| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962639
Identifier: 157962639
GI number: 157962639
Start: 3440799
End: 3442823
Strand: Reverse
Name: 157962639
Synonym: Spea_2819
Alternate gene names: NA
Gene position: 3442823-3440799 (Counterclockwise)
Preceding gene: 157962640
Following gene: 157962638
Centisome position: 66.53
GC content: 46.42
Gene sequence:
>2025_bases ATGCGTTTAATTAAACCTTTTTCATTAAACCTGATCACCTTAGCGTTACTAGGTGCAGGAACCAGCGCGTTTGCGGCTGA TTTTGGTGTGCAAAATGCCAATATTACCGCCGGTAAAACCGCTAATTATCAATGTAAGCGTTGTGTTGAGACTCAAGGTT ACACTGGTAGTGTTGGTGTGAGTGTTGGCGCGATTGATGCCGATGATAATCATGCCATCAACCAGTTTGGCACCGGCGAA GACGGTGCTATTGCAGGCGTCAATGCCGACCTTGCTTATCAGCAAAGTGGCTATAAAGCGAAAGTTCAAGCCCATCAGTT GGGTATGGATAACGGCTTTGTGACCATGGAAGCGGGTAAGAGCGGTCATTATAAGCTAGATGTTGATTTTCAGACGATTA CCACTAATCAAGGCAGTAATGCCTCGACTAATCTTTGGCAAAACAATGGCATGCTAACGCCAAGCGATCAGACTCGCGTA TTGGATTTAGCGCTACAAAGACAGCGCAGTGGTATCGGATTTGAGTATGACTTCTCTGAAGTATTAGGTCTAGGCCTTAG CAGCTATGCACGCTACGACCGTGAAGATAAAACCGGTCACCGCAGCGCAAGCCTCACTAGCCCACGCCCAACTAACTTTG CTGAAGCGGTTGATGAAACCACAGATAAGTTCAGTGCCGGTGTGGTGCTTGATGGCGCTAACTGGTTGTCAGAGCTGAGC TACAACGGCTCACGCTATGACAACAACATGGGCGATTTAAGTCTGCTTTACGCCTATGACGTATACAGTGCAACACCTGA TAACCAAGCGCACCAAGTGTCGCTATCTGGTCAGTACCGTTTAGCTTCTAGCGTGTTTAGTGGTCGTGTGGTTACCGGTC GTATGATCCAAGATCAAGACCTTATCCAGATGAGTGGAAACCCAATTCAAAATTGGGACGGTCAGGTTGATACCTTAAGC TCAAACCTAGCGGCAAGCACGCGAGTAAGCAATCGCTTACGTCTAGGCGCAAGCTATGACTACAGCAAGCGTGATAACCG CTCATCGGTATTTGACTTTGCTCAGTACGAGTTCAATTCAATGTCAGGTGCGTTTAAACAAAACGTGCCAATGGATATTG AGCGTCAAACCTTTAAAACCAACGCAAGTTACCGTATTGCCAGTGGTTACCGCTTACAAGCGGGTTACGACTATAAGCAA GTTGAACGTAGTTATGGTGAGCGCGAAGAAACCCGTGACAATGAGTTTTGGAGCAAGCTAAACATCCGTGCGATTGACAA GCTAACCCTAGATTTTGGTGTCAGCTATGGCGAGCGAGGTGGCAGTGACTACCAAGCTAATGAGCTAACCAGCGACGAAA CTGAATCGTTAATGCGTAAGTACAACCTTGCCGATCGCAAGCGCAGCGAAGTTAACGCCAGAGCGAGCTACGTGCCGCTT GAGTGGTTAACTTTCGATGTTAGCACTTACTACGCCAATGACGACTATGACGCAACTGAAATCGGCCTGACTCAGGCTAA AGATTACGGTTACGACATCAACGTACATGCACAAATCACCGAACCATTATCTGTATATGCCTTTGCGGGTCAGCAGTGGA TTGATTCAGACCAAAACGGTGACCAAGCGTCAGTTTGGCACACAGAGGTTAATGATGAATTCATTAATCTTGGTTTGGGT GCGACTTACACAGGACTAATGGATGGCAGATTGATTTTAGGTAGTGACTACCTATTTGCTAACTCATCAAGTAATACCGG TGTGAATGGTTACAACACAGACAGTGCCAATATCAACAGCTATGGCAGTTATTACTCGTATAACCACAGCGTGAGTTTAT ACGGGCAATACCTGATCTCTGAGCAAATGGCTGTCAAGTTGGCTTACCAGTTTGAACGTTATTTTGATACCGATAGTGCT GCGGTCACTCCCGATAGTATTCCAGGTTTAGTGACCTTGGGTGACCTGAACCACAATTACAACGCCCATCAACTGATGTT GACCTTCAGCTACAAGCTGAAATAA
Upstream 100 bases:
>100_bases TCAGTGCGGGTAAGAGTTGTTTAAATTGCCACAGCAAGATCCATGGTTCTAACCATCCTGCTGGCAGCAACTTTGCCCGT TAAGTCTAGGAGTGACAAAT
Downstream 100 bases:
>100_bases GTCGAGTCAGATATTAATAAGTTTGAGGAAAACAAGATTATGGAACGTAGAAGTTTCTTAAAAATGAGTGCCGCGCTGGG CTGCGCTGCAACAGTTACCG
Product: outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein MtrB; Outer Membrane Protein MtrB
Number of amino acids: Translated: 674; Mature: 674
Protein sequence:
>674_residues MRLIKPFSLNLITLALLGAGTSAFAADFGVQNANITAGKTANYQCKRCVETQGYTGSVGVSVGAIDADDNHAINQFGTGE DGAIAGVNADLAYQQSGYKAKVQAHQLGMDNGFVTMEAGKSGHYKLDVDFQTITTNQGSNASTNLWQNNGMLTPSDQTRV LDLALQRQRSGIGFEYDFSEVLGLGLSSYARYDREDKTGHRSASLTSPRPTNFAEAVDETTDKFSAGVVLDGANWLSELS YNGSRYDNNMGDLSLLYAYDVYSATPDNQAHQVSLSGQYRLASSVFSGRVVTGRMIQDQDLIQMSGNPIQNWDGQVDTLS SNLAASTRVSNRLRLGASYDYSKRDNRSSVFDFAQYEFNSMSGAFKQNVPMDIERQTFKTNASYRIASGYRLQAGYDYKQ VERSYGEREETRDNEFWSKLNIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYVPL EWLTFDVSTYYANDDYDATEIGLTQAKDYGYDINVHAQITEPLSVYAFAGQQWIDSDQNGDQASVWHTEVNDEFINLGLG ATYTGLMDGRLILGSDYLFANSSSNTGVNGYNTDSANINSYGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSA AVTPDSIPGLVTLGDLNHNYNAHQLMLTFSYKLK
Sequences:
>Translated_674_residues MRLIKPFSLNLITLALLGAGTSAFAADFGVQNANITAGKTANYQCKRCVETQGYTGSVGVSVGAIDADDNHAINQFGTGE DGAIAGVNADLAYQQSGYKAKVQAHQLGMDNGFVTMEAGKSGHYKLDVDFQTITTNQGSNASTNLWQNNGMLTPSDQTRV LDLALQRQRSGIGFEYDFSEVLGLGLSSYARYDREDKTGHRSASLTSPRPTNFAEAVDETTDKFSAGVVLDGANWLSELS YNGSRYDNNMGDLSLLYAYDVYSATPDNQAHQVSLSGQYRLASSVFSGRVVTGRMIQDQDLIQMSGNPIQNWDGQVDTLS SNLAASTRVSNRLRLGASYDYSKRDNRSSVFDFAQYEFNSMSGAFKQNVPMDIERQTFKTNASYRIASGYRLQAGYDYKQ VERSYGEREETRDNEFWSKLNIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYVPL EWLTFDVSTYYANDDYDATEIGLTQAKDYGYDINVHAQITEPLSVYAFAGQQWIDSDQNGDQASVWHTEVNDEFINLGLG ATYTGLMDGRLILGSDYLFANSSSNTGVNGYNTDSANINSYGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSA AVTPDSIPGLVTLGDLNHNYNAHQLMLTFSYKLK >Mature_674_residues MRLIKPFSLNLITLALLGAGTSAFAADFGVQNANITAGKTANYQCKRCVETQGYTGSVGVSVGAIDADDNHAINQFGTGE DGAIAGVNADLAYQQSGYKAKVQAHQLGMDNGFVTMEAGKSGHYKLDVDFQTITTNQGSNASTNLWQNNGMLTPSDQTRV LDLALQRQRSGIGFEYDFSEVLGLGLSSYARYDREDKTGHRSASLTSPRPTNFAEAVDETTDKFSAGVVLDGANWLSELS YNGSRYDNNMGDLSLLYAYDVYSATPDNQAHQVSLSGQYRLASSVFSGRVVTGRMIQDQDLIQMSGNPIQNWDGQVDTLS SNLAASTRVSNRLRLGASYDYSKRDNRSSVFDFAQYEFNSMSGAFKQNVPMDIERQTFKTNASYRIASGYRLQAGYDYKQ VERSYGEREETRDNEFWSKLNIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYVPL EWLTFDVSTYYANDDYDATEIGLTQAKDYGYDINVHAQITEPLSVYAFAGQQWIDSDQNGDQASVWHTEVNDEFINLGLG ATYTGLMDGRLILGSDYLFANSSSNTGVNGYNTDSANINSYGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSA AVTPDSIPGLVTLGDLNHNYNAHQLMLTFSYKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74635; Mature: 74635
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIKPFSLNLITLALLGAGTSAFAADFGVQNANITAGKTANYQCKRCVETQGYTGSVGV CCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCE SVGAIDADDNHAINQFGTGEDGAIAGVNADLAYQQSGYKAKVQAHQLGMDNGFVTMEAGK EEEEEECCCCCCHHCCCCCCCCEEEECCCCEEECCCCCEEEEEHEECCCCCCEEEEECCC SGHYKLDVDFQTITTNQGSNASTNLWQNNGMLTPSDQTRVLDLALQRQRSGIGFEYDFSE CCCEEEEEEEEEEECCCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHCCCCEEECHHH VLGLGLSSYARYDREDKTGHRSASLTSPRPTNFAEAVDETTDKFSAGVVLDGANWLSELS HHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHC YNGSRYDNNMGDLSLLYAYDVYSATPDNQAHQVSLSGQYRLASSVFSGRVVTGRMIQDQD CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCEEEHHHHHCCCEEEEEEECCCC LIQMSGNPIQNWDGQVDTLSSNLAASTRVSNRLRLGASYDYSKRDNRSSVFDFAQYEFNS HHEECCCCCCCCCCCHHHHHCCHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHC MSGAFKQNVPMDIERQTFKTNASYRIASGYRLQAGYDYKQVERSYGEREETRDNEFWSKL CCCHHHCCCCCCCCCHHEECCCCEEEECCEEEECCCCHHHHHHHHCCHHHCCCHHHHHHC NIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYVPL CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEE EWLTFDVSTYYANDDYDATEIGLTQAKDYGYDINVHAQITEPLSVYAFAGQQWIDSDQNG EEEEEEEEEEEECCCCCCHHCCCEECCCCCEEEEEEEEECCCEEEEEECCCHHCCCCCCC DQASVWHTEVNDEFINLGLGATYTGLMDGRLILGSDYLFANSSSNTGVNGYNTDSANINS CCCEEEEEECCCCEEEECCCCEEEEEECCEEEEECCEEEECCCCCCCCCCCCCCCCCCCC YGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSAAVTPDSIPGLVTLGDLNHNY CCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC NAHQLMLTFSYKLK CCEEEEEEEEEECC >Mature Secondary Structure MRLIKPFSLNLITLALLGAGTSAFAADFGVQNANITAGKTANYQCKRCVETQGYTGSVGV CCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCE SVGAIDADDNHAINQFGTGEDGAIAGVNADLAYQQSGYKAKVQAHQLGMDNGFVTMEAGK EEEEEECCCCCCHHCCCCCCCCEEEECCCCEEECCCCCEEEEEHEECCCCCCEEEEECCC SGHYKLDVDFQTITTNQGSNASTNLWQNNGMLTPSDQTRVLDLALQRQRSGIGFEYDFSE CCCEEEEEEEEEEECCCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHCCCCEEECHHH VLGLGLSSYARYDREDKTGHRSASLTSPRPTNFAEAVDETTDKFSAGVVLDGANWLSELS HHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHC YNGSRYDNNMGDLSLLYAYDVYSATPDNQAHQVSLSGQYRLASSVFSGRVVTGRMIQDQD CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCEEEHHHHHCCCEEEEEEECCCC LIQMSGNPIQNWDGQVDTLSSNLAASTRVSNRLRLGASYDYSKRDNRSSVFDFAQYEFNS HHEECCCCCCCCCCCHHHHHCCHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHC MSGAFKQNVPMDIERQTFKTNASYRIASGYRLQAGYDYKQVERSYGEREETRDNEFWSKL CCCHHHCCCCCCCCCHHEECCCCEEEECCEEEECCCCHHHHHHHHCCHHHCCCHHHHHHC NIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYVPL CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEE EWLTFDVSTYYANDDYDATEIGLTQAKDYGYDINVHAQITEPLSVYAFAGQQWIDSDQNG EEEEEEEEEEEECCCCCCHHCCCEECCCCCEEEEEEEEECCCEEEEEECCCHHCCCCCCC DQASVWHTEVNDEFINLGLGATYTGLMDGRLILGSDYLFANSSSNTGVNGYNTDSANINS CCCEEEEEECCCCEEEECCCCEEEEEECCEEEEECCEEEECCCCCCCCCCCCCCCCCCCC YGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSAAVTPDSIPGLVTLGDLNHNY CCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC NAHQLMLTFSYKLK CCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA