| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is nadA [H]
Identifier: 157962064
GI number: 157962064
Start: 2720017
End: 2721084
Strand: Reverse
Name: nadA [H]
Synonym: Spea_2243
Alternate gene names: 157962064
Gene position: 2721084-2720017 (Counterclockwise)
Preceding gene: 157962065
Following gene: 157962063
Centisome position: 52.59
GC content: 45.41
Gene sequence:
>1068_bases ATGAGCGCATTCGCCCCAATTATCGAAAATATTGATTACCCTTTTCCACCAAAGCCAGCTCCTTTATCTGAGCGAGAAAA AGCCGAATCAAAAGCAAAAATTAAGCAGCTTTTAAAAGATAAAGATGCCGTGCTTGTGGCGCACTACTATACCGACCCAG AGATCCAAGCCTTAGCCGAAGAAACGGGAGGCTGTGTTTCTGACTCGTTAGAGATGGCGCGTTTTGGTCGTGATCACCCA GCAAAGACGTTAATCGTCGCTGGCGTTAAATTTATGGGCGAAACCGCAAAAATTTTAAGTCCTGAGAAGACTATCTTGAT GCCGACGCTCGAAGCGACCTGTTCTTTAGATATAGGTTGCCCAATCGAGACATTCAGTGAGTTCTGCGATGCGCACCCAG ATCACACGGTAGTCGTATATGCCAATACTTCAGCGGCGGTAAAAGCCAGAGCCGACTGGGTGGTTACATCGAGCATTGCC CTTGAAATCGTTGAGCACCTAGACAGTGAAGATAAAAAGATTATCTGGGGACCAGATCGTCATTTAGGCAGCTATATCGC CAAGCAAACCGGTGCCGAGATGTTGATGTGGCAAGGCGAATGTATCGTTCATGATGAATTCCAAGCCAAAGCTTTACGTG AGCTGAAAAAGATCCATCCAAATGCCGCTGTACTGGTACATCCAGAATCTCCTGCAAGTGTGGTAGAGCTAGGCGATGCT GTGGGCTCAACAAGCCAGCTGATTAAAGCGGCGCAAACCATGGATAATGATACTTTTATCGTGGCTACCGACAAAGGGAT CTTCTATAAGATGCAGCAAGCTGCACCTAATAAAAATTTAATTGCCGCACCAACGGGTGGTAATGGAGCGACTTGTAAGA GTTGTGCACATTGCCCATGGATGGCGATGAATGGCTTAAAAGCTATCGAGAGTGCGTTAGAAAACGTAGATGCGAGTCAT CATGAGATATTTGTCGATGATAGTTTACGCTTAGATGCGTTAAAACCATTAGACAGAATGCTGAATTTTGCTCAGACACT GAATATGAAAGTAAAAGGCAATGCGTAA
Upstream 100 bases:
>100_bases AAATAGCGCCTTTTTTATTGGCAGCGTCGCTATAAGAGTTTTAAATTTGTGAAGTATTCCGTATAATTCCGCTAATCTGT TATTGCCCGTTGGTTGTACT
Downstream 100 bases:
>100_bases ATAGCTTAACTCTTATCATAGCCACCTACATTTAGTTGGCGCATTGAGTGACTATTATAGTTTAAAGAAAAAAAGCCCGT TGATACGGGCTTTTTTTTCA
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSAFAPIIENIDYPFPPKPAPLSEREKAESKAKIKQLLKDKDAVLVAHYYTDPEIQALAEETGGCVSDSLEMARFGRDHP AKTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDIGCPIETFSEFCDAHPDHTVVVYANTSAAVKARADWVVTSSIA LEIVEHLDSEDKKIIWGPDRHLGSYIAKQTGAEMLMWQGECIVHDEFQAKALRELKKIHPNAAVLVHPESPASVVELGDA VGSTSQLIKAAQTMDNDTFIVATDKGIFYKMQQAAPNKNLIAAPTGGNGATCKSCAHCPWMAMNGLKAIESALENVDASH HEIFVDDSLRLDALKPLDRMLNFAQTLNMKVKGNA
Sequences:
>Translated_355_residues MSAFAPIIENIDYPFPPKPAPLSEREKAESKAKIKQLLKDKDAVLVAHYYTDPEIQALAEETGGCVSDSLEMARFGRDHP AKTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDIGCPIETFSEFCDAHPDHTVVVYANTSAAVKARADWVVTSSIA LEIVEHLDSEDKKIIWGPDRHLGSYIAKQTGAEMLMWQGECIVHDEFQAKALRELKKIHPNAAVLVHPESPASVVELGDA VGSTSQLIKAAQTMDNDTFIVATDKGIFYKMQQAAPNKNLIAAPTGGNGATCKSCAHCPWMAMNGLKAIESALENVDASH HEIFVDDSLRLDALKPLDRMLNFAQTLNMKVKGNA >Mature_354_residues SAFAPIIENIDYPFPPKPAPLSEREKAESKAKIKQLLKDKDAVLVAHYYTDPEIQALAEETGGCVSDSLEMARFGRDHPA KTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDIGCPIETFSEFCDAHPDHTVVVYANTSAAVKARADWVVTSSIAL EIVEHLDSEDKKIIWGPDRHLGSYIAKQTGAEMLMWQGECIVHDEFQAKALRELKKIHPNAAVLVHPESPASVVELGDAV GSTSQLIKAAQTMDNDTFIVATDKGIFYKMQQAAPNKNLIAAPTGGNGATCKSCAHCPWMAMNGLKAIESALENVDASHH EIFVDDSLRLDALKPLDRMLNFAQTLNMKVKGNA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=336, Percent_Identity=71.1309523809524, Blast_Score=516, Evalue=1e-147,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 38625; Mature: 38493
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFAPIIENIDYPFPPKPAPLSEREKAESKAKIKQLLKDKDAVLVAHYYTDPEIQALAE CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHH ETGGCVSDSLEMARFGRDHPAKTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDIGC HHCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCHHHHCCCCCEEEEEECCCEEEEECCC PIETFSEFCDAHPDHTVVVYANTSAAVKARADWVVTSSIALEIVEHLDSEDKKIIWGPDR CHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEHHHHHHHHHHHCCCCCCEEEECCCH HLGSYIAKQTGAEMLMWQGECIVHDEFQAKALRELKKIHPNAAVLVHPESPASVVELGDA HHHHHHHHHCCCCEEEECCCEEEECHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH VGSTSQLIKAAQTMDNDTFIVATDKGIFYKMQQAAPNKNLIAAPTGGNGATCKSCAHCPW CCCHHHHHHHHHHCCCCEEEEEECCCEEEEEHHCCCCCCEEEECCCCCCCCCHHHCCCCH MAMNGLKAIESALENVDASHHEIFVDDSLRLDALKPLDRMLNFAQTLNMKVKGNA HHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCEEEECCC >Mature Secondary Structure SAFAPIIENIDYPFPPKPAPLSEREKAESKAKIKQLLKDKDAVLVAHYYTDPEIQALAE CCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHH ETGGCVSDSLEMARFGRDHPAKTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDIGC HHCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCHHHHCCCCCEEEEEECCCEEEEECCC PIETFSEFCDAHPDHTVVVYANTSAAVKARADWVVTSSIALEIVEHLDSEDKKIIWGPDR CHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEHHHHHHHHHHHCCCCCCEEEECCCH HLGSYIAKQTGAEMLMWQGECIVHDEFQAKALRELKKIHPNAAVLVHPESPASVVELGDA HHHHHHHHHCCCCEEEECCCEEEECHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH VGSTSQLIKAAQTMDNDTFIVATDKGIFYKMQQAAPNKNLIAAPTGGNGATCKSCAHCPW CCCHHHHHHHHHHCCCCEEEEEECCCEEEEEHHCCCCCCEEEECCCCCCCCCHHHCCCCH MAMNGLKAIESALENVDASHHEIFVDDSLRLDALKPLDRMLNFAQTLNMKVKGNA HHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]