| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157962070
Identifier: 157962070
GI number: 157962070
Start: 2727127
End: 2727570
Strand: Reverse
Name: 157962070
Synonym: Spea_2249
Alternate gene names: NA
Gene position: 2727570-2727127 (Counterclockwise)
Preceding gene: 157962072
Following gene: 157962068
Centisome position: 52.71
GC content: 44.14
Gene sequence:
>444_bases ATGTCCGGAAATGGCACAGAATTACTGCCTTTAGCAACTAAATCTCTACTACGTTCTTGCTCTGATAGTGATAGAATCTC CGCATCAGAATTACCGAGAAACTCTATGTATATCCATCATGTTAACGGCATCGACTGGCTGGTGATTACAGCTTTTGAAG AACTGAAAACTTTATTTATCGAAGAAGCCGGTGGGATCCCATTTTGCTTCTCTACCGCCAGCGAATTGAACCTGATTGCT CAAGCCAAGCGCACTTATGGATATTTGCCTACCCTCAGCGGCGTAATCACCGATACCGGCATTTATCAAAGTAAGGATAA CGAAGAAGATTTGCACCCACAGCTTGCCTGCCTAGTTGAGGGGCGTGGTCGGGTATTTATCTATCACGGCGGCTTTGTGG CTTTTGTGGATGACGAGCAAACCTTTATTACTCAAATTGAATAA
Upstream 100 bases:
>100_bases CGGGCTATCCCATAGCAACGATACCAAAGATAATGTAACCAACCTTCATTCGAAGGCTAACTCACTTTGGGGCCAAAGTG AGTTTCAAGTTGCCTAGTGA
Downstream 100 bases:
>100_bases CGATAACTCTTGTGATGATTTTTTAATGGCTAAAGTTGATAAACAGGCAAATGTAGTTCCTGCACACAGTCATGAGTTTC ATTATGGAACCTTGAGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSGNGTELLPLATKSLLRSCSDSDRISASELPRNSMYIHHVNGIDWLVITAFEELKTLFIEEAGGIPFCFSTASELNLIA QAKRTYGYLPTLSGVITDTGIYQSKDNEEDLHPQLACLVEGRGRVFIYHGGFVAFVDDEQTFITQIE
Sequences:
>Translated_147_residues MSGNGTELLPLATKSLLRSCSDSDRISASELPRNSMYIHHVNGIDWLVITAFEELKTLFIEEAGGIPFCFSTASELNLIA QAKRTYGYLPTLSGVITDTGIYQSKDNEEDLHPQLACLVEGRGRVFIYHGGFVAFVDDEQTFITQIE >Mature_146_residues SGNGTELLPLATKSLLRSCSDSDRISASELPRNSMYIHHVNGIDWLVITAFEELKTLFIEEAGGIPFCFSTASELNLIAQ AKRTYGYLPTLSGVITDTGIYQSKDNEEDLHPQLACLVEGRGRVFIYHGGFVAFVDDEQTFITQIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16279; Mature: 16147
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNGTELLPLATKSLLRSCSDSDRISASELPRNSMYIHHVNGIDWLVITAFEELKTLFI CCCCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEHHHHHHHHH EEAGGIPFCFSTASELNLIAQAKRTYGYLPTLSGVITDTGIYQSKDNEEDLHPQLACLVE HCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEE GRGRVFIYHGGFVAFVDDEQTFITQIE CCCEEEEEECCEEEEEECCCEEEEECC >Mature Secondary Structure SGNGTELLPLATKSLLRSCSDSDRISASELPRNSMYIHHVNGIDWLVITAFEELKTLFI CCCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEHHHHHHHHH EEAGGIPFCFSTASELNLIAQAKRTYGYLPTLSGVITDTGIYQSKDNEEDLHPQLACLVE HCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEE GRGRVFIYHGGFVAFVDDEQTFITQIE CCCEEEEEECCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA