| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961946
Identifier: 157961946
GI number: 157961946
Start: 2572035
End: 2573798
Strand: Direct
Name: 157961946
Synonym: Spea_2125
Alternate gene names: NA
Gene position: 2572035-2573798 (Clockwise)
Preceding gene: 157961945
Following gene: 157961947
Centisome position: 49.71
GC content: 45.35
Gene sequence:
>1764_bases ATGACATTCAGTGCCTTAGATAAACCTACAAATGACAACCAAACCACTTTCGACATCATTATCGTTGGCTCTGGAGCTGG GGCAATGGCTTCATCTATTGTTGCCTCTGATCATGGCTTATCAGTATTAGTGGTTGAAAAGTCGGGTAAGTTTGGCGGAA CTTCAGCACTTTCTGGTGGTGGAATTTGGATCCCCAATAATGATCACTTCAAGGCAAAAGGTGGCCAGGACAGTTATCAA CAAGCATTTGATTACCTAAAAGCGTCTACCGAGAACAGAGTGTCAGACTCTAGATTACATGCCTACTTAACTCATGCTCC AGAAATGATCCGATATTTAGAGCGCAAAAGCCGCGTACGCTACGCCGTTGCCGAAAAATACCCAGATTATTATCCTCATC TTGAAGGATCGTTGGCTGGTGGGCGTACTCTTGATCCTGAAATATTTGATACCACATGCATGGGCGATGAGGTTGAAAAC CAGTTAAAGGCTTCAGCGTCTACGCTATTGATGGGAAAAATTGCGTGGACTGCCCGCGATGCTCATAAAGCGATGGCCCG TGAGCGCGGCTGGCGATTATTACTGTTAAAGCTGATCATGAAATATAAGCTTGATTTTGGTCAACGCCGTAAAACTCGGC GCGATAGACGGGCAGCGTTAGGCAGCTCATTAGTTGCTTCACTTAGGCAGTCAATGACAGATCGGAATATTCCGCTTTGG CTTGATACAGACTTTACCGATATCGTGTTTAGTCAAGATAGAGTTTGTGGAATTGAAGTCGTCCGTGATGGTGAAAAACA AACACTTAACGCAAAGCTAGCGGTGATTTTTGCAAGTGGGGGGTTTGAGCAAAATCAGAAGCTTAGGGATAAGTATCTGC CGAGCCCATCAAATGTTAAGTGGAGCGCAACGCCTCCAGGTAATAACACTGGCGCGGCTTTAGAAGCAGGGATCCGTGCT GGTGCAAACACAGATATCATGGATTGGTGTTGGTGGTCACCTACAGTGAAGGTGCCTAAAGAAGATAAAGCAAGAGGCCT TTTTGCTGAACGTGCTTTTCCCGGTGCAATTGTCGTTGATGGCTTGGGCAAGCGCTTTGTTAATGAGGCCGCTCCTTACC TAGAGTTTGGTGATGCAATGTATCGAAATAATGCGGCAACAGACGGTAAGTCTCTACCTGCATGGGTGATATTCGATGCA AACTTTAGGTTTAACTACGCCATGGGGCCTTTTATGCCGGCACAAATTCAGCCCGATAGTCGATTACCTAAAGGCTGGTT AAATACCCTTTATTGGAAGGCTGATAGTCTCGATGAATTGGCCAAACAGATTAAAATAGATGCCGATGGACTTTCACATA CTGTAGAGCGGATCAATCGGTTTGCAACAACTGGGGTTGATGAAGATTTTGGCCGAGGGAGTAATGTTTTCGACCGCTAT TATGGTGACACCAATGTTAAACCTAACCCTTGTTTAGCACCAATAGTTAAGGGGCCTTTTTATGCTATGCGAATTGAAGC GGGGGATATTGGAACTAAAGGGGGTTTGCTAACCAATGAGCATGCTCAGGTAATGAATACAGACAACATGCCGATTGCTG GACTCTACGCTATCGGTAACTGTTCAGCTTCTGTAATGGGTCAAAGTTATCCAGGTGCTGGAGCAACGTTAGGCCCTGCT ATGACCTTTGGCTATATCGCCGCAAATCATATAGCAAAGGACATTACAAAGGACCTGACTAATGGCAAACAAACTACTCT CTAG
Upstream 100 bases:
>100_bases CCAAATTTAGTGGATTGTGTATTCCACTAGTTAACACGCTTCTTGCTGATACCGAGCAGGGAGTACTGGTAATCATTAGT TCACAATAGTGAGATAGCAA
Downstream 100 bases:
>100_bases CATTGAACAGGCTTTTACTCTGCTGTTATTTTGCCACTCTGACGAAGCATATTGTATATACAGTTGTGATTCGTTAATTG AAGGTATGCGTGCTTGGCCT
Product: fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MTFSALDKPTNDNQTTFDIIIVGSGAGAMASSIVASDHGLSVLVVEKSGKFGGTSALSGGGIWIPNNDHFKAKGGQDSYQ QAFDYLKASTENRVSDSRLHAYLTHAPEMIRYLERKSRVRYAVAEKYPDYYPHLEGSLAGGRTLDPEIFDTTCMGDEVEN QLKASASTLLMGKIAWTARDAHKAMARERGWRLLLLKLIMKYKLDFGQRRKTRRDRRAALGSSLVASLRQSMTDRNIPLW LDTDFTDIVFSQDRVCGIEVVRDGEKQTLNAKLAVIFASGGFEQNQKLRDKYLPSPSNVKWSATPPGNNTGAALEAGIRA GANTDIMDWCWWSPTVKVPKEDKARGLFAERAFPGAIVVDGLGKRFVNEAAPYLEFGDAMYRNNAATDGKSLPAWVIFDA NFRFNYAMGPFMPAQIQPDSRLPKGWLNTLYWKADSLDELAKQIKIDADGLSHTVERINRFATTGVDEDFGRGSNVFDRY YGDTNVKPNPCLAPIVKGPFYAMRIEAGDIGTKGGLLTNEHAQVMNTDNMPIAGLYAIGNCSASVMGQSYPGAGATLGPA MTFGYIAANHIAKDITKDLTNGKQTTL
Sequences:
>Translated_587_residues MTFSALDKPTNDNQTTFDIIIVGSGAGAMASSIVASDHGLSVLVVEKSGKFGGTSALSGGGIWIPNNDHFKAKGGQDSYQ QAFDYLKASTENRVSDSRLHAYLTHAPEMIRYLERKSRVRYAVAEKYPDYYPHLEGSLAGGRTLDPEIFDTTCMGDEVEN QLKASASTLLMGKIAWTARDAHKAMARERGWRLLLLKLIMKYKLDFGQRRKTRRDRRAALGSSLVASLRQSMTDRNIPLW LDTDFTDIVFSQDRVCGIEVVRDGEKQTLNAKLAVIFASGGFEQNQKLRDKYLPSPSNVKWSATPPGNNTGAALEAGIRA GANTDIMDWCWWSPTVKVPKEDKARGLFAERAFPGAIVVDGLGKRFVNEAAPYLEFGDAMYRNNAATDGKSLPAWVIFDA NFRFNYAMGPFMPAQIQPDSRLPKGWLNTLYWKADSLDELAKQIKIDADGLSHTVERINRFATTGVDEDFGRGSNVFDRY YGDTNVKPNPCLAPIVKGPFYAMRIEAGDIGTKGGLLTNEHAQVMNTDNMPIAGLYAIGNCSASVMGQSYPGAGATLGPA MTFGYIAANHIAKDITKDLTNGKQTTL >Mature_586_residues TFSALDKPTNDNQTTFDIIIVGSGAGAMASSIVASDHGLSVLVVEKSGKFGGTSALSGGGIWIPNNDHFKAKGGQDSYQQ AFDYLKASTENRVSDSRLHAYLTHAPEMIRYLERKSRVRYAVAEKYPDYYPHLEGSLAGGRTLDPEIFDTTCMGDEVENQ LKASASTLLMGKIAWTARDAHKAMARERGWRLLLLKLIMKYKLDFGQRRKTRRDRRAALGSSLVASLRQSMTDRNIPLWL DTDFTDIVFSQDRVCGIEVVRDGEKQTLNAKLAVIFASGGFEQNQKLRDKYLPSPSNVKWSATPPGNNTGAALEAGIRAG ANTDIMDWCWWSPTVKVPKEDKARGLFAERAFPGAIVVDGLGKRFVNEAAPYLEFGDAMYRNNAATDGKSLPAWVIFDAN FRFNYAMGPFMPAQIQPDSRLPKGWLNTLYWKADSLDELAKQIKIDADGLSHTVERINRFATTGVDEDFGRGSNVFDRYY GDTNVKPNPCLAPIVKGPFYAMRIEAGDIGTKGGLLTNEHAQVMNTDNMPIAGLYAIGNCSASVMGQSYPGAGATLGPAM TFGYIAANHIAKDITKDLTNGKQTTL
Specific function: Dehydrogenates steroids by introducing a double bond in steroid ring A (Probable) [H]
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase 2 family. 3-oxosteroid dehydrogenase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003953 [H]
Pfam domain/function: PF00890 FAD_binding_2 [H]
EC number: =1.3.99.4 [H]
Molecular weight: Translated: 64387; Mature: 64255
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSALDKPTNDNQTTFDIIIVGSGAGAMASSIVASDHGLSVLVVEKSGKFGGTSALSGG CCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC GIWIPNNDHFKAKGGQDSYQQAFDYLKASTENRVSDSRLHAYLTHAPEMIRYLERKSRVR EEECCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YAVAEKYPDYYPHLEGSLAGGRTLDPEIFDTTCMGDEVENQLKASASTLLMGKIAWTARD HHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHEEEHHHHHHHH AHKAMARERGWRLLLLKLIMKYKLDFGQRRKTRRDRRAALGSSLVASLRQSMTDRNIPLW HHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LDTDFTDIVFSQDRVCGIEVVRDGEKQTLNAKLAVIFASGGFEQNQKLRDKYLPSPSNVK ECCCCHHEEECCCCEEEEEEEECCCCCEECEEEEEEEECCCCCCCHHHHHHCCCCCCCEE WSATPPGNNTGAALEAGIRAGANTDIMDWCWWSPTVKVPKEDKARGLFAERAFPGAIVVD EECCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHCCCHHHHCCCCEEEEC GLGKRFVNEAAPYLEFGDAMYRNNAATDGKSLPAWVIFDANFRFNYAMGPFMPAQIQPDS CHHHHHHHHCCCHHHHCHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCC RLPKGWLNTLYWKADSLDELAKQIKIDADGLSHTVERINRFATTGVDEDFGRGSNVFDRY CCCHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHH YGDTNVKPNPCLAPIVKGPFYAMRIEAGDIGTKGGLLTNEHAQVMNTDNMPIAGLYAIGN CCCCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCEEECCCHHEECCCCCCEEEEEEECC CSASVMGQSYPGAGATLGPAMTFGYIAANHIAKDITKDLTNGKQTTL CCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TFSALDKPTNDNQTTFDIIIVGSGAGAMASSIVASDHGLSVLVVEKSGKFGGTSALSGG CCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC GIWIPNNDHFKAKGGQDSYQQAFDYLKASTENRVSDSRLHAYLTHAPEMIRYLERKSRVR EEECCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YAVAEKYPDYYPHLEGSLAGGRTLDPEIFDTTCMGDEVENQLKASASTLLMGKIAWTARD HHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHEEEHHHHHHHH AHKAMARERGWRLLLLKLIMKYKLDFGQRRKTRRDRRAALGSSLVASLRQSMTDRNIPLW HHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LDTDFTDIVFSQDRVCGIEVVRDGEKQTLNAKLAVIFASGGFEQNQKLRDKYLPSPSNVK ECCCCHHEEECCCCEEEEEEEECCCCCEECEEEEEEEECCCCCCCHHHHHHCCCCCCCEE WSATPPGNNTGAALEAGIRAGANTDIMDWCWWSPTVKVPKEDKARGLFAERAFPGAIVVD EECCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHCCCHHHHCCCCEEEEC GLGKRFVNEAAPYLEFGDAMYRNNAATDGKSLPAWVIFDANFRFNYAMGPFMPAQIQPDS CHHHHHHHHCCCHHHHCHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCC RLPKGWLNTLYWKADSLDELAKQIKIDADGLSHTVERINRFATTGVDEDFGRGSNVFDRY CCCHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHH YGDTNVKPNPCLAPIVKGPFYAMRIEAGDIGTKGGLLTNEHAQVMNTDNMPIAGLYAIGN CCCCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCEEECCCHHEECCCCCCEEEEEEECC CSASVMGQSYPGAGATLGPAMTFGYIAANHIAKDITKDLTNGKQTTL CCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1657885 [H]