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The map label for this gene is skp [H]

Identifier: 157962695

GI number: 157962695

Start: 3513325

End: 3513822

Strand: Reverse

Name: skp [H]

Synonym: Spea_2876

Alternate gene names: 157962695

Gene position: 3513822-3513325 (Counterclockwise)

Preceding gene: 157962696

Following gene: 157962694

Centisome position: 67.91

GC content: 44.18

Gene sequence:

>498_bases
ATGTTGAATCGCGCAGTGATGGTTATGGTTCTTATGGGTGCACCTTTAGCGGCGCATGCAGAGAAGATTGCAGTAGTTGA
TATGCAGGCTGTATTTGAGCAGTTACCTCAGCGTGAGCAAGTGAATGAGACATTAAAAGCTGAGTTTGGTGATCGTGTTG
CAGCCGTGCAAAAAATGCAGGAAGAGCTTCGTAGTTTGCTTGAAAAGCAACAACGTGATGCGGCGCTAATGAGCGAGTCT
CAGAAGACTGACATGATGCGTAAAATGGAGTCTATGAAAGCTGAGCTACAATTAAAGGGCAAAGCGTTAGATGAAGATAT
GCGTCGTCGTAACGGTGAAGAGCAAAACAAGCTGCTTCTAGAAGTTCAAAAGACAATTAACTCTATTGCTGAAAAAGAGC
AGTATGACATGGTGCTTCAACGCGGCGCCGTTATCTATGTTAAGCCTAGCGCTGACATCAGTAACAAAGTGGTTGAAGCT
TTAGGTAAAGGCAAGTAA

Upstream 100 bases:

>100_bases
GAAACAGAGATCTTCTCGTTTAATATTGGTAAAACTTTCTAAAATCAATTTAAAAAAATCGGCAAGTTTTGCTGAGATAA
AGGAGTATGTTTTGAATAAG

Downstream 100 bases:

>100_bases
ATAGATGAAAAGCTATACTTTAAGAGTACTGGCTGACCATTTAAATGCAGATGTTCAAGGTGATGATACAGTTGAGATCT
CAGCTGTAGGCACCTTGGAC

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MLNRAVMVMVLMGAPLAAHAEKIAVVDMQAVFEQLPQREQVNETLKAEFGDRVAAVQKMQEELRSLLEKQQRDAALMSES
QKTDMMRKMESMKAELQLKGKALDEDMRRRNGEEQNKLLLEVQKTINSIAEKEQYDMVLQRGAVIYVKPSADISNKVVEA
LGKGK

Sequences:

>Translated_165_residues
MLNRAVMVMVLMGAPLAAHAEKIAVVDMQAVFEQLPQREQVNETLKAEFGDRVAAVQKMQEELRSLLEKQQRDAALMSES
QKTDMMRKMESMKAELQLKGKALDEDMRRRNGEEQNKLLLEVQKTINSIAEKEQYDMVLQRGAVIYVKPSADISNKVVEA
LGKGK
>Mature_165_residues
MLNRAVMVMVLMGAPLAAHAEKIAVVDMQAVFEQLPQREQVNETLKAEFGDRVAAVQKMQEELRSLLEKQQRDAALMSES
QKTDMMRKMESMKAELQLKGKALDEDMRRRNGEEQNKLLLEVQKTINSIAEKEQYDMVLQRGAVIYVKPSADISNKVVEA
LGKGK

Specific function: Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm [H]

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

Organism=Escherichia coli, GI1786375, Length=145, Percent_Identity=29.6551724137931, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 18677; Mature: 18677

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRAVMVMVLMGAPLAAHAEKIAVVDMQAVFEQLPQREQVNETLKAEFGDRVAAVQKMQ
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EELRSLLEKQQRDAALMSESQKTDMMRKMESMKAELQLKGKALDEDMRRRNGEEQNKLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH
EVQKTINSIAEKEQYDMVLQRGAVIYVKPSADISNKVVEALGKGK
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLNRAVMVMVLMGAPLAAHAEKIAVVDMQAVFEQLPQREQVNETLKAEFGDRVAAVQKMQ
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EELRSLLEKQQRDAALMSESQKTDMMRKMESMKAELQLKGKALDEDMRRRNGEEQNKLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH
EVQKTINSIAEKEQYDMVLQRGAVIYVKPSADISNKVVEALGKGK
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]