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The map label for this gene is etfB [H]

Identifier: 157962674

GI number: 157962674

Start: 3486445

End: 3487194

Strand: Reverse

Name: etfB [H]

Synonym: Spea_2855

Alternate gene names: 157962674

Gene position: 3487194-3486445 (Counterclockwise)

Preceding gene: 157962682

Following gene: 157962673

Centisome position: 67.39

GC content: 46.4

Gene sequence:

>750_bases
ATGAAAGTATTGGTGCCAGTTAAACGTGTCGTCGATGCCAATGTAAAAGTCAGGGTTAATGCTGACAATACTGGTGTTGA
TACCGCAAACCTAAAAATGGCGATTAACCCTTTTTGTGAAATTGCCGTTGAAGAAGCCGTTCGTTTAAAGGAAGCAGGAA
GCGCCTCTGAAATTGTCGTATTAAGCATCGGCCCTAAAGCATCCCAAGAGCAGTTAAGAACAGCGCTTGCGTTGGGAGCA
GACCGTGCCATTCATATCGAAACAGAAGAGGACTTAGTGCCGCTGTCGATCGCCAAGCTGATTCATGCTGTGCAACAAAA
AGAGCAGGCAGAGTTGGTTATCTTAGGTAAGCAGTCAATTGACGGTGATAACAATCAAACCGGACAGATGCTTGCCGCTA
TTGCCAAGATGCCACAAGCAACGTTTGCCTCAGAAGTTAAACTCGATGGTGATAAGCTCGTTGTGATCCGTGAAATCGAT
GGTGGCCTACAAACAATCAGGTTGCCACTGCCAGCGGTTGTGACTGCGGACCTTCGTCTAAATGAGCCACGCTATGCCAA
GCTTCCTAATATTATGAAAGCAAAGCGCAAACCTCTTGAAGCTCTGACACCAGCAGATTTTGATGTCACCCTTAAGTCTC
ACCAGAATATCCTTAAGGTTGCCCCACCAGCTGAGCGTAGCGGTGGTGTGATGGTTGCGTCTGTAGAAGAGTTGGTTGAA
AAGTTAAAGAATGAAGCGAAGGTGATCTAA

Upstream 100 bases:

>100_bases
ACGTAAAGTGGCTTTAATTTCGGTAATAGTCGCAACAGCGTTATACCTGTGGCTCGTTACTTAATTTCGAACATTATAAG
AGACGTAAGAAGGAAGCCCT

Downstream 100 bases:

>100_bases
TGGCAATTTTAATATTAGCAGAACACGATAACGCCAGTTTAAAGCTAGATACCGCTAAAGTGGTTGCATGCGGTCAAGCC
ATTGGTGGAGATATAGACGT

Product: electron transfer flavoprotein subunit alpha/beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVVLSIGPKASQEQLRTALALGA
DRAIHIETEEDLVPLSIAKLIHAVQQKEQAELVILGKQSIDGDNNQTGQMLAAIAKMPQATFASEVKLDGDKLVVIREID
GGLQTIRLPLPAVVTADLRLNEPRYAKLPNIMKAKRKPLEALTPADFDVTLKSHQNILKVAPPAERSGGVMVASVEELVE
KLKNEAKVI

Sequences:

>Translated_249_residues
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVVLSIGPKASQEQLRTALALGA
DRAIHIETEEDLVPLSIAKLIHAVQQKEQAELVILGKQSIDGDNNQTGQMLAAIAKMPQATFASEVKLDGDKLVVIREID
GGLQTIRLPLPAVVTADLRLNEPRYAKLPNIMKAKRKPLEALTPADFDVTLKSHQNILKVAPPAERSGGVMVASVEELVE
KLKNEAKVI
>Mature_249_residues
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVVLSIGPKASQEQLRTALALGA
DRAIHIETEEDLVPLSIAKLIHAVQQKEQAELVILGKQSIDGDNNQTGQMLAAIAKMPQATFASEVKLDGDKLVVIREID
GGLQTIRLPLPAVVTADLRLNEPRYAKLPNIMKAKRKPLEALTPADFDVTLKSHQNILKVAPPAERSGGVMVASVEELVE
KLKNEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=56.3492063492063, Blast_Score=280, Evalue=1e-75,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=55.6962025316456, Blast_Score=261, Evalue=5e-70,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082158, Length=127, Percent_Identity=31.496062992126, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=47.8260869565217, Blast_Score=217, Evalue=4e-57,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=47.2, Blast_Score=208, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=52.0325203252033, Blast_Score=224, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=52.0325203252033, Blast_Score=224, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26865; Mature: 26865

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVV
CCEEECCHHHHCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEE
LSIGPKASQEQLRTALALGADRAIHIETEEDLVPLSIAKLIHAVQQKEQAELVILGKQSI
EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
DGDNNQTGQMLAAIAKMPQATFASEVKLDGDKLVVIREIDGGLQTIRLPLPAVVTADLRL
CCCCCCHHHHHHHHHHCCCHHHHHHEEECCCEEEEEEECCCCEEEEEECCCEEEEECEEE
NEPRYAKLPNIMKAKRKPLEALTPADFDVTLKSHQNILKVAPPAERSGGVMVASVEELVE
CCCCCCCCCHHHHHHCCCCHHCCCCCCEEEECCCCCEEEECCCCCCCCCEEEEEHHHHHH
KLKNEAKVI
HHHHHCCCC
>Mature Secondary Structure
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVV
CCEEECCHHHHCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEE
LSIGPKASQEQLRTALALGADRAIHIETEEDLVPLSIAKLIHAVQQKEQAELVILGKQSI
EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
DGDNNQTGQMLAAIAKMPQATFASEVKLDGDKLVVIREIDGGLQTIRLPLPAVVTADLRL
CCCCCCHHHHHHHHHHCCCHHHHHHEEECCCEEEEEEECCCCEEEEEECCCEEEEECEEE
NEPRYAKLPNIMKAKRKPLEALTPADFDVTLKSHQNILKVAPPAERSGGVMVASVEELVE
CCCCCCCCCHHHHHHCCCCHHCCCCCCEEEECCCCCEEEECCCCCCCCCEEEEEHHHHHH
KLKNEAKVI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]