| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962205
Identifier: 157962205
GI number: 157962205
Start: 2907380
End: 2908291
Strand: Reverse
Name: 157962205
Synonym: Spea_2384
Alternate gene names: NA
Gene position: 2908291-2907380 (Counterclockwise)
Preceding gene: 157962207
Following gene: 157962204
Centisome position: 56.2
GC content: 41.67
Gene sequence:
>912_bases TTGAGATATGCAGGACGGCGGGAGGTAAGACTTAAGCAAAGGGTCTATGGTGAGGAGATCGTTACAGTAGACAAACTTGA TGAGCCTGACACCAAGTTAAATTTTGTTTGCCCTGATAGTGAGTTTAGGATCAACTCAAGCTTATTAACTGAGAAAAATG ACCAAAGACAATTCAAAGGTTTAACAATAACCCTTTGTGTATTATTACTGCACATCATAGCTATTGCTGCGATTGATGAT TTATGGATTAGATCGGCACCTTTAATAAAAAAAGTTTCTGCTCCAAAAATTCAATCCTATCTCTATCATGCTCCTCAAAA AGTGCCTGAATTAGAAGCATCGATAGTAAATCAAGTGACACTCGAGCAAGTTTCTACAGCCAATCCATCATCAATATCAG CACTTGTTAACGCACCAACGAGTGGGTTAAATGATCAAGCAAAGCCCCCAAAAGCTGCGTTATCTGAGCCCGCAACTTCT GACATATCTCTTCAAGCGTCTCTAAATACAACAGCTAAAAGTAAGAGTCGTACGTCAAGCGTGAACCGGTTTACTCAGTC TTATTTAGCAAAGCAAAGAGCCAGTCAACTCGACTCGCTGGTCATAGAGCGTGCTGCAAAATATACCCAGCAGCGCTCCC TTAGTGAGATGGACGGCGACATGCAGGAGCTAGTTTTTCCTGAGGTTGATACATATAGCAAGGTGGCCACAACTGACCAT GTACTCGACCCTAATCGCATCATTAGGAAGGGGGATACTTGTTATCGTATTGTCAAAATTGGTGATCAAATTAACCCTTA TGCTGAGACGATCGGTTTTCCATTTAATTGTGGAGGAGATAAGGTTAAAAAAGCGATTAACGATGCGATAGCCGCAAGAT TAAACAAGCGAATGGTCGGTAAACAGCGCTAA
Upstream 100 bases:
>100_bases AGTGAAAAAGCCAGCAGCTAAAAAATGTTGAACTAAGGTAAAAGGTTGTTGCTCTAGATTGATGCCATTATAGGAAGAGT GCTTAAAAGGGATTAAGTCA
Downstream 100 bases:
>100_bases ATATTAAGTGAAGAAAATGGCATGGATGGTCTGGATACTTATAAAAGAAGTCATAAAATAAATTATAAAAGAAGTGATAA AAATTCATAGTTGTGATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MRYAGRREVRLKQRVYGEEIVTVDKLDEPDTKLNFVCPDSEFRINSSLLTEKNDQRQFKGLTITLCVLLLHIIAIAAIDD LWIRSAPLIKKVSAPKIQSYLYHAPQKVPELEASIVNQVTLEQVSTANPSSISALVNAPTSGLNDQAKPPKAALSEPATS DISLQASLNTTAKSKSRTSSVNRFTQSYLAKQRASQLDSLVIERAAKYTQQRSLSEMDGDMQELVFPEVDTYSKVATTDH VLDPNRIIRKGDTCYRIVKIGDQINPYAETIGFPFNCGGDKVKKAINDAIAARLNKRMVGKQR
Sequences:
>Translated_303_residues MRYAGRREVRLKQRVYGEEIVTVDKLDEPDTKLNFVCPDSEFRINSSLLTEKNDQRQFKGLTITLCVLLLHIIAIAAIDD LWIRSAPLIKKVSAPKIQSYLYHAPQKVPELEASIVNQVTLEQVSTANPSSISALVNAPTSGLNDQAKPPKAALSEPATS DISLQASLNTTAKSKSRTSSVNRFTQSYLAKQRASQLDSLVIERAAKYTQQRSLSEMDGDMQELVFPEVDTYSKVATTDH VLDPNRIIRKGDTCYRIVKIGDQINPYAETIGFPFNCGGDKVKKAINDAIAARLNKRMVGKQR >Mature_303_residues MRYAGRREVRLKQRVYGEEIVTVDKLDEPDTKLNFVCPDSEFRINSSLLTEKNDQRQFKGLTITLCVLLLHIIAIAAIDD LWIRSAPLIKKVSAPKIQSYLYHAPQKVPELEASIVNQVTLEQVSTANPSSISALVNAPTSGLNDQAKPPKAALSEPATS DISLQASLNTTAKSKSRTSSVNRFTQSYLAKQRASQLDSLVIERAAKYTQQRSLSEMDGDMQELVFPEVDTYSKVATTDH VLDPNRIIRKGDTCYRIVKIGDQINPYAETIGFPFNCGGDKVKKAINDAIAARLNKRMVGKQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33682; Mature: 33682
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYAGRREVRLKQRVYGEEIVTVDKLDEPDTKLNFVCPDSEFRINSSLLTEKNDQRQFKG CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCEECHHHHCCCCHHHHHCC LTITLCVLLLHIIAIAAIDDLWIRSAPLIKKVSAPKIQSYLYHAPQKVPELEASIVNQVT HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCHHCHHHHHHHHHHHH LEQVSTANPSSISALVNAPTSGLNDQAKPPKAALSEPATSDISLQASLNTTAKSKSRTSS HHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHH VNRFTQSYLAKQRASQLDSLVIERAAKYTQQRSLSEMDGDMQELVFPEVDTYSKVATTDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHH VLDPNRIIRKGDTCYRIVKIGDQINPYAETIGFPFNCGGDKVKKAINDAIAARLNKRMVG CCCCHHHHHCCCCEEEEEHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC KQR CCC >Mature Secondary Structure MRYAGRREVRLKQRVYGEEIVTVDKLDEPDTKLNFVCPDSEFRINSSLLTEKNDQRQFKG CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCEECHHHHCCCCHHHHHCC LTITLCVLLLHIIAIAAIDDLWIRSAPLIKKVSAPKIQSYLYHAPQKVPELEASIVNQVT HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCHHCHHHHHHHHHHHH LEQVSTANPSSISALVNAPTSGLNDQAKPPKAALSEPATSDISLQASLNTTAKSKSRTSS HHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHH VNRFTQSYLAKQRASQLDSLVIERAAKYTQQRSLSEMDGDMQELVFPEVDTYSKVATTDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHH VLDPNRIIRKGDTCYRIVKIGDQINPYAETIGFPFNCGGDKVKKAINDAIAARLNKRMVG CCCCHHHHHCCCCEEEEEHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC KQR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA