| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is thiG [H]
Identifier: 157962200
GI number: 157962200
Start: 2901488
End: 2902252
Strand: Reverse
Name: thiG [H]
Synonym: Spea_2379
Alternate gene names: 157962200
Gene position: 2902252-2901488 (Counterclockwise)
Preceding gene: 157962201
Following gene: 157962199
Centisome position: 56.09
GC content: 51.24
Gene sequence:
>765_bases ATGTTAACGATTGCCGATCACCAATTTGAATCGCGACTATTTACTGGCACAGGAAAATTCGCAACAGCCCAAACCATGTT GGATGCGGTAGGGGCTTCTGAGTCTCAATTAGTGACTCTAGCGGTTAAAAGGCTAGATCTTAATACTGGCAGTGACAATA TTCTTAAGCCATTAATCGATAGCGGGGTAAAGCTACTGCCGAACACCGCTGGGGCGCGGAACGTTAAAGAAGCGCTGTTT GCCGCGCATCTTTCGCGAGAAATGCTGGGGACCAACTGGATAAAGCTTGAGATCCACCCGGATCCCAAATACCTGATGCC CGATCCCATTGAAACCTTGGAGGCGGCGCGTATTTTATGCGAACAGGGCTATGTGGTCTTGCCCTATGTTCATGCCGATC CTGTGCTGTGCCGCAGGCTCGAAGAGGTCGGCTGTGCAGCGGTAATGCCGCTTGGCAGTCCTATTGGCTCAAATCAGGGA CTGGCAAGCGAACCTTTCTTAAAGATCATTATCGAGCAGGCCAAGGTGCCTGTGATAGTCGATGCGGGAATTGGCGCACC TTCTCAGGCAACACATGCGATGGAGCTCGGCGCCGATGCCGTACTGGTTAATACCGCCATAGCTAGTAGTCGCGATCCGG TCACTATGGGGCGCTGTTTTGCTCAAGCTGTTAATACTGGACGACAAGCTTATATCGCAGGTTTAGGCGCCGTGAGTCAT CAAGCGCACAATACCAGTCCGTTAACGGGGTTCTTAAATGATTAG
Upstream 100 bases:
>100_bases GCGCTAAATGGTGAAGTCTTGCCTCGTGTTCGCTGGCAGACAGTGTCTTGTCTGGCGGATGATAAGCTTGAGATTTTTTC AGTAGTTGCGGGAGGCTAAA
Downstream 100 bases:
>100_bases CACTTATTTTGTTGTTAAGGAGTGCTTATGAGCTTTGTTGATGTGTTTAAAAAGCTGTCTCGTTCAGAGCTTAAACTCAG ATTGTATTCAAGCACAGCTG
Product: thiazole biosynthesis family protein
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MLTIADHQFESRLFTGTGKFATAQTMLDAVGASESQLVTLAVKRLDLNTGSDNILKPLIDSGVKLLPNTAGARNVKEALF AAHLSREMLGTNWIKLEIHPDPKYLMPDPIETLEAARILCEQGYVVLPYVHADPVLCRRLEEVGCAAVMPLGSPIGSNQG LASEPFLKIIIEQAKVPVIVDAGIGAPSQATHAMELGADAVLVNTAIASSRDPVTMGRCFAQAVNTGRQAYIAGLGAVSH QAHNTSPLTGFLND
Sequences:
>Translated_254_residues MLTIADHQFESRLFTGTGKFATAQTMLDAVGASESQLVTLAVKRLDLNTGSDNILKPLIDSGVKLLPNTAGARNVKEALF AAHLSREMLGTNWIKLEIHPDPKYLMPDPIETLEAARILCEQGYVVLPYVHADPVLCRRLEEVGCAAVMPLGSPIGSNQG LASEPFLKIIIEQAKVPVIVDAGIGAPSQATHAMELGADAVLVNTAIASSRDPVTMGRCFAQAVNTGRQAYIAGLGAVSH QAHNTSPLTGFLND >Mature_254_residues MLTIADHQFESRLFTGTGKFATAQTMLDAVGASESQLVTLAVKRLDLNTGSDNILKPLIDSGVKLLPNTAGARNVKEALF AAHLSREMLGTNWIKLEIHPDPKYLMPDPIETLEAARILCEQGYVVLPYVHADPVLCRRLEEVGCAAVMPLGSPIGSNQG LASEPFLKIIIEQAKVPVIVDAGIGAPSQATHAMELGADAVLVNTAIASSRDPVTMGRCFAQAVNTGRQAYIAGLGAVSH QAHNTSPLTGFLND
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=253, Percent_Identity=66.403162055336, Blast_Score=344, Evalue=4e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 26947; Mature: 26947
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIADHQFESRLFTGTGKFATAQTMLDAVGASESQLVTLAVKRLDLNTGSDNILKPLID CCEECCCHHHCEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCHHHHHHHH SGVKLLPNTAGARNVKEALFAAHLSREMLGTNWIKLEIHPDPKYLMPDPIETLEAARILC CCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH EQGYVVLPYVHADPVLCRRLEEVGCAAVMPLGSPIGSNQGLASEPFLKIIIEQAKVPVIV HCCCEEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEE DAGIGAPSQATHAMELGADAVLVNTAIASSRDPVTMGRCFAQAVNTGRQAYIAGLGAVSH ECCCCCCCHHHHHHHHCCCEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHH QAHNTSPLTGFLND CCCCCCCCEECCCC >Mature Secondary Structure MLTIADHQFESRLFTGTGKFATAQTMLDAVGASESQLVTLAVKRLDLNTGSDNILKPLID CCEECCCHHHCEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCHHHHHHHH SGVKLLPNTAGARNVKEALFAAHLSREMLGTNWIKLEIHPDPKYLMPDPIETLEAARILC CCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH EQGYVVLPYVHADPVLCRRLEEVGCAAVMPLGSPIGSNQGLASEPFLKIIIEQAKVPVIV HCCCEEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEE DAGIGAPSQATHAMELGADAVLVNTAIASSRDPVTMGRCFAQAVNTGRQAYIAGLGAVSH ECCCCCCCHHHHHHHHCCCEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHH QAHNTSPLTGFLND CCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA