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The map label for this gene is mmgC [H]

Identifier: 157961963

GI number: 157961963

Start: 2593672

End: 2594841

Strand: Direct

Name: mmgC [H]

Synonym: Spea_2142

Alternate gene names: 157961963

Gene position: 2593672-2594841 (Clockwise)

Preceding gene: 157961962

Following gene: 157961964

Centisome position: 50.12

GC content: 45.98

Gene sequence:

>1170_bases
ATGTATATTGATTTAACGCCAGAACAGCATCAATTGCGCTTAAAAATTCGGGATTACTTTACCAAGCTGATGACACCAGA
GCTCAAGGCTAAATTACGTGGAAAAGAGGGCGGAGACGACTATCGCGCTGTTATCGAGCAAATCGGTAAGGATGGTTGGT
TAGCGGTGGGATGGCCAAAAGAGTTTGGTGGCCAAGGCTATCAAGCGACTGAGCAGCTTATTTTCTTTGAAGAAGCCAAT
ATCGCAGGTGCGCCTCTACCATTTGTGACCATTAGTACGGTAGGTCCCGCATTAATGGAGCACGGCACAGAGTATCAAAA
GCAGAAGTTCTTACCGGGTATTGCCAGAGGAGAAATCATTTTTGCCATCGGTTATTCAGAACCTAATGCAGGTTCTGATC
TGGCTACATTGACCACGGCTGCAAAAGTTGAACAAGAAGGTTTTGTTGTCAATGGCAACAAAATGTGGACCTCTGGTGCT
GAGTCTGCTGATTATATTTGGCTGGCAGCTCGAACAGATCCAGAGCAGGCGCGGCATAAAGGTATTTCGATTATGATCGT
TGATACCCAAACTCCAGGTTTTTCACATACCGTGATCCCCACCTGTTCGAACCCAACGGCAGCAACTTACTATGACGACG
TTGTCGTACCAAAAGAAATGCTTGTTGGCGAGCTCAATCGGGGCTGGAAACTGATCACTTCCCAATTAAACCATGAGCGT
TTAGGGTTAGGAGCATGGTCAGATAAAGTGGTGAGTTTGTACCGTAAAGTTTACCTTTGGGCTAAGGCAAAAGATGAGCA
CGGCCGATGCGCAACTGATAATCCATGGGTGCGAAGCGCTTTAGCCAAGTGCTATTCGCGTTTAGAAGCAATGCGGCTGA
TTAATTTTAGAATTGCCGCAGATCTTGAGCAAGGGCAAATGGATGTTGCGTTGGCATCAATCACTAAAGTTTATGGTTCT
GAATCTGCAATTGAAATATTGCGTCTGTTACAAGATATTGTCGGCAGTAACGGCATGGTCCGTGAAGGTTCAAGCGCCTC
ATTATTACTTGGCGAACTCGAGTATGAAGTACGTGCTTCTGTCACGCTGACTTTTGGTGGTGGAACAAATGAGATCCAGC
GAGAGCTCATTGCGCAATTTGGATTGGGTTTACCCAGAGCACGTAACTAA

Upstream 100 bases:

>100_bases
GCTCTGCGGTCAATCAAGTCGATGATGTTGAGAACGTATTAGTTACAGCTGGAACAGGCGTGCCAACCAGTGGCCTGATT
TTAAGTGCGGAGGCTTAGGT

Downstream 100 bases:

>100_bases
AGTTAGAAGGATTTGCATCATGAGCGATATGGATTTATTTAAAAACGATGTAAAACAGTGGCTAGAAGAAAATTGCCCAC
ATTCTCTCAGAACGCCGACT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MYIDLTPEQHQLRLKIRDYFTKLMTPELKAKLRGKEGGDDYRAVIEQIGKDGWLAVGWPKEFGGQGYQATEQLIFFEEAN
IAGAPLPFVTISTVGPALMEHGTEYQKQKFLPGIARGEIIFAIGYSEPNAGSDLATLTTAAKVEQEGFVVNGNKMWTSGA
ESADYIWLAARTDPEQARHKGISIMIVDTQTPGFSHTVIPTCSNPTAATYYDDVVVPKEMLVGELNRGWKLITSQLNHER
LGLGAWSDKVVSLYRKVYLWAKAKDEHGRCATDNPWVRSALAKCYSRLEAMRLINFRIAADLEQGQMDVALASITKVYGS
ESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRASVTLTFGGGTNEIQRELIAQFGLGLPRARN

Sequences:

>Translated_389_residues
MYIDLTPEQHQLRLKIRDYFTKLMTPELKAKLRGKEGGDDYRAVIEQIGKDGWLAVGWPKEFGGQGYQATEQLIFFEEAN
IAGAPLPFVTISTVGPALMEHGTEYQKQKFLPGIARGEIIFAIGYSEPNAGSDLATLTTAAKVEQEGFVVNGNKMWTSGA
ESADYIWLAARTDPEQARHKGISIMIVDTQTPGFSHTVIPTCSNPTAATYYDDVVVPKEMLVGELNRGWKLITSQLNHER
LGLGAWSDKVVSLYRKVYLWAKAKDEHGRCATDNPWVRSALAKCYSRLEAMRLINFRIAADLEQGQMDVALASITKVYGS
ESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRASVTLTFGGGTNEIQRELIAQFGLGLPRARN
>Mature_389_residues
MYIDLTPEQHQLRLKIRDYFTKLMTPELKAKLRGKEGGDDYRAVIEQIGKDGWLAVGWPKEFGGQGYQATEQLIFFEEAN
IAGAPLPFVTISTVGPALMEHGTEYQKQKFLPGIARGEIIFAIGYSEPNAGSDLATLTTAAKVEQEGFVVNGNKMWTSGA
ESADYIWLAARTDPEQARHKGISIMIVDTQTPGFSHTVIPTCSNPTAATYYDDVVVPKEMLVGELNRGWKLITSQLNHER
LGLGAWSDKVVSLYRKVYLWAKAKDEHGRCATDNPWVRSALAKCYSRLEAMRLINFRIAADLEQGQMDVALASITKVYGS
ESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRASVTLTFGGGTNEIQRELIAQFGLGLPRARN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=384, Percent_Identity=26.0416666666667, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI226958414, Length=343, Percent_Identity=26.2390670553936, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4501857, Length=386, Percent_Identity=26.9430051813472, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI4501859, Length=331, Percent_Identity=27.4924471299094, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI4557233, Length=383, Percent_Identity=27.9373368146214, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI4557235, Length=342, Percent_Identity=26.3157894736842, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI76496475, Length=342, Percent_Identity=26.3157894736842, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI7656849, Length=346, Percent_Identity=25.7225433526012, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI21361497, Length=377, Percent_Identity=24.6684350132626, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI187960098, Length=290, Percent_Identity=26.2068965517241, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4557231, Length=290, Percent_Identity=26.2068965517241, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI211971008, Length=303, Percent_Identity=26.4026402640264, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI48976061, Length=303, Percent_Identity=26.0726072607261, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI4503943, Length=353, Percent_Identity=23.7960339943343, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI7669494, Length=353, Percent_Identity=23.7960339943343, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87081958, Length=383, Percent_Identity=24.8041775456919, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=383, Percent_Identity=25.5874673629243, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17508101, Length=384, Percent_Identity=25.2604166666667, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71990804, Length=287, Percent_Identity=28.2229965156794, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=350, Percent_Identity=26.8571428571429, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=397, Percent_Identity=25.6926952141058, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=396, Percent_Identity=25.7575757575758, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17534899, Length=392, Percent_Identity=24.7448979591837, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17570075, Length=392, Percent_Identity=23.7244897959184, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=237, Percent_Identity=26.5822784810127, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=336, Percent_Identity=25.297619047619, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=346, Percent_Identity=23.9884393063584, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=207, Percent_Identity=28.5024154589372, Blast_Score=95, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI32563615, Length=200, Percent_Identity=32, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17534353, Length=357, Percent_Identity=26.6106442577031, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=192, Percent_Identity=29.6875, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI21355753, Length=384, Percent_Identity=26.5625, Blast_Score=124, Evalue=9e-29,
Organism=Drosophila melanogaster, GI21356377, Length=343, Percent_Identity=28.8629737609329, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24666513, Length=311, Percent_Identity=27.9742765273312, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24646207, Length=379, Percent_Identity=27.9683377308707, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281363737, Length=394, Percent_Identity=26.3959390862944, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI19920834, Length=357, Percent_Identity=25.4901960784314, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24660351, Length=287, Percent_Identity=26.4808362369338, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42954; Mature: 42954

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIDLTPEQHQLRLKIRDYFTKLMTPELKAKLRGKEGGDDYRAVIEQIGKDGWLAVGWPK
CEECCCCCHHHEEEHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCH
EFGGQGYQATEQLIFFEEANIAGAPLPFVTISTVGPALMEHGTEYQKQKFLPGIARGEII
HHCCCCCCCHHEEEEEEECCCCCCCCCEEEHHHCCHHHHHCCCHHHHHHCCCCCCCCCEE
FAIGYSEPNAGSDLATLTTAAKVEQEGFVVNGNKMWTSGAESADYIWLAARTDPEQARHK
EEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCEEEEEECCCHHHHHHC
GISIMIVDTQTPGFSHTVIPTCSNPTAATYYDDVVVPKEMLVGELNRGWKLITSQLNHER
CCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHCCCHH
LGLGAWSDKVVSLYRKVYLWAKAKDEHGRCATDNPWVRSALAKCYSRLEAMRLINFRIAA
CCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
DLEQGQMDVALASITKVYGSESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRAS
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEECEEEEEE
VTLTFGGGTNEIQRELIAQFGLGLPRARN
EEEEECCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYIDLTPEQHQLRLKIRDYFTKLMTPELKAKLRGKEGGDDYRAVIEQIGKDGWLAVGWPK
CEECCCCCHHHEEEHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCH
EFGGQGYQATEQLIFFEEANIAGAPLPFVTISTVGPALMEHGTEYQKQKFLPGIARGEII
HHCCCCCCCHHEEEEEEECCCCCCCCCEEEHHHCCHHHHHCCCHHHHHHCCCCCCCCCEE
FAIGYSEPNAGSDLATLTTAAKVEQEGFVVNGNKMWTSGAESADYIWLAARTDPEQARHK
EEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCEEEEEECCCHHHHHHC
GISIMIVDTQTPGFSHTVIPTCSNPTAATYYDDVVVPKEMLVGELNRGWKLITSQLNHER
CCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHCCCHH
LGLGAWSDKVVSLYRKVYLWAKAKDEHGRCATDNPWVRSALAKCYSRLEAMRLINFRIAA
CCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
DLEQGQMDVALASITKVYGSESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRAS
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEECEEEEEE
VTLTFGGGTNEIQRELIAQFGLGLPRARN
EEEEECCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]