| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962756
Identifier: 157962756
GI number: 157962756
Start: 3599380
End: 3600759
Strand: Reverse
Name: 157962756
Synonym: Spea_2938
Alternate gene names: NA
Gene position: 3600759-3599380 (Counterclockwise)
Preceding gene: 157962757
Following gene: 157962750
Centisome position: 69.59
GC content: 43.99
Gene sequence:
>1380_bases TTGCACACCATCGAGCAGTTAAAATCGGGGCAGTTAAAAGGAATTAAACGCGTACAGATTGCTGAAGGCTTAACGCAGTT TCCACAAGAAATTTTCTCTCTAGCCGATAGCTTGGAAGTACTGGATCTATCAGGCAATAAACTGAGTGAGTTACCAGATA ATCTAAGTGATTTGCATCAGTTAAAGATCCTGTTCCTCACCGAAAATTGTTTTGAATCTGTTCCGTTAGTGCTTGCACAG TGCCCTAAGCTTGAAATGATCAGCTTTAAGTCGAACAACTTAACGCAACTTCCTGAAAAAGCACTGCCCGATAATACCCG CTGGTTAATTCTAACGGATAATAAGCTTGCCTCTTTGCCTGAAGATATGGGCAGGTTGCATCGACTGCAAAAGCTTGCAT TAGCGGGTAATAAGCTCACTTGCTTACCCGAGGGTATGGCTAAGTGTACTAACTTAGAATTAGCTCGCTTATCGGCAAAT GACTTTGACTCATTGCCAGATTGGTTATTTCAGCTACCACGCCTGAGCTGGTTAGCAGTTGATGGCAGTCCACTTATATC GCAGCAAGACTCAACCGCAGAAGCTGGTGTAGAGCTTATCTCTATGCCAAGAGTGGGTCTTGACGATATCGAGCTGCAAG AAGTCATTGGTCAAGGTGCATCGGGTGTGATTTACCGCGCTAAATGGGTTAACCAACCTCTTGAGTTGATGACAACGCCT GTCTATATTGCAGTCAAAATATTTAAGGGGGAGGTCACCAGTGACGGTTACCCAAAAGATGAATTGGCTAATTGTTTGCA AGCTGGGCAACACAGTAATCTGATCAAGGTTGTTGCAGAGCTTAAGCAAGCGGATAAAACGGGACTCGTGATGGAGCTTA TTCCGAGTCACTACCAAAACTTAGGTCTGCCACCGTCACTAGAGACTTGTACTCGAGATACCTTCGCCAATGAGTCTGTG TTTGAGCTTAAAGCAATACTGCTTATCTTGAAACAGATGGCGTCGGGTCTTGCTCATCTACATCAAAATCAAATCAGTCA TGGCGATATCTACGCTCATAACACCATGTTCAATACCCATGCTGAGATCCTATTTGGCGACTTTGGTGCTGCAACCAACT TAAGCCAGTTACCTATGCAGCAAAGAGAGGCTATGGAGGCAATAGAAGTGCGAGCTTTAGGTTGCTTAATAGAGGATTTA GTCGAGCATTGTCTGCAAAATCCAATGCAAGTAAACCAAGTGATGCTTACTGAGTTATTGCAGTTGAAAGAGGCATGTTT ACAGCCAAGTTTGGGATTACGCCCACGCTTTAAAGAGGTACATGTGCTGTTACAGCAAATGAGTGAGCAGCTCGATTCTG AAGCTTGTTTAAGTGCTTAG
Upstream 100 bases:
>100_bases GTTGGATGATTAATCTCTAACTTTTGAATTTTCCGCGACGATAGCCTTTGAATCGTATAATATTGCGCGCTGTTTTTCAT CGGCATTTAGGATTAAGATT
Downstream 100 bases:
>100_bases AGTTAGTGCTTAGAGTTAGCGCTTAGAGATTGCTTAGCATTAAACATAAAAACGCCGTCAATTGACGGCGTTTTTGTTTG AACAGTTTGATAGATTTGCT
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: Leucine-Rich Repeat-Containing Protein; Protein Kinase; Cytoplasmic Membrane Protein; Leucine-Rich Repeat Protein; Leucine-Rich Repeat-Containing Protein Kinase; Ras Family; Miro-Like Protein; Outer Membrane Protein; Kinase; Phosphoprotein Phosphatase; Serine/Threonine-Protein Kinase-Like Domain Protein; Miro Domain Protein; Miro Domain-Containing Protein; Serine/Threonine-Protein Kinase-Like Domain; Leucine Rich Repeat Domain-Containing Protein; Protein Kinase Domain-Containing Protein; Leucine Rich Repeat Domain Protein; Leucine-Rich Repeat-Containing Protein Typical Subtype; Outermembrane Protein; Protein KinaseLeucine-Rich Repeat Protein; Lipoprotein
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MHTIEQLKSGQLKGIKRVQIAEGLTQFPQEIFSLADSLEVLDLSGNKLSELPDNLSDLHQLKILFLTENCFESVPLVLAQ CPKLEMISFKSNNLTQLPEKALPDNTRWLILTDNKLASLPEDMGRLHRLQKLALAGNKLTCLPEGMAKCTNLELARLSAN DFDSLPDWLFQLPRLSWLAVDGSPLISQQDSTAEAGVELISMPRVGLDDIELQEVIGQGASGVIYRAKWVNQPLELMTTP VYIAVKIFKGEVTSDGYPKDELANCLQAGQHSNLIKVVAELKQADKTGLVMELIPSHYQNLGLPPSLETCTRDTFANESV FELKAILLILKQMASGLAHLHQNQISHGDIYAHNTMFNTHAEILFGDFGAATNLSQLPMQQREAMEAIEVRALGCLIEDL VEHCLQNPMQVNQVMLTELLQLKEACLQPSLGLRPRFKEVHVLLQQMSEQLDSEACLSA
Sequences:
>Translated_459_residues MHTIEQLKSGQLKGIKRVQIAEGLTQFPQEIFSLADSLEVLDLSGNKLSELPDNLSDLHQLKILFLTENCFESVPLVLAQ CPKLEMISFKSNNLTQLPEKALPDNTRWLILTDNKLASLPEDMGRLHRLQKLALAGNKLTCLPEGMAKCTNLELARLSAN DFDSLPDWLFQLPRLSWLAVDGSPLISQQDSTAEAGVELISMPRVGLDDIELQEVIGQGASGVIYRAKWVNQPLELMTTP VYIAVKIFKGEVTSDGYPKDELANCLQAGQHSNLIKVVAELKQADKTGLVMELIPSHYQNLGLPPSLETCTRDTFANESV FELKAILLILKQMASGLAHLHQNQISHGDIYAHNTMFNTHAEILFGDFGAATNLSQLPMQQREAMEAIEVRALGCLIEDL VEHCLQNPMQVNQVMLTELLQLKEACLQPSLGLRPRFKEVHVLLQQMSEQLDSEACLSA >Mature_459_residues MHTIEQLKSGQLKGIKRVQIAEGLTQFPQEIFSLADSLEVLDLSGNKLSELPDNLSDLHQLKILFLTENCFESVPLVLAQ CPKLEMISFKSNNLTQLPEKALPDNTRWLILTDNKLASLPEDMGRLHRLQKLALAGNKLTCLPEGMAKCTNLELARLSAN DFDSLPDWLFQLPRLSWLAVDGSPLISQQDSTAEAGVELISMPRVGLDDIELQEVIGQGASGVIYRAKWVNQPLELMTTP VYIAVKIFKGEVTSDGYPKDELANCLQAGQHSNLIKVVAELKQADKTGLVMELIPSHYQNLGLPPSLETCTRDTFANESV FELKAILLILKQMASGLAHLHQNQISHGDIYAHNTMFNTHAEILFGDFGAATNLSQLPMQQREAMEAIEVRALGCLIEDL VEHCLQNPMQVNQVMLTELLQLKEACLQPSLGLRPRFKEVHVLLQQMSEQLDSEACLSA
Specific function: Unknown
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI95113664, Length=164, Percent_Identity=34.1463414634146, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI110825984, Length=202, Percent_Identity=29.7029702970297, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI8923909, Length=187, Percent_Identity=32.0855614973262, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI55770895, Length=187, Percent_Identity=32.0855614973262, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI154091020, Length=150, Percent_Identity=30.6666666666667, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI6912638, Length=155, Percent_Identity=36.1290322580645, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI256017180, Length=160, Percent_Identity=31.25, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI34577083, Length=142, Percent_Identity=35.9154929577465, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI16904383, Length=186, Percent_Identity=31.1827956989247, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI33859670, Length=160, Percent_Identity=31.25, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI61742786, Length=270, Percent_Identity=30, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI61742784, Length=270, Percent_Identity=30, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI256017174, Length=160, Percent_Identity=31.25, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI197333706, Length=165, Percent_Identity=32.1212121212121, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI34222199, Length=165, Percent_Identity=32.1212121212121, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI122937315, Length=162, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI187829877, Length=165, Percent_Identity=30.9090909090909, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI62241040, Length=165, Percent_Identity=30.9090909090909, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI187829871, Length=165, Percent_Identity=30.9090909090909, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI45827729, Length=159, Percent_Identity=33.9622641509434, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI45827731, Length=159, Percent_Identity=33.9622641509434, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI238908508, Length=164, Percent_Identity=28.6585365853659, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI153792305, Length=143, Percent_Identity=34.965034965035, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI21389431, Length=188, Percent_Identity=29.2553191489362, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI157743290, Length=211, Percent_Identity=30.3317535545024, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI41281398, Length=162, Percent_Identity=31.4814814814815, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI194394161, Length=152, Percent_Identity=30.9210526315789, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI19923729, Length=163, Percent_Identity=30.6748466257669, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI40217803, Length=169, Percent_Identity=34.9112426035503, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI190014581, Length=159, Percent_Identity=32.7044025157233, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71981160, Length=179, Percent_Identity=31.2849162011173, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71981152, Length=179, Percent_Identity=31.2849162011173, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71998904, Length=173, Percent_Identity=34.1040462427746, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71998900, Length=173, Percent_Identity=34.1040462427746, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17537883, Length=173, Percent_Identity=34.1040462427746, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17552452, Length=155, Percent_Identity=34.8387096774194, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71991525, Length=174, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71991531, Length=174, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17550406, Length=149, Percent_Identity=30.8724832214765, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324929, Length=125, Percent_Identity=32.8, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI221379725, Length=173, Percent_Identity=29.4797687861272, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI221379722, Length=173, Percent_Identity=29.4797687861272, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI281362653, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI281362651, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24650334, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24650332, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI62472958, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24650336, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI281362657, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI116007092, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI281362655, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24650330, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI17933612, Length=197, Percent_Identity=31.4720812182741, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI18858105, Length=211, Percent_Identity=27.4881516587678, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922294, Length=159, Percent_Identity=30.8176100628931, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50961; Mature: 50961
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTIEQLKSGQLKGIKRVQIAEGLTQFPQEIFSLADSLEVLDLSGNKLSELPDNLSDLHQ CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCHHHHHH LKILFLTENCFESVPLVLAQCPKLEMISFKSNNLTQLPEKALPDNTRWLILTDNKLASLP HHHHEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCCCEEEEEECCHHHHCH EDMGRLHRLQKLALAGNKLTCLPEGMAKCTNLELARLSANDFDSLPDWLFQLPRLSWLAV HHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCHHEECCCCCCCHHHHHHHHCCCCEEEEE DGSPLISQQDSTAEAGVELISMPRVGLDDIELQEVIGQGASGVIYRAKWVNQPLELMTTP CCCCCCCCCCCHHHHCHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHCCCHHHHCCC VYIAVKIFKGEVTSDGYPKDELANCLQAGQHSNLIKVVAELKQADKTGLVMELIPSHYQN EEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH LGLPPSLETCTRDTFANESVFELKAILLILKQMASGLAHLHQNQISHGDIYAHNTMFNTH CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEECCC AEILFGDFGAATNLSQLPMQQREAMEAIEVRALGCLIEDLVEHCLQNPMQVNQVMLTELL HHHEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QLKEACLQPSLGLRPRFKEVHVLLQQMSEQLDSEACLSA HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCC >Mature Secondary Structure MHTIEQLKSGQLKGIKRVQIAEGLTQFPQEIFSLADSLEVLDLSGNKLSELPDNLSDLHQ CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCHHHHHH LKILFLTENCFESVPLVLAQCPKLEMISFKSNNLTQLPEKALPDNTRWLILTDNKLASLP HHHHEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCCCEEEEEECCHHHHCH EDMGRLHRLQKLALAGNKLTCLPEGMAKCTNLELARLSANDFDSLPDWLFQLPRLSWLAV HHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCHHEECCCCCCCHHHHHHHHCCCCEEEEE DGSPLISQQDSTAEAGVELISMPRVGLDDIELQEVIGQGASGVIYRAKWVNQPLELMTTP CCCCCCCCCCCHHHHCHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHCCCHHHHCCC VYIAVKIFKGEVTSDGYPKDELANCLQAGQHSNLIKVVAELKQADKTGLVMELIPSHYQN EEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH LGLPPSLETCTRDTFANESVFELKAILLILKQMASGLAHLHQNQISHGDIYAHNTMFNTH CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEECCC AEILFGDFGAATNLSQLPMQQREAMEAIEVRALGCLIEDLVEHCLQNPMQVNQVMLTELL HHHEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QLKEACLQPSLGLRPRFKEVHVLLQQMSEQLDSEACLSA HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA