| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962167
Identifier: 157962167
GI number: 157962167
Start: 2858049
End: 2858600
Strand: Reverse
Name: 157962167
Synonym: Spea_2346
Alternate gene names: NA
Gene position: 2858600-2858049 (Counterclockwise)
Preceding gene: 157962169
Following gene: 157962166
Centisome position: 55.24
GC content: 43.84
Gene sequence:
>552_bases ATGACTCATCGGGTCGATAAGGTTTTAACAGTTTGTTTTATTGGTTTATTTTTATTCACAATGAGTGTTATACAGTTAGA AAGTACATTAGTTAACGAATCCCAGTTGGGATCGAGACTCAATCACGCAGTCGGTTCAAACCGACGAGGGGAATTTGGGT TACTGCTTTCTATGCTTTCGGAAGATGCGCGTGATATGGCGCAATTTCAGACTCCAGGGCATCTTTGCGATGACCTGCGC ACAAAGTTTGAACTTCCCGCTCCTCAGAAGCTACTCGGGCTACTCGATAGTGACCATAGCGTGACAGATAACAGTAAGAC GTACCAATTAAATGGGCCTACGGCTTTTCGTTTGGCTAACGCATTAAACGAAGAAGCCATAGTGATCCGTCACAATGAGC CATTAGGAATGCAAGAGGTGTTAGCTAACTGTGCACTCTCTACTCGCCAACGCTATCGTCAGGTGTCGACAAAAGCAAAG GTGGAATTGATGCATTTTGGCGATCAATTACTCATGCAACGTAAAATGAGCGAATTAATAGCTCAAGCTTGA
Upstream 100 bases:
>100_bases TTGCTCAATGTGATTATTAATTAGCTAGTTACTAAAACAATTGCTATGAGTTTAGAAACTACTGGCCAATGTAATTGAAT CCGAAATAAAGCCTAAAGTA
Downstream 100 bases:
>100_bases TGATGATCCTGCTCTATTTTGATTTGCTGATATATAATCAGATATTCAAATGATCTTAATAGAGACAAGTTAAAGATGAA AAATATTCAAAAGGCACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTHRVDKVLTVCFIGLFLFTMSVIQLESTLVNESQLGSRLNHAVGSNRRGEFGLLLSMLSEDARDMAQFQTPGHLCDDLR TKFELPAPQKLLGLLDSDHSVTDNSKTYQLNGPTAFRLANALNEEAIVIRHNEPLGMQEVLANCALSTRQRYRQVSTKAK VELMHFGDQLLMQRKMSELIAQA
Sequences:
>Translated_183_residues MTHRVDKVLTVCFIGLFLFTMSVIQLESTLVNESQLGSRLNHAVGSNRRGEFGLLLSMLSEDARDMAQFQTPGHLCDDLR TKFELPAPQKLLGLLDSDHSVTDNSKTYQLNGPTAFRLANALNEEAIVIRHNEPLGMQEVLANCALSTRQRYRQVSTKAK VELMHFGDQLLMQRKMSELIAQA >Mature_182_residues THRVDKVLTVCFIGLFLFTMSVIQLESTLVNESQLGSRLNHAVGSNRRGEFGLLLSMLSEDARDMAQFQTPGHLCDDLRT KFELPAPQKLLGLLDSDHSVTDNSKTYQLNGPTAFRLANALNEEAIVIRHNEPLGMQEVLANCALSTRQRYRQVSTKAKV ELMHFGDQLLMQRKMSELIAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20545; Mature: 20414
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRVDKVLTVCFIGLFLFTMSVIQLESTLVNESQLGSRLNHAVGSNRRGEFGLLLSMLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHH EDARDMAQFQTPGHLCDDLRTKFELPAPQKLLGLLDSDHSVTDNSKTYQLNGPTAFRLAN HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHH ALNEEAIVIRHNEPLGMQEVLANCALSTRQRYRQVSTKAKVELMHFGDQLLMQRKMSELI HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQA HCC >Mature Secondary Structure THRVDKVLTVCFIGLFLFTMSVIQLESTLVNESQLGSRLNHAVGSNRRGEFGLLLSMLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHH EDARDMAQFQTPGHLCDDLRTKFELPAPQKLLGLLDSDHSVTDNSKTYQLNGPTAFRLAN HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHH ALNEEAIVIRHNEPLGMQEVLANCALSTRQRYRQVSTKAKVELMHFGDQLLMQRKMSELI HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA