| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is bmpA [H]
Identifier: 157962541
GI number: 157962541
Start: 3325479
End: 3326480
Strand: Reverse
Name: bmpA [H]
Synonym: Spea_2720
Alternate gene names: 157962541
Gene position: 3326480-3325479 (Counterclockwise)
Preceding gene: 157962548
Following gene: 157962540
Centisome position: 64.29
GC content: 40.42
Gene sequence:
>1002_bases ATGATTAAAGCATGGCTATTGCTTTTGGCTGCAGCGTACTCCCCCCAATTGATGGCAACACCTGAAGAGATAAAACCTTT AGTACTCTTTCAAGGAGAGGTTTCAGAAGGGACATTTCTGCATATGGTAGAGCAGGGGATCAATGAGTTTGAGGCGGTGT CTTCTATTCCTGTCGTTAAAAAGCGATTGAAGCGTGATAACAGTCTTTATCTTGAAGAGATTGAAAAAGGCGCAGTGGCA GGCTTTAGTCCAATCGTTGTGCAAGACTCTAATTCAATAGAGACCTTCGGCAATGTTGCGAAAGCGAATCCCGCAACCAA GTTTATTTCGTTAGATGTGGCATACGATGTTCCTAATATCTTAGGTCTCACCTTTAATCATGCAGAAGGCGCTTACGTGA TTGGCTTTATAGCGGGGTTAAAGACTAGAACCAATCATGTGGGTTTTATTGGAGCCATAGACATTCCAGTTTTAGAGAAC TTCCGTTGTGGTTATGAGCTTGGTTTAAAGAAGGCTAATAGCAATGCGCGTTTATCGACTCAGTATATTAATAACGGTGT ATTGTCTTGGGATGATTTAGAAAAGGCTAGAGCTTTGGCACTGCAGATGGTGAGTGAACAGGTCGACATTATTTTCCCTG TGGCGGGCTTTGCGAGTAAAGCGGTTATGGATACCATGAAAAACCTAGGCCCAGGTCACTTCAGTTTTGGTATCGATTTT AATCTTAATCATGACTATCCAAATACCTTACTTGCGTCTTTTGAAAAACGTTCTGATAAGGCTATTTTTGCCGCTTTAAT GCTCTTGAAAAATGGGATATGGAATAGCAACGAAAAACACTTTGGTATTAAGCAAGGAATTATTAATGTCGCTGTAAACC AAGATAATCCGAGCTTAAGCAAAAAGGATAAAGAGTTAATTAGCGATCTTATCATTCAGTTAAAGGGGAAGAACAACGCC ATTTCACGTGAAATCATAACTCAATGTGAGATAGGAAGATGA
Upstream 100 bases:
>100_bases TTCAAACTCTCTTTTATCCTTATAATCAATAACATTACCCTATAAACTAAGTATTGAATTTATTGGTCTTCTCTGGCCAA TAGAAGAGTTGACACTATTC
Downstream 100 bases:
>100_bases AAAAGCTCTCTTCTCATATCATCATCCTATACATCTTGCTTACCTTAGTTCCGATGTTGGTGATTGGTGGCTTTAATGTC ACAAAGAGTTTACTTACCGA
Product: basic membrane lipoprotein
Products: NA
Alternate protein names: Immunodominant antigen P39 [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MIKAWLLLLAAAYSPQLMATPEEIKPLVLFQGEVSEGTFLHMVEQGINEFEAVSSIPVVKKRLKRDNSLYLEEIEKGAVA GFSPIVVQDSNSIETFGNVAKANPATKFISLDVAYDVPNILGLTFNHAEGAYVIGFIAGLKTRTNHVGFIGAIDIPVLEN FRCGYELGLKKANSNARLSTQYINNGVLSWDDLEKARALALQMVSEQVDIIFPVAGFASKAVMDTMKNLGPGHFSFGIDF NLNHDYPNTLLASFEKRSDKAIFAALMLLKNGIWNSNEKHFGIKQGIINVAVNQDNPSLSKKDKELISDLIIQLKGKNNA ISREIITQCEIGR
Sequences:
>Translated_333_residues MIKAWLLLLAAAYSPQLMATPEEIKPLVLFQGEVSEGTFLHMVEQGINEFEAVSSIPVVKKRLKRDNSLYLEEIEKGAVA GFSPIVVQDSNSIETFGNVAKANPATKFISLDVAYDVPNILGLTFNHAEGAYVIGFIAGLKTRTNHVGFIGAIDIPVLEN FRCGYELGLKKANSNARLSTQYINNGVLSWDDLEKARALALQMVSEQVDIIFPVAGFASKAVMDTMKNLGPGHFSFGIDF NLNHDYPNTLLASFEKRSDKAIFAALMLLKNGIWNSNEKHFGIKQGIINVAVNQDNPSLSKKDKELISDLIIQLKGKNNA ISREIITQCEIGR >Mature_333_residues MIKAWLLLLAAAYSPQLMATPEEIKPLVLFQGEVSEGTFLHMVEQGINEFEAVSSIPVVKKRLKRDNSLYLEEIEKGAVA GFSPIVVQDSNSIETFGNVAKANPATKFISLDVAYDVPNILGLTFNHAEGAYVIGFIAGLKTRTNHVGFIGAIDIPVLEN FRCGYELGLKKANSNARLSTQYINNGVLSWDDLEKARALALQMVSEQVDIIFPVAGFASKAVMDTMKNLGPGHFSFGIDF NLNHDYPNTLLASFEKRSDKAIFAALMLLKNGIWNSNEKHFGIKQGIINVAVNQDNPSLSKKDKELISDLIIQLKGKNNA ISREIITQCEIGR
Specific function: Not known; immunogenic protein [H]
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 36616; Mature: 36616
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKAWLLLLAAAYSPQLMATPEEIKPLVLFQGEVSEGTFLHMVEQGINEFEAVSSIPVVK CHHHHHHHHHHHCCCCEECCHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHH KRLKRDNSLYLEEIEKGAVAGFSPIVVQDSNSIETFGNVAKANPATKFISLDVAYDVPNI HHHCCCCCHHHHHHHCCCCCCCCCEEEECCCCHHHHCCHHCCCCCCEEEEEEEEECCCHH LGLTFNHAEGAYVIGFIAGLKTRTNHVGFIGAIDIPVLENFRCGYELGLKKANSNARLST HEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCHHCCCCCCHHHCCEECCCCCEEEH QYINNGVLSWDDLEKARALALQMVSEQVDIIFPVAGFASKAVMDTMKNLGPGHFSFGIDF HHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEE NLNHDYPNTLLASFEKRSDKAIFAALMLLKNGIWNSNEKHFGIKQGIINVAVNQDNPSLS ECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCEEEEEEECCCCCCC KKDKELISDLIIQLKGKNNAISREIITQCEIGR HHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MIKAWLLLLAAAYSPQLMATPEEIKPLVLFQGEVSEGTFLHMVEQGINEFEAVSSIPVVK CHHHHHHHHHHHCCCCEECCHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHH KRLKRDNSLYLEEIEKGAVAGFSPIVVQDSNSIETFGNVAKANPATKFISLDVAYDVPNI HHHCCCCCHHHHHHHCCCCCCCCCEEEECCCCHHHHCCHHCCCCCCEEEEEEEEECCCHH LGLTFNHAEGAYVIGFIAGLKTRTNHVGFIGAIDIPVLENFRCGYELGLKKANSNARLST HEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCHHCCCCCCHHHCCEECCCCCEEEH QYINNGVLSWDDLEKARALALQMVSEQVDIIFPVAGFASKAVMDTMKNLGPGHFSFGIDF HHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEE NLNHDYPNTLLASFEKRSDKAIFAALMLLKNGIWNSNEKHFGIKQGIINVAVNQDNPSLS ECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCEEEEEEECCCCCCC KKDKELISDLIIQLKGKNNAISREIITQCEIGR HHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8050720; 8978084; 9403685; 7812434 [H]