Click here to switch to the map view.

The map label for this gene is 157962685

Identifier: 157962685

GI number: 157962685

Start: 3500134

End: 3500862

Strand: Reverse

Name: 157962685

Synonym: Spea_2866

Alternate gene names: NA

Gene position: 3500862-3500134 (Counterclockwise)

Preceding gene: 157962686

Following gene: 157962682

Centisome position: 67.65

GC content: 45.54

Gene sequence:

>729_bases
GTGCATTATCTTTTGTTTATCTTGCTAGCGCCCATCCTATTTTTTCAGGGCCGAATAGTTAAGAAAATCACCCCTCAATT
ACCCGAAGCAGCAGGTCCAAGGCATGGCTCTGCTGGTGAAGGCAAAGCAATGTCGGTATTAATTTTAGGTGATAGCGCGG
CAGCGGGAGTCGGTGTCGAATATCAGAATCAAGCATTAACAGGCGTTGTTGTTAATCATCTTGCTCAGTTATATCAGGTC
GATTGGCGTTTATTAGCTAAGTCTGGCCATAACACTGCGCAGACAATTGATATGTTGCAACAAGCGTTAGCTAATCAGCA
TGGCATGCGCTTTGAGGCTGTGGTTGTTTCGCTTGGTGTAAATGATGTTCTAAGTCCATTAACCGTCAATAAATGGATAA
GACAACAACAAGCTTTAATTGAGCTTATAACTCGAGAGTTGAACTGCCGGCACCTGATCCTGACGCGAGTGCCACCTATG
GGAGATTTTCCCGTGCTGCCGCAGCCATTGCGTTGGTTTCTAGGTCAGCGCAGTCAAGCCTTCAATCGCCAGTTACTGCG
TTATGCACAGCGAGAACCAAGGTTTACTCTGTTAGATTTTGGGCATCAACTTAATTGTGATGCAATGGCGACTGATGGCT
TTCATCCGGGAGAGTTAATTTATAAAGACTGGGGAAAGAGCGTGGTGAATGTGCTTTTGGCGCAAGAAAGCAGCTCTGAC
GTTAATTGA

Upstream 100 bases:

>100_bases
AGATATTTCTTTTGCAAGGTTAGGTTGCGGCTAGAGAGCAAAGATTGGCTATAGTTGTTTGTTATTAGCTTAAGCAGTCG
TAAAAGCAAGGAGTGGTCTA

Downstream 100 bases:

>100_bases
TATTAAAAAAGTGCTTAATTTCATCAATCTGACACATGGCATCTTCATAGCCCAATTCTATTAAAGCACTGCAGTAGCCT
TGCTCAAACAGTAGATAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: GDSL-Like Lipase/Acylhydrolase; GDSL Family Lipase; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; Lysophospholipase; Lysophospholipase L1 And Related Esterase-Like Protein; SGNH Hydrolase; G-D-S-L Family Lipolytic Protein; Lipolytic Protein G-D-S-L Family; G-D-S-L Lipolytic Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MHYLLFILLAPILFFQGRIVKKITPQLPEAAGPRHGSAGEGKAMSVLILGDSAAAGVGVEYQNQALTGVVVNHLAQLYQV
DWRLLAKSGHNTAQTIDMLQQALANQHGMRFEAVVVSLGVNDVLSPLTVNKWIRQQQALIELITRELNCRHLILTRVPPM
GDFPVLPQPLRWFLGQRSQAFNRQLLRYAQREPRFTLLDFGHQLNCDAMATDGFHPGELIYKDWGKSVVNVLLAQESSSD
VN

Sequences:

>Translated_242_residues
MHYLLFILLAPILFFQGRIVKKITPQLPEAAGPRHGSAGEGKAMSVLILGDSAAAGVGVEYQNQALTGVVVNHLAQLYQV
DWRLLAKSGHNTAQTIDMLQQALANQHGMRFEAVVVSLGVNDVLSPLTVNKWIRQQQALIELITRELNCRHLILTRVPPM
GDFPVLPQPLRWFLGQRSQAFNRQLLRYAQREPRFTLLDFGHQLNCDAMATDGFHPGELIYKDWGKSVVNVLLAQESSSD
VN
>Mature_242_residues
MHYLLFILLAPILFFQGRIVKKITPQLPEAAGPRHGSAGEGKAMSVLILGDSAAAGVGVEYQNQALTGVVVNHLAQLYQV
DWRLLAKSGHNTAQTIDMLQQALANQHGMRFEAVVVSLGVNDVLSPLTVNKWIRQQQALIELITRELNCRHLILTRVPPM
GDFPVLPQPLRWFLGQRSQAFNRQLLRYAQREPRFTLLDFGHQLNCDAMATDGFHPGELIYKDWGKSVVNVLLAQESSSD
VN

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26984; Mature: 26984

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYLLFILLAPILFFQGRIVKKITPQLPEAAGPRHGSAGEGKAMSVLILGDSAAAGVGVE
CHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
YQNQALTGVVVNHLAQLYQVDWRLLAKSGHNTAQTIDMLQQALANQHGMRFEAVVVSLGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEHHEEECCH
NDVLSPLTVNKWIRQQQALIELITRELNCRHLILTRVPPMGDFPVLPQPLRWFLGQRSQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHH
FNRQLLRYAQREPRFTLLDFGHQLNCDAMATDGFHPGELIYKDWGKSVVNVLLAQESSSD
HHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
VN
CC
>Mature Secondary Structure
MHYLLFILLAPILFFQGRIVKKITPQLPEAAGPRHGSAGEGKAMSVLILGDSAAAGVGVE
CHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
YQNQALTGVVVNHLAQLYQVDWRLLAKSGHNTAQTIDMLQQALANQHGMRFEAVVVSLGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEHHEEECCH
NDVLSPLTVNKWIRQQQALIELITRELNCRHLILTRVPPMGDFPVLPQPLRWFLGQRSQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHH
FNRQLLRYAQREPRFTLLDFGHQLNCDAMATDGFHPGELIYKDWGKSVVNVLLAQESSSD
HHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
VN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA