| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ybaM [C]
Identifier: 157962758
GI number: 157962758
Start: 3601682
End: 3601843
Strand: Reverse
Name: ybaM [C]
Synonym: Spea_2940
Alternate gene names: 157962758
Gene position: 3601843-3601682 (Counterclockwise)
Preceding gene: 157962760
Following gene: 157962757
Centisome position: 69.61
GC content: 45.06
Gene sequence:
>162_bases ATGAGTGACCGCACGCCAGCAAGTGAGTTAGATACGGCCCCTGAAGAGGTGAAACTTGCAGTGGATCTTATCTTTTTGTT AGAGAGTCATCAGATTGAGCCTAGTGTTGCCTTAGCTGCGCTTGAAATCGTTAAAATGGATCTAGAGGCAAAGCTGACTT AA
Upstream 100 bases:
>100_bases TTGAGTTTGCTCTAGCCCTAGCCGTTTCTTAATTGAGATGCCTAAAGGCTCTGAGTATACTTAGCCACCCTTTTATCCTT AAAATTAGAGTTAACTAAAT
Downstream 100 bases:
>100_bases TAACACTAGGCTTATTTTTGTATTTGATTAACCTATAAATCTACAGACTGGAAATAGCCAGTTGTTAGAACTGATTTTGA CTCGTTTATCCTCGATGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MSDRTPASELDTAPEEVKLAVDLIFLLESHQIEPSVALAALEIVKMDLEAKLT
Sequences:
>Translated_53_residues MSDRTPASELDTAPEEVKLAVDLIFLLESHQIEPSVALAALEIVKMDLEAKLT >Mature_52_residues SDRTPASELDTAPEEVKLAVDLIFLLESHQIEPSVALAALEIVKMDLEAKLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5793; Mature: 5662
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRTPASELDTAPEEVKLAVDLIFLLESHQIEPSVALAALEIVKMDLEAKLT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDRTPASELDTAPEEVKLAVDLIFLLESHQIEPSVALAALEIVKMDLEAKLT CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA