Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962757

Identifier: 157962757

GI number: 157962757

Start: 3600847

End: 3601587

Strand: Reverse

Name: 157962757

Synonym: Spea_2939

Alternate gene names: NA

Gene position: 3601587-3600847 (Counterclockwise)

Preceding gene: 157962758

Following gene: 157962756

Centisome position: 69.6

GC content: 45.48

Gene sequence:

>741_bases
ATGGACTCATGCATGACTATTTCGTTACTCGACCTTTTTGCGCCATTTTGTTTTATTACTTGCTGGGTCGGCTATGCCTA
TTTTGCTAAGCGTAAAGCCAAAGACACTAACTGCATCGCTCGCTGTTTACATAAGCACCGCATCAACTGGATGTATGAAT
TATTAGGCCGTGAGGTACGAGTCGGTGATGCCGCCTTGCTTGCTAATCTTGAGCGCAATATTGCCTTTTTCGCATCGACT
ACCATGTTTGTGCTTGCGGGTGTGTTAACCCTGTTTGCTCAGGCCGAACGTCTCGAAACTGTGATAGCAACCATTCCTTA
TGCTGCCAACCCGAATCACGCGTTAGTTCAAGTTAAGCTAGGCATGCTGACATTTATTTTTGTGATGGCATTTTTCCAGT
TCACTTGGTCGATGCGCCAATATGGCTTCTTAAATGTGATGGTGGGAGCTGCACCTGTCGATAAAACTGGCTCTAATGAC
AACCTACTTCGCTATGCTGAGCAGATGGCGGTGGTGCAAGATCAGGCGGCTCACTCTTATAATTACGGTTTGCGTTGTTA
CTACTTTGCCATGGCGGCACTGTGTTGGTTTTACCATCCATTTGTCTTGATTATTGCCAGTGTTTTTGTGGTGTACACAC
TCTATCGACGCGAGTTTAAATCTAAGGCCGTGGTGGCGATTACTAGAGGCCAGGAGCTGCTAAAGATTGAAAGGGCCAAT
AAGTTTAAGTTGGATGATTAA

Upstream 100 bases:

>100_bases
ACTTAATAACACTAGGCTTATTTTTGTATTTGATTAACCTATAAATCTACAGACTGGAAATAGCCAGTTGTTAGAACTGA
TTTTGACTCGTTTATCCTCG

Downstream 100 bases:

>100_bases
TCTCTAACTTTTGAATTTTCCGCGACGATAGCCTTTGAATCGTATAATATTGCGCGCTGTTTTTCATCGGCATTTAGGAT
TAAGATTTTGCACACCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDSCMTISLLDLFAPFCFITCWVGYAYFAKRKAKDTNCIARCLHKHRINWMYELLGREVRVGDAALLANLERNIAFFAST
TMFVLAGVLTLFAQAERLETVIATIPYAANPNHALVQVKLGMLTFIFVMAFFQFTWSMRQYGFLNVMVGAAPVDKTGSND
NLLRYAEQMAVVQDQAAHSYNYGLRCYYFAMAALCWFYHPFVLIIASVFVVYTLYRREFKSKAVVAITRGQELLKIERAN
KFKLDD

Sequences:

>Translated_246_residues
MDSCMTISLLDLFAPFCFITCWVGYAYFAKRKAKDTNCIARCLHKHRINWMYELLGREVRVGDAALLANLERNIAFFAST
TMFVLAGVLTLFAQAERLETVIATIPYAANPNHALVQVKLGMLTFIFVMAFFQFTWSMRQYGFLNVMVGAAPVDKTGSND
NLLRYAEQMAVVQDQAAHSYNYGLRCYYFAMAALCWFYHPFVLIIASVFVVYTLYRREFKSKAVVAITRGQELLKIERAN
KFKLDD
>Mature_246_residues
MDSCMTISLLDLFAPFCFITCWVGYAYFAKRKAKDTNCIARCLHKHRINWMYELLGREVRVGDAALLANLERNIAFFAST
TMFVLAGVLTLFAQAERLETVIATIPYAANPNHALVQVKLGMLTFIFVMAFFQFTWSMRQYGFLNVMVGAAPVDKTGSND
NLLRYAEQMAVVQDQAAHSYNYGLRCYYFAMAALCWFYHPFVLIIASVFVVYTLYRREFKSKAVVAITRGQELLKIERAN
KFKLDD

Specific function: Unknown

COG id: COG3821

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28175; Mature: 28175

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA