| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yecA [C]
Identifier: 157962000
GI number: 157962000
Start: 2639206
End: 2639541
Strand: Reverse
Name: yecA [C]
Synonym: Spea_2179
Alternate gene names: 157962000
Gene position: 2639541-2639206 (Counterclockwise)
Preceding gene: 157962002
Following gene: 157961999
Centisome position: 51.01
GC content: 41.07
Gene sequence:
>336_bases ATGTCAGACAAATTCTTTTTTAAAGGGCGTAAAACCCCAAAGCCTAAGCACGAAAGCTATGGTTACAACACTAAACGTGA AATAAAAGTGGGAACCGAAGAAAACCCACTTCAACTACTGGTTCAAACCGCCGAGCGTGAAGCAGAAGTATTACAACTGC TTACTGATAATGAGCTGGTGGGCTTGATTACTGTCGATCCAAACCAAGAGGAAAATATCCTTCTTTTGACTGGACTGCTT AATAAGCCACAAACTACCCGTTTTGAAAAGTCACCGAATCGTAACGATCCATGTGTATGCGGTAGTGGTAAGAAATATAA GAAATGCTGCGGTTAA
Upstream 100 bases:
>100_bases ACTAAAAAGGCCACGATTATCAGACTTAGATACCACTGAAGCCTTTTTTATAGTATAAGCTTGCGTAAATTTATCTTTAT TTAGATTGAGCGCCATAGCG
Downstream 100 bases:
>100_bases AATCGTAGAATTTAAAGCAGTGCATTAGCACTGCTTTTTCTATTCGCTCAATCCTGCTTTACTCCCCTTCACTCTGTCCT TCCTCTGCTGCTATATCATC
Product: SecC motif-containing protein
Products: NA
Alternate protein names: SEC-C Motif Domain-Containing Protein; SEC-C Motif Domain Protein; Preprotein Translocase Subunit-Like Protein; ATPase
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSDKFFFKGRKTPKPKHESYGYNTKREIKVGTEENPLQLLVQTAEREAEVLQLLTDNELVGLITVDPNQEENILLLTGLL NKPQTTRFEKSPNRNDPCVCGSGKKYKKCCG
Sequences:
>Translated_111_residues MSDKFFFKGRKTPKPKHESYGYNTKREIKVGTEENPLQLLVQTAEREAEVLQLLTDNELVGLITVDPNQEENILLLTGLL NKPQTTRFEKSPNRNDPCVCGSGKKYKKCCG >Mature_110_residues SDKFFFKGRKTPKPKHESYGYNTKREIKVGTEENPLQLLVQTAEREAEVLQLLTDNELVGLITVDPNQEENILLLTGLLN KPQTTRFEKSPNRNDPCVCGSGKKYKKCCG
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12601; Mature: 12469
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKFFFKGRKTPKPKHESYGYNTKREIKVGTEENPLQLLVQTAEREAEVLQLLTDNELV CCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEE GLITVDPNQEENILLLTGLLNKPQTTRFEKSPNRNDPCVCGSGKKYKKCCG EEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHCC >Mature Secondary Structure SDKFFFKGRKTPKPKHESYGYNTKREIKVGTEENPLQLLVQTAEREAEVLQLLTDNELV CCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEE GLITVDPNQEENILLLTGLLNKPQTTRFEKSPNRNDPCVCGSGKKYKKCCG EEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA