| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is mhpE [C]
Identifier: 157961937
GI number: 157961937
Start: 2560582
End: 2561604
Strand: Reverse
Name: mhpE [C]
Synonym: Spea_2116
Alternate gene names: 157961937
Gene position: 2561604-2560582 (Counterclockwise)
Preceding gene: 157961938
Following gene: 157961936
Centisome position: 49.5
GC content: 47.21
Gene sequence:
>1023_bases ATGAACTTAACTGGAAAAAAAGTTATCTTACACGATATGTCATTAAGAGACGGCATGCATGCTCGCCAACACCAAATTAG TTTGAAAGAGATGGTTGATGTTGCGACAGGACTCGATGCTGCAGGCGTACCTTTAATCGAAGTGACCCACGGTGATGGCC TTGGCGGTGCCTCACTCAATTACGGATTTCCTGCGCACACCGATGAAGAATACTTAAGCGCGGTGATCCCTAAAATGAAG CAGGCAAAAGTATCTGCTTTGTTGTTACCTGGGATAGGTACGGGTGATCATTTGCGCATGGCCCATGACCTCGGGGTTAA TACTATCCGTGTTGCAACCCATTGTACTGAGGCGGATGTATCTGGGCAGCATATTTCGTTATCACGTGAATTAGGCCTAG ATACAGTAGGGTTTCTTATGATGGCTCATATGGTTAGCCCTGATAAATTACTTGAGCAAGCCAAACTGATGGAGTCCTAC GGTGCGAACTGTATTTACTGCACCGACTCTGCAGGTTATATGCTGCCAGGAGACGTAACTTCGCATATTGAGCGCTTACG CGGAGAGCTAAAAAGCGATACCCAAATTGGTTTTCATGGCCACCATAATATGGGAATGAGTATCGCGAACTCCCTAGCTG CAATCCAAGCTGGTGCTGAGCGAATAGATGGCTCAGTCGCAGGTTTAGGAGCTGGAGCAGGCAACACCCCCCTAGAGGTA TTCGTTGCCGTTCTTGAGCGTATGCAAGTAAGCCACGGGATTAATTTGTATGACATTATGGACGTAGCTGAAGATCTGGT TACCCCGATGATGGATCAGCCTATAAGAATCGACAGAGATGCACTGACGTTAGGCTATGCAGGCGTTTACTCATCATTCT TATTATTTGCTCAGAGAGCCGAGAAAAAACATGGCATTCCAGCGAGAGATATACTGCTCGAACTGGGTAGGCGTGGCACT GTTGGCGGCCAAGAAGATATGATTGACGACACGGCAATGAATATGGCCAGAGAACGCGCATAA
Upstream 100 bases:
>100_bases TGCAGCAGCCAGAACAGCAGAAATGCTAGCGTCCAAAATGCTCAATGTTAAAACCCATCTTAACGTTACCAAAGAAGCGG CGCTAGCCTAGGAGATCACG
Downstream 100 bases:
>100_bases CTATGGTCAGCTGCGCTAACAATAACGGACAACAGTGGCGCCGACACGGTCTGCTACTGTTGTTGACCTTATTTTATGGT GAAACTTTCATCGGTAGGCA
Product: 4-hydroxy-2-ketovalerate aldolase
Products: NA
Alternate protein names: HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxopentanoate aldolase [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MNLTGKKVILHDMSLRDGMHARQHQISLKEMVDVATGLDAAGVPLIEVTHGDGLGGASLNYGFPAHTDEEYLSAVIPKMK QAKVSALLLPGIGTGDHLRMAHDLGVNTIRVATHCTEADVSGQHISLSRELGLDTVGFLMMAHMVSPDKLLEQAKLMESY GANCIYCTDSAGYMLPGDVTSHIERLRGELKSDTQIGFHGHHNMGMSIANSLAAIQAGAERIDGSVAGLGAGAGNTPLEV FVAVLERMQVSHGINLYDIMDVAEDLVTPMMDQPIRIDRDALTLGYAGVYSSFLLFAQRAEKKHGIPARDILLELGRRGT VGGQEDMIDDTAMNMARERA
Sequences:
>Translated_340_residues MNLTGKKVILHDMSLRDGMHARQHQISLKEMVDVATGLDAAGVPLIEVTHGDGLGGASLNYGFPAHTDEEYLSAVIPKMK QAKVSALLLPGIGTGDHLRMAHDLGVNTIRVATHCTEADVSGQHISLSRELGLDTVGFLMMAHMVSPDKLLEQAKLMESY GANCIYCTDSAGYMLPGDVTSHIERLRGELKSDTQIGFHGHHNMGMSIANSLAAIQAGAERIDGSVAGLGAGAGNTPLEV FVAVLERMQVSHGINLYDIMDVAEDLVTPMMDQPIRIDRDALTLGYAGVYSSFLLFAQRAEKKHGIPARDILLELGRRGT VGGQEDMIDDTAMNMARERA >Mature_340_residues MNLTGKKVILHDMSLRDGMHARQHQISLKEMVDVATGLDAAGVPLIEVTHGDGLGGASLNYGFPAHTDEEYLSAVIPKMK QAKVSALLLPGIGTGDHLRMAHDLGVNTIRVATHCTEADVSGQHISLSRELGLDTVGFLMMAHMVSPDKLLEQAKLMESY GANCIYCTDSAGYMLPGDVTSHIERLRGELKSDTQIGFHGHHNMGMSIANSLAAIQAGAERIDGSVAGLGAGAGNTPLEV FVAVLERMQVSHGINLYDIMDVAEDLVTPMMDQPIRIDRDALTLGYAGVYSSFLLFAQRAEKKHGIPARDILLELGRRGT VGGQEDMIDDTAMNMARERA
Specific function: Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxy-2-oxovalerate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1786548, Length=337, Percent_Identity=54.5994065281899, Blast_Score=369, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017629 - InterPro: IPR013785 - InterPro: IPR012425 - InterPro: IPR000891 - ProDom: PD005364 [H]
Pfam domain/function: PF07836 DmpG_comm; PF00682 HMGL-like [H]
EC number: =4.1.3.39 [H]
Molecular weight: Translated: 36540; Mature: 36540
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTGKKVILHDMSLRDGMHARQHQISLKEMVDVATGLDAAGVPLIEVTHGDGLGGASLN CCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC YGFPAHTDEEYLSAVIPKMKQAKVSALLLPGIGTGDHLRMAHDLGVNTIRVATHCTEADV CCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCC SGQHISLSRELGLDTVGFLMMAHMVSPDKLLEQAKLMESYGANCIYCTDSAGYMLPGDVT CCCEEEEHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCEECCCHHH SHIERLRGELKSDTQIGFHGHHNMGMSIANSLAAIQAGAERIDGSVAGLGAGAGNTPLEV HHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHH FVAVLERMQVSHGINLYDIMDVAEDLVTPMMDQPIRIDRDALTLGYAGVYSSFLLFAQRA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHH EKKHGIPARDILLELGRRGTVGGQEDMIDDTAMNMARERA HHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLTGKKVILHDMSLRDGMHARQHQISLKEMVDVATGLDAAGVPLIEVTHGDGLGGASLN CCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC YGFPAHTDEEYLSAVIPKMKQAKVSALLLPGIGTGDHLRMAHDLGVNTIRVATHCTEADV CCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCC SGQHISLSRELGLDTVGFLMMAHMVSPDKLLEQAKLMESYGANCIYCTDSAGYMLPGDVT CCCEEEEHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCEECCCHHH SHIERLRGELKSDTQIGFHGHHNMGMSIANSLAAIQAGAERIDGSVAGLGAGAGNTPLEV HHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHH FVAVLERMQVSHGINLYDIMDVAEDLVTPMMDQPIRIDRDALTLGYAGVYSSFLLFAQRA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHH EKKHGIPARDILLELGRRGTVGGQEDMIDDTAMNMARERA HHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA