Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yeiJ [C]

Identifier: 157962584

GI number: 157962584

Start: 3375598

End: 3376806

Strand: Reverse

Name: yeiJ [C]

Synonym: Spea_2763

Alternate gene names: 157962584

Gene position: 3376806-3375598 (Counterclockwise)

Preceding gene: 157962585

Following gene: 157962575

Centisome position: 65.26

GC content: 47.97

Gene sequence:

>1209_bases
ATGCAGTTGTTGATCAGTTTAGTCGGAATTTCTTTTCTCGTTCTCTGTGGGTGGATTTTTTCTGAAAATCGCCATGCGAT
TAAGTGGCGCACGGTACTTGGGGCGTTTGCCTTGCAAGCTGCGTTAGCTGCCTTAGTTTTGTATGTGCCTATGGGCCAAA
ACATTCTAGGCTCTGTGAGTCAGGGCGTTGCCTCTGTATTAAGTTTTGCCGATGAGGGAATTAACTTCCTGTTTGGCGAC
CTTGCCACCAACAGCTTTGTGTTCGCTATTCGTGTGCTTCCTCTAGTTATCTTTATTAGTGCCTTAATCTCTATGTTGTA
TTACTTCGGTATTATGCAGTGGGTGATTAAAGTGATGGGGGGCGCACTGCAAAAGTTACTAGGGATCAGCCGTGCAGAAT
CATTGGTGACCACGGGCAATATCTTCTTAAGCCAAGGCGAATCGCCTTTACTAGTTAAGCCATTCTTACCTAAGATGACT
CGCTCAGAGCTATTTGCGGTGATGACGGGCGGTATGGCGTCGGTGGCTGGCAGTGTGTTAGGTGGTTATGCGGGTCTGGG
GGTCGAGCTTAAATACTTGATTGCGGCAAGCTTTATGGCGGCGCCAGGTAGCTTGATGATGGCAAAGCTATTGGTGCCTG
AAACAGGCTATCCTGAGTCGCAGCAAAGCGTCGATATGAGTCAGAGTGAACACAGTAATGTGGTTGATGCACTTGCCTCC
GGTGCGATGAATGGTATGCGCGTGGCTGTGGCTATCGGTACCATGTTATTAGCCTTTATCAGTGTGATTGCCATGTTTAA
TGCGGGTCTTGAGCAAGTGGGCACTTGGTTTAACCTTGAAGGCGTGACCATGCAAAGCTTGCTGGGTTACATTTTTGCAC
CAGTGGCATTTTTAATTGGTGTGCCAGCCAACGAGATGATGCAGGCGGGAAGCTTTATCGGTCAAAAGCTGATCCTTAAC
GAGTTCGTGGCCTTTATGGATTTCACCGAAGTTAAAGAGCAACTATCGATGCACTCTCAGGTGATCATCACCTTCGCATT
ATGTGGCTTTGCTAACATAGGCTCGATTGCGATTCAGCTAGGCAGTATCGGTGTGATGGCACCAGAGCGTCGCAGCGAAG
TGGCAAACCTTGGTTTAAAAGCGGTACTTGCCGCGACTCTTGCAAACTTAATGAGCGCCGCGTTAGCTGGTATTTTCATT
AGCCTATAA

Upstream 100 bases:

>100_bases
CGCTTTTATTAAAGCATTCCCCATCTTCTATACATTTACGACCGCCTGCTACTTAACTCTTTCTATATAAACATTTTATA
TTTAAAAAATGAGATAAATT

Downstream 100 bases:

>100_bases
TTTGTCTGTGATTGTCAGTTGATTAAAGCGTTATTCGAGTCCAGCAACAAAAAGAGCAGCTTAGCTGCTCTTTTTGTTTG
GTTCTTTTTCGGGGGCAGAG

Product: nucleoside transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVSQGVASVLSFADEGINFLFGD
LATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMGGALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMT
RSELFAVMTGGMASVAGSVLGGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS
GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIGVPANEMMQAGSFIGQKLILN
EFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQLGSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFI
SL

Sequences:

>Translated_402_residues
MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVSQGVASVLSFADEGINFLFGD
LATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMGGALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMT
RSELFAVMTGGMASVAGSVLGGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS
GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIGVPANEMMQAGSFIGQKLILN
EFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQLGSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFI
SL
>Mature_402_residues
MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVSQGVASVLSFADEGINFLFGD
LATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMGGALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMT
RSELFAVMTGGMASVAGSVLGGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS
GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIGVPANEMMQAGSFIGQKLILN
EFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQLGSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFI
SL

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI11545853, Length=417, Percent_Identity=36.9304556354916, Blast_Score=271, Evalue=1e-72,
Organism=Homo sapiens, GI42542381, Length=412, Percent_Identity=36.6504854368932, Blast_Score=269, Evalue=3e-72,
Organism=Homo sapiens, GI227116277, Length=414, Percent_Identity=34.0579710144928, Blast_Score=266, Evalue=3e-71,
Organism=Escherichia coli, GI1788485, Length=418, Percent_Identity=42.1052631578947, Blast_Score=322, Evalue=2e-89,
Organism=Escherichia coli, GI1788488, Length=415, Percent_Identity=42.1686746987952, Blast_Score=314, Evalue=7e-87,
Organism=Escherichia coli, GI1788737, Length=380, Percent_Identity=31.8421052631579, Blast_Score=190, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17560276, Length=400, Percent_Identity=33.25, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI71991794, Length=403, Percent_Identity=33.4987593052109, Blast_Score=211, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI25146537, Length=208, Percent_Identity=35.0961538461538, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI45552517, Length=402, Percent_Identity=37.5621890547264, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI19921868, Length=402, Percent_Identity=37.5621890547264, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI45552519, Length=402, Percent_Identity=37.5621890547264, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI281360430, Length=399, Percent_Identity=36.5914786967419, Blast_Score=251, Evalue=8e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 42586; Mature: 42586

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVS
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
QGVASVLSFADEGINFLFGDLATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMG
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMTRSELFAVMTGGMASVAGSVL
HHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHH
GGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHH
GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCHHHHHHHHHHHHHHHHHC
VPANEMMQAGSFIGQKLILNEFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFISL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLLISLVGISFLVLCGWIFSENRHAIKWRTVLGAFALQAALAALVLYVPMGQNILGSVS
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
QGVASVLSFADEGINFLFGDLATNSFVFAIRVLPLVIFISALISMLYYFGIMQWVIKVMG
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALQKLLGISRAESLVTTGNIFLSQGESPLLVKPFLPKMTRSELFAVMTGGMASVAGSVL
HHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHH
GGYAGLGVELKYLIAASFMAAPGSLMMAKLLVPETGYPESQQSVDMSQSEHSNVVDALAS
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHH
GAMNGMRVAVAIGTMLLAFISVIAMFNAGLEQVGTWFNLEGVTMQSLLGYIFAPVAFLIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCHHHHHHHHHHHHHHHHHC
VPANEMMQAGSFIGQKLILNEFVAFMDFTEVKEQLSMHSQVIITFALCGFANIGSIAIQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GSIGVMAPERRSEVANLGLKAVLAATLANLMSAALAGIFISL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]