Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962201

Identifier: 157962201

GI number: 157962201

Start: 2902254

End: 2902487

Strand: Reverse

Name: 157962201

Synonym: Spea_2380

Alternate gene names: NA

Gene position: 2902487-2902254 (Counterclockwise)

Preceding gene: 157962202

Following gene: 157962200

Centisome position: 56.09

GC content: 44.02

Gene sequence:

>234_bases
ATGTATAAAGGTAATGACAGCATTGCTATCAGTATCAATGATGAGAGCAAGCAAGTTGCGATTAACTCAAGCGTGCAAAG
TGTGATTGAAATGTATGCCGAGGTGAGAGGCGTGGATATTCAAGGTATTGCTATAGCGCTAAATGGTGAAGTCTTGCCTC
GTGTTCGCTGGCAGACAGTGTCTTGTCTGGCGGATGATAAGCTTGAGATTTTTTCAGTAGTTGCGGGAGGCTAA

Upstream 100 bases:

>100_bases
CGTTTACCGCGTAGCCCCGAGTGCGTGATCTGTGGGGACGTTCAAGGTCTATCTGGTGCCGAAAAAAACTGCGGCAAGTT
ACCGTCTACGGAGAAAGAAT

Downstream 100 bases:

>100_bases
AATGTTAACGATTGCCGATCACCAATTTGAATCGCGACTATTTACTGGCACAGGAAAATTCGCAACAGCCCAAACCATGT
TGGATGCGGTAGGGGCTTCT

Product: thiamine biosynthesis protein ThiS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MYKGNDSIAISINDESKQVAINSSVQSVIEMYAEVRGVDIQGIAIALNGEVLPRVRWQTVSCLADDKLEIFSVVAGG

Sequences:

>Translated_77_residues
MYKGNDSIAISINDESKQVAINSSVQSVIEMYAEVRGVDIQGIAIALNGEVLPRVRWQTVSCLADDKLEIFSVVAGG
>Mature_77_residues
MYKGNDSIAISINDESKQVAINSSVQSVIEMYAEVRGVDIQGIAIALNGEVLPRVRWQTVSCLADDKLEIFSVVAGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8284; Mature: 8284

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKGNDSIAISINDESKQVAINSSVQSVIEMYAEVRGVDIQGIAIALNGEVLPRVRWQTV
CCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEE
SCLADDKLEIFSVVAGG
EECCCCCEEEEEEEECC
>Mature Secondary Structure
MYKGNDSIAISINDESKQVAINSSVQSVIEMYAEVRGVDIQGIAIALNGEVLPRVRWQTV
CCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEE
SCLADDKLEIFSVVAGG
EECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA