQLYPNVNIQIQAAGSST APPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTAIRVAIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTR WGQVGLDGGWAARDIQLYGRNSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA ISKKGTNYIAATADNAATGKYPLSRYLYVYVNKHPNKDLSPMDREFIRYVLSQQGQQIVEKDGYVALPRSVIAKDLAKAG IRL >Mature_323_residues MKLKQLVGAVSFTAATVFSAASMAAIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAEDFKQLYPNVNIQIQAAGSST APPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTAIRVAIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTR WGQVGLDGGWAARDIQLYGRNSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA ISKKGTNYIAATADNAATGKYPLSRYLYVYVNKHPNKDLSPMDREFIRYVLSQQGQQIVEKDGYVALPRSVIAKDLAKAG IRL
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34615; Mature: 34615
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKQLVGAVSFTAATVFSAASMAAIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHCCHHHHHHHHHHHHH DFKQLYPNVNIQIQAAGSSTAPPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTAIRV HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHH AIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTRWGQVGLDGGWAARDIQLYGR HHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC NSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEE ISKKGTNYIAATADNAATGKYPLSRYLYVYVNKHPNKDLSPMDREFIRYVLSQQGQQIVE EECCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH KDGYVALPRSVIAKDLAKAGIRL CCCCEECCHHHHHHHHHHHCCCC >Mature Secondary Structure MKLKQLVGAVSFTAATVFSAASMAAIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHCCHHHHHHHHHHHHH DFKQLYPNVNIQIQAAGSSTAPPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTAIRV HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHH AIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTRWGQVGLDGGWAARDIQLYGR HHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC NSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQSVSQSLNAIGYSGIGYKTAGVKAVA CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEE ISKKGTNYIAATADNAATGKYPLSRYLYVYVNKHPNKDLSPMDREFIRYVLSQQGQQIVE EECCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH KDGYVALPRSVIAKDLAKAGIRL CCCCEECCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA