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The map label for this gene is napC [H]

Identifier: 157962246

GI number: 157962246

Start: 2963294

End: 2963893

Strand: Reverse

Name: napC [H]

Synonym: Spea_2425

Alternate gene names: 157962246

Gene position: 2963893-2963294 (Counterclockwise)

Preceding gene: 157962247

Following gene: 157962245

Centisome position: 57.28

GC content: 46.0

Gene sequence:

>600_bases
ATGATCGCTAAATTACGATCTTTCCTTAAAAAGGTATGGACAGTGCTGAGAAAGCCAAGTGTTCATTACAGCTTAGGCTT
TTTAACGCTCGGTGGCTTCGTAGCTGGGGTGATTTTCTGGGGTGGCTTTAACACTGCGTTGACAGTATCTAACACTGAAG
CGTTTTGTATTAGCTGTCATGAGATGGAAAATAACGTTTACGAAGAACTTAAAACAACGATTCACTTCACTAACCGCAGT
GGTGTGCGAGCGACATGTCCCGATTGTCACGTACCTCATAACTGGACCGATAAGATTGCTCGTAAGATGCAAGCATCGAA
AGAAGTGTGGGGTAAGGTGTTCGGTACCATCAATACTCGCGAAAAGTTCGAAGAGAAGCGTCGTGAGCTTGCTGAACATG
AGTGGGCGCGTTTAAAAGCCAATGATTCGCTGGAGTGCCGTAACTGTCACAACTTCGATTACATGGACTTTACTCGCCAA
TCACCACGTGCAGCTAAGATGCACTCAACCTCTCTTGCCAGTGGTGAGAAGACCTGTATCGACTGCCACAAGGGTATTGC
CCATCACCTTCCTGATATGAAAGGTGTTGAAGGTTGGTGA

Upstream 100 bases:

>100_bases
TGCCACAACTAGACGCTAAAATTCTAGTGCCGAATGAGTTTGTGGATATGGACCAGCTAATGAAAGCCGATTCTAATAAG
AAAGCACACTAGGAGTAGTT

Downstream 100 bases:

>100_bases
TCTAATCTTGTCACAATAGCTTGAAACTAAAAAGCCAGCGCATATTGCGCTGGCTTTTGTATTTAAGGTGTCTTGTCCTG
AAATGTGTTTACACATTTAG

Product: NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MIAKLRSFLKKVWTVLRKPSVHYSLGFLTLGGFVAGVIFWGGFNTALTVSNTEAFCISCHEMENNVYEELKTTIHFTNRS
GVRATCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTREKFEEKRRELAEHEWARLKANDSLECRNCHNFDYMDFTRQ
SPRAAKMHSTSLASGEKTCIDCHKGIAHHLPDMKGVEGW

Sequences:

>Translated_199_residues
MIAKLRSFLKKVWTVLRKPSVHYSLGFLTLGGFVAGVIFWGGFNTALTVSNTEAFCISCHEMENNVYEELKTTIHFTNRS
GVRATCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTREKFEEKRRELAEHEWARLKANDSLECRNCHNFDYMDFTRQ
SPRAAKMHSTSLASGEKTCIDCHKGIAHHLPDMKGVEGW
>Mature_199_residues
MIAKLRSFLKKVWTVLRKPSVHYSLGFLTLGGFVAGVIFWGGFNTALTVSNTEAFCISCHEMENNVYEELKTTIHFTNRS
GVRATCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTREKFEEKRRELAEHEWARLKANDSLECRNCHNFDYMDFTRQ
SPRAAKMHSTSLASGEKTCIDCHKGIAHHLPDMKGVEGW

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=191, Percent_Identity=58.6387434554974, Blast_Score=245, Evalue=1e-66,
Organism=Escherichia coli, GI1787230, Length=186, Percent_Identity=46.7741935483871, Blast_Score=184, Evalue=4e-48,
Organism=Escherichia coli, GI1788181, Length=142, Percent_Identity=49.2957746478873, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 22779; Mature: 22779

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKLRSFLKKVWTVLRKPSVHYSLGFLTLGGFVAGVIFWGGFNTALTVSNTEAFCISCH
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEHH
EMENNVYEELKTTIHFTNRSGVRATCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTR
HHHHHHHHHHHHHHEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
EKFEEKRRELAEHEWARLKANDSLECRNCHNFDYMDFTRQSPRAAKMHSTSLASGEKTCI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCHHHH
DCHKGIAHHLPDMKGVEGW
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIAKLRSFLKKVWTVLRKPSVHYSLGFLTLGGFVAGVIFWGGFNTALTVSNTEAFCISCH
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEHH
EMENNVYEELKTTIHFTNRSGVRATCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTR
HHHHHHHHHHHHHHEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
EKFEEKRRELAEHEWARLKANDSLECRNCHNFDYMDFTRQSPRAAKMHSTSLASGEKTCI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCHHHH
DCHKGIAHHLPDMKGVEGW
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7639719 [H]