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The map label for this gene is ycbZ [H]

Identifier: 157962002

GI number: 157962002

Start: 2640913

End: 2643300

Strand: Reverse

Name: ycbZ [H]

Synonym: Spea_2181

Alternate gene names: 157962002

Gene position: 2643300-2640913 (Counterclockwise)

Preceding gene: 157962003

Following gene: 157962000

Centisome position: 51.08

GC content: 45.94

Gene sequence:

>2388_bases
ATGCCAATAAAACCTCTCAGCAGTGCCAAGCTTTACCGCGCGTCGACGCTAAAAAAGCTCTCTTCAGACTGCAAGTCGAC
TAAACACCTCGAACCCTTAGACGAAATCGTTGGTCAGGCCCGCGCGCAACAAGCGGTAGAATTTGCCCTTTCTATGAAAG
AGAAAGGCTATAACATTTACGCGCTTGGCCGTAACGGCTTAGGCAAGCGTACTATGGTTTTACGCCACCTTAATCGTCAA
GCGCCTAATTCGAACGGCCGTACACTATTCGATTGGTGCTATGTAGTTAACTTCGATGATTCCCGCAGCCCCAAGGTACT
AAAACTTCCCGCAGGCATGGGGCTTAGCTTTAAAAAAGACATAGAAAAACTGATGTCGAAACTGCTTAAGGCATTGCCTT
TAGCGTTCGATAATGAGATGTACTACAACCGAGCCGACAGATTAAAAAGCCAACTGACTTCGAGACAGGAAGAAGCATTA
CTGGTGCTAACCGAAGAAGCTAAGCGTAATAGTGTTGGCCTATCTATCTCTGCCCAAGGTAATTACGAGCTTGTTGCATT
AAATGGTGAGGAACCTCATACAGAAGAAAGCTATGTGGCACTCTCTGCGCAAGAGCAAGAAAGGATGCAGAATGCAATTT
CAGCTCTTGAGGCTCAGCTTCGTGGCATCGTTAGGCAGATCACCGTGTGGGAGGAAGAGTACTCTGAAAAGCAGCAAAAA
CACGATGAACAAGTCGCTGAAGAAGTCCTTACCCATGCACTAGCCAGTCTTAAACAGCAATATAAAGAACAGACTAATGT
AAAATCCTACATAAAGGCGATGCATAAAGACATCCTCGACAATCTGGACATTTTCTTGGAGGAAAGCGAAGAGCAAGCCG
CCCTCGCCTATGCTTCAATGAGTAAGAAGATGCCAAGGCGTTACCAGATCAATGTGTTGGTGTCACAGGAGTCTCAATTA
CAACCTATCATCGTTGAGGAGACTCCGAACTATCACACCATCTTCGGCTATGTCGAAAATGCCACCTATAAAGGCACGGT
TTTTACCGATTTCTCTCTCATTCGCCCAGGTAGTCTACATAAGGCAAATGGCGGCGTACTGATGATAGATGCGGTTAAAG
TACTTGAGCATCCGTATGTATGGGACGGCTTAAAGCGGGCTCTGAGATCACGCAAGCTGAGTTTAACTTCTCTCGAGCGT
GAAGTGACCTTGTCTGGCACCATCTCATTGGATCCTGAGGCGATTCCATTAGACGTGAAAATCATTTTATTCGGTGATTT
TGCTACCTACAAGCTATTGCAGCAGTATGACGCCGAGTTTACCGAGTTGTTTCGCGTAACTGCCGACTTTGAAGATAGAA
TGCCGCGTACCGATGTGTCTGAGGGGCATTATGCCCAGTTCATCTCCAGTATTGTACACAGCAACCAGATCTTACACTGC
GATAGAAAAGCAATCGCTCGAGTCATCGAGTTTAGCTCGCGTCAAGCCGATGATCAGAATATGCTTTCACTGCATTCAGT
CGATATCGCCAATCTATTACGTGAGGCAAACTATTGCGCCCGTGCAGCGAATGCCAACATGATCCGCGTTAGCCATGTGG
AACAGGCTCTATTTAATAAAGAAAAACGCATCTGCCGCGCAAAAGATGAATTTATGCAAAGCTTTATCAATGGCCAAACC
TTAATCGATACTCAAGGCGAAACGGTTGGTCAAGTGAACGGTCTATCTGTGATGTCGACAACCGATTACCAATTTGGTGC
TCCTAGCCGAATTACCGCCACCAGCTCATTTGGTGAAGGTAAGGTATTCGATATCGAGCGCAATGTTGAACTCAGTGGCA
GTATCCACTCAAAAGGCGTAATGATTTTAACCGCTTATATTGCAGCTATCTTAGGTAAGACTGATAAGATCCCACTATCG
ACTCACCTCACCTTTGAACAATCCTATGGTGGAGTCGATGGTGACAGTGCAACAATGGCAGAGTTATGCGCCATGTTGTC
ATCTTTTTCGGGTAAAGGGATCCGTCAAGATATCGCGATTACCGGCTCGATGAACCAGTTTGGTGAAGCGCAGCCCATTG
GGGGCGTCAATGAGAAAATTGAAGGCTTCTTTGATGTGTGTAAGATTAAGGGGCGTAGAGATACCCAAGGGGTCATTATT
CCGCAGTCGAATGTCCACAATTTAATGTTACGTCGAGATATTGTCGAAGCGGTTGAGAAAGGCAAATTCCATATTTGGGC
CATCAACCATGTTAACCAAGCCATTGAATTGCTCACGGGTTGCAAAGTCGGCACCTTGAATCAACAAGGCGACTACCCTA
AAAATAGTATTTTAGGCTTAGCCCAAGCGAGACTTAACGGCTTACGTCACAGAGACACCAAAGACTAG

Upstream 100 bases:

>100_bases
TAATAGGCTAATATCTAGCCGATCCGTAAATAATTGCAGAAATCTACTATCTAACTGTATAGAGTAAAATTATTGACCGT
CATTATTAAGAGGACGCATT

Downstream 100 bases:

>100_bases
CTTTCATTAGTTAAGAGCCAACAAAAAGGCCGAACATCTGTTCGGCCTTTTTTATGTCTGAATCTTGTTCAGGAATTGCT
TAATTAAGCGAAAGCATCCT

Product: putative ATP-dependent protease La-likeprotein

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 795; Mature: 794

Protein sequence:

>795_residues
MPIKPLSSAKLYRASTLKKLSSDCKSTKHLEPLDEIVGQARAQQAVEFALSMKEKGYNIYALGRNGLGKRTMVLRHLNRQ
APNSNGRTLFDWCYVVNFDDSRSPKVLKLPAGMGLSFKKDIEKLMSKLLKALPLAFDNEMYYNRADRLKSQLTSRQEEAL
LVLTEEAKRNSVGLSISAQGNYELVALNGEEPHTEESYVALSAQEQERMQNAISALEAQLRGIVRQITVWEEEYSEKQQK
HDEQVAEEVLTHALASLKQQYKEQTNVKSYIKAMHKDILDNLDIFLEESEEQAALAYASMSKKMPRRYQINVLVSQESQL
QPIIVEETPNYHTIFGYVENATYKGTVFTDFSLIRPGSLHKANGGVLMIDAVKVLEHPYVWDGLKRALRSRKLSLTSLER
EVTLSGTISLDPEAIPLDVKIILFGDFATYKLLQQYDAEFTELFRVTADFEDRMPRTDVSEGHYAQFISSIVHSNQILHC
DRKAIARVIEFSSRQADDQNMLSLHSVDIANLLREANYCARAANANMIRVSHVEQALFNKEKRICRAKDEFMQSFINGQT
LIDTQGETVGQVNGLSVMSTTDYQFGAPSRITATSSFGEGKVFDIERNVELSGSIHSKGVMILTAYIAAILGKTDKIPLS
THLTFEQSYGGVDGDSATMAELCAMLSSFSGKGIRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRRDTQGVII
PQSNVHNLMLRRDIVEAVEKGKFHIWAINHVNQAIELLTGCKVGTLNQQGDYPKNSILGLAQARLNGLRHRDTKD

Sequences:

>Translated_795_residues
MPIKPLSSAKLYRASTLKKLSSDCKSTKHLEPLDEIVGQARAQQAVEFALSMKEKGYNIYALGRNGLGKRTMVLRHLNRQ
APNSNGRTLFDWCYVVNFDDSRSPKVLKLPAGMGLSFKKDIEKLMSKLLKALPLAFDNEMYYNRADRLKSQLTSRQEEAL
LVLTEEAKRNSVGLSISAQGNYELVALNGEEPHTEESYVALSAQEQERMQNAISALEAQLRGIVRQITVWEEEYSEKQQK
HDEQVAEEVLTHALASLKQQYKEQTNVKSYIKAMHKDILDNLDIFLEESEEQAALAYASMSKKMPRRYQINVLVSQESQL
QPIIVEETPNYHTIFGYVENATYKGTVFTDFSLIRPGSLHKANGGVLMIDAVKVLEHPYVWDGLKRALRSRKLSLTSLER
EVTLSGTISLDPEAIPLDVKIILFGDFATYKLLQQYDAEFTELFRVTADFEDRMPRTDVSEGHYAQFISSIVHSNQILHC
DRKAIARVIEFSSRQADDQNMLSLHSVDIANLLREANYCARAANANMIRVSHVEQALFNKEKRICRAKDEFMQSFINGQT
LIDTQGETVGQVNGLSVMSTTDYQFGAPSRITATSSFGEGKVFDIERNVELSGSIHSKGVMILTAYIAAILGKTDKIPLS
THLTFEQSYGGVDGDSATMAELCAMLSSFSGKGIRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRRDTQGVII
PQSNVHNLMLRRDIVEAVEKGKFHIWAINHVNQAIELLTGCKVGTLNQQGDYPKNSILGLAQARLNGLRHRDTKD
>Mature_794_residues
PIKPLSSAKLYRASTLKKLSSDCKSTKHLEPLDEIVGQARAQQAVEFALSMKEKGYNIYALGRNGLGKRTMVLRHLNRQA
PNSNGRTLFDWCYVVNFDDSRSPKVLKLPAGMGLSFKKDIEKLMSKLLKALPLAFDNEMYYNRADRLKSQLTSRQEEALL
VLTEEAKRNSVGLSISAQGNYELVALNGEEPHTEESYVALSAQEQERMQNAISALEAQLRGIVRQITVWEEEYSEKQQKH
DEQVAEEVLTHALASLKQQYKEQTNVKSYIKAMHKDILDNLDIFLEESEEQAALAYASMSKKMPRRYQINVLVSQESQLQ
PIIVEETPNYHTIFGYVENATYKGTVFTDFSLIRPGSLHKANGGVLMIDAVKVLEHPYVWDGLKRALRSRKLSLTSLERE
VTLSGTISLDPEAIPLDVKIILFGDFATYKLLQQYDAEFTELFRVTADFEDRMPRTDVSEGHYAQFISSIVHSNQILHCD
RKAIARVIEFSSRQADDQNMLSLHSVDIANLLREANYCARAANANMIRVSHVEQALFNKEKRICRAKDEFMQSFINGQTL
IDTQGETVGQVNGLSVMSTTDYQFGAPSRITATSSFGEGKVFDIERNVELSGSIHSKGVMILTAYIAAILGKTDKIPLST
HLTFEQSYGGVDGDSATMAELCAMLSSFSGKGIRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRRDTQGVIIP
QSNVHNLMLRRDIVEAVEKGKFHIWAINHVNQAIELLTGCKVGTLNQQGDYPKNSILGLAQARLNGLRHRDTKD

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=412, Percent_Identity=37.1359223300971, Blast_Score=271, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 89058; Mature: 88926

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKPLSSAKLYRASTLKKLSSDCKSTKHLEPLDEIVGQARAQQAVEFALSMKEKGYNIY
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ALGRNGLGKRTMVLRHLNRQAPNSNGRTLFDWCYVVNFDDSRSPKVLKLPAGMGLSFKKD
EECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCHHHH
IEKLMSKLLKALPLAFDNEMYYNRADRLKSQLTSRQEEALLVLTEEAKRNSVGLSISAQG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCC
NYELVALNGEEPHTEESYVALSAQEQERMQNAISALEAQLRGIVRQITVWEEEYSEKQQK
CEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDEQVAEEVLTHALASLKQQYKEQTNVKSYIKAMHKDILDNLDIFLEESEEQAALAYASM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHEEEECCCHHHHHHHHHH
SKKMPRRYQINVLVSQESQLQPIIVEETPNYHTIFGYVENATYKGTVFTDFSLIRPGSLH
HHCCCCEEEEEEEEECCCCCCCEEEECCCCEEEEEEEEECCEECCEEEECEEEECCCCCE
KANGGVLMIDAVKVLEHPYVWDGLKRALRSRKLSLTSLEREVTLSGTISLDPEAIPLDVK
ECCCCEEEEEHHHHHCCCHHHHHHHHHHHHCCCHHHHHCEEEEEEEEEEECCCCCCEEEE
IILFGDFATYKLLQQYDAEFTELFRVTADFEDRMPRTDVSEGHYAQFISSIVHSNQILHC
EEEECCHHHHHHHHHHCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEC
DRKAIARVIEFSSRQADDQNMLSLHSVDIANLLREANYCARAANANMIRVSHVEQALFNK
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
EKRICRAKDEFMQSFINGQTLIDTQGETVGQVNGLSVMSTTDYQFGAPSRITATSSFGEG
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCC
KVFDIERNVELSGSIHSKGVMILTAYIAAILGKTDKIPLSTHLTFEQSYGGVDGDSATMA
EEEEEECCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCCCHHHH
ELCAMLSSFSGKGIRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRRDTQGVII
HHHHHHHHCCCCCCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEE
PQSNVHNLMLRRDIVEAVEKGKFHIWAINHVNQAIELLTGCKVGTLNQQGDYPKNSILGL
CCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
AQARLNGLRHRDTKD
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
PIKPLSSAKLYRASTLKKLSSDCKSTKHLEPLDEIVGQARAQQAVEFALSMKEKGYNIY
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ALGRNGLGKRTMVLRHLNRQAPNSNGRTLFDWCYVVNFDDSRSPKVLKLPAGMGLSFKKD
EECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCHHHH
IEKLMSKLLKALPLAFDNEMYYNRADRLKSQLTSRQEEALLVLTEEAKRNSVGLSISAQG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCC
NYELVALNGEEPHTEESYVALSAQEQERMQNAISALEAQLRGIVRQITVWEEEYSEKQQK
CEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDEQVAEEVLTHALASLKQQYKEQTNVKSYIKAMHKDILDNLDIFLEESEEQAALAYASM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHEEEECCCHHHHHHHHHH
SKKMPRRYQINVLVSQESQLQPIIVEETPNYHTIFGYVENATYKGTVFTDFSLIRPGSLH
HHCCCCEEEEEEEEECCCCCCCEEEECCCCEEEEEEEEECCEECCEEEECEEEECCCCCE
KANGGVLMIDAVKVLEHPYVWDGLKRALRSRKLSLTSLEREVTLSGTISLDPEAIPLDVK
ECCCCEEEEEHHHHHCCCHHHHHHHHHHHHCCCHHHHHCEEEEEEEEEEECCCCCCEEEE
IILFGDFATYKLLQQYDAEFTELFRVTADFEDRMPRTDVSEGHYAQFISSIVHSNQILHC
EEEECCHHHHHHHHHHCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEC
DRKAIARVIEFSSRQADDQNMLSLHSVDIANLLREANYCARAANANMIRVSHVEQALFNK
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
EKRICRAKDEFMQSFINGQTLIDTQGETVGQVNGLSVMSTTDYQFGAPSRITATSSFGEG
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCC
KVFDIERNVELSGSIHSKGVMILTAYIAAILGKTDKIPLSTHLTFEQSYGGVDGDSATMA
EEEEEECCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCCCHHHH
ELCAMLSSFSGKGIRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRRDTQGVII
HHHHHHHHCCCCCCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEE
PQSNVHNLMLRRDIVEAVEKGKFHIWAINHVNQAIELLTGCKVGTLNQQGDYPKNSILGL
CCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
AQARLNGLRHRDTKD
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]