Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 157961902

GI number: 157961902

Start: 2520504

End: 2522264

Strand: Direct

Name: mmgC [H]

Synonym: Spea_2081

Alternate gene names: 157961902

Gene position: 2520504-2522264 (Clockwise)

Preceding gene: 157961900

Following gene: 157961905

Centisome position: 48.71

GC content: 45.32

Gene sequence:

>1761_bases
ATGAACCCGTATAACGCCCCGTTAGCTGAGATGCGCTTCTTACTTGAAAAAGTCTTTGATGCACCAAAAACTTGGTCTGA
AATGCCTGCAATGGCAGAGACTGTTGATATGGATACTGCTGCGGCTATTTTAGATGAAGCTGACAAGATTAGCCGAGAGC
TAATCCATCCTATTAACCGCAGTGGTGATGAGCAAGGTGTACGTCACGAAGCTGATAAGGTGATCACACCTGATGGTTAT
AAAGCAGTTTATGACCAATATGCAGAGGGTGGCTGGGTAGGTTTATGTGGCGATCCAGAATTTGGAGGCATGGGAATGCC
GAAGATGCTGGGCGTGCTTGTTGATGAGATGGCATACAGCGCTTGTAATGCATTTACGCTGTACGGCTCATTAACTGCAG
GTGCTGCGCTGGCTATTCATGCTCATGGCAGTGAGGAAATCAAAGAGCAGTATCTGCCTATGATGTATAGCGGTGAGTGG
GCTGGAGCCATGGATATGACTGAGCCACAAGCGGGTTCGGATCTACGTAACATCCGCACCAAGGCTGTGCCTAATGAAGA
TGGTAGCTACAAGATCACAGGTAGTAAGATTTTCATTACAGGTGGCGATCATGATTTAACAGAAAATGTGATTCACTTAG
TATTGGCTAAGTTACCAAACACCAACGGCATTTCATTGTTCCTAGTGCCAAAAATTAAGGTGAATGCAGATAATAGTTTA
GGTGATGCTAATGGCGTGACAGTGGGTTCTATTGAACACAAGATGGGGCTTAAGGGCTCGGCAACTTGTGTAATGAACTT
CGATGATGCTGAGGGTTACCTGATTGGTAAACCGAACCGCGGTCTAGTGTGTATGTTTACCATGATGAACTATGAACGTT
TAGCCATTGGTATTCAGGGGCTAGGTACTTCACAAGCAGCATATCAAATGGCGGCTGATTATGCGAAAGAGCGAGTGCAG
GGCGTTGCAGCGGGTGGTTCTCCAACGGGGGCTAACTGCGATCCAATCCTAGTCCATGGCGATGTTAGACGTATGCTATT
AACGATTAGAACCTTGACTGAGGCAGGGCGTGCATTATCTGTCTATACCGGTCAGCAATTGGATTTAGCTAAGTACTCAG
AGGACCCCGATGTTAAAGCTAAGGCTAGCCGCTTTATGGGACTGCTCACACCTGTTTCAAAAGCCTTCTTAAGTGATCGC
GGGCTTGACGCTGCCATCATGGCCCAGCAAGTGTTTGGTGGACATGGTTACATTCGCGAAACGGGGATCGAACAGCTAGT
CCGTGATACCCGTATTGCTCAGATCTATGAAGGCACTAACGGTATTCAAGCGATTGATTTCCTCGGCCGTAAAGTCACAG
GAGACAATGTAACCGCACTGTCAGAATTTATTACTGAGCAAGTGGCTAACATCAATGGATATCAACATGTTAGTGACGCA
GATAAAACTCGGATACTAGGATTGTTAGAGCAACTACTCGTGGTTGCAAAACAGGTTAACGAAAACAAACTATCGCATCC
AGCCCTGATTAACGCTTGTGCCGTCGATTATTTGGATGCCTTCGGTTATAGTCTTTATGGTTGCTTCTGGTTAGCAATGG
TTAATGCGGCTAATGATCACGATGATGATAATTTTAAACAGCAAAAATCGCACCTTAATCGTTTCTATTTTGACAAGTTA
ATAGCTAAAGCAGATTTCCATTTATCACAGGTTAGCATGGGTGATGCTTCTATCATGCAGATGGATGCCGAGCTATTCTA
A

Upstream 100 bases:

>100_bases
GTTGGTTTTACTAAAAGATTTATCGTGAAAAGGGTGTCATTTGCAGCTACTTCTGATAGATTTGAAACAACTGTTTAAAT
CTATTGTTTAAGAGCCCTAT

Downstream 100 bases:

>100_bases
GCAGACTTTGCGATAAGCTAGTCCTGCAAATAAAAACGCCACTTTTAAAGTGGCGTTTTTATTTGTTATTAAAACTTGAA
GATAATTTGGTCTAGTTTGT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MNPYNAPLAEMRFLLEKVFDAPKTWSEMPAMAETVDMDTAAAILDEADKISRELIHPINRSGDEQGVRHEADKVITPDGY
KAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYSACNAFTLYGSLTAGAALAIHAHGSEEIKEQYLPMMYSGEW
AGAMDMTEPQAGSDLRNIRTKAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISLFLVPKIKVNADNSL
GDANGVTVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPNRGLVCMFTMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQ
GVAAGGSPTGANCDPILVHGDVRRMLLTIRTLTEAGRALSVYTGQQLDLAKYSEDPDVKAKASRFMGLLTPVSKAFLSDR
GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVTALSEFITEQVANINGYQHVSDA
DKTRILGLLEQLLVVAKQVNENKLSHPALINACAVDYLDAFGYSLYGCFWLAMVNAANDHDDDNFKQQKSHLNRFYFDKL
IAKADFHLSQVSMGDASIMQMDAELF

Sequences:

>Translated_586_residues
MNPYNAPLAEMRFLLEKVFDAPKTWSEMPAMAETVDMDTAAAILDEADKISRELIHPINRSGDEQGVRHEADKVITPDGY
KAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYSACNAFTLYGSLTAGAALAIHAHGSEEIKEQYLPMMYSGEW
AGAMDMTEPQAGSDLRNIRTKAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISLFLVPKIKVNADNSL
GDANGVTVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPNRGLVCMFTMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQ
GVAAGGSPTGANCDPILVHGDVRRMLLTIRTLTEAGRALSVYTGQQLDLAKYSEDPDVKAKASRFMGLLTPVSKAFLSDR
GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVTALSEFITEQVANINGYQHVSDA
DKTRILGLLEQLLVVAKQVNENKLSHPALINACAVDYLDAFGYSLYGCFWLAMVNAANDHDDDNFKQQKSHLNRFYFDKL
IAKADFHLSQVSMGDASIMQMDAELF
>Mature_586_residues
MNPYNAPLAEMRFLLEKVFDAPKTWSEMPAMAETVDMDTAAAILDEADKISRELIHPINRSGDEQGVRHEADKVITPDGY
KAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYSACNAFTLYGSLTAGAALAIHAHGSEEIKEQYLPMMYSGEW
AGAMDMTEPQAGSDLRNIRTKAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISLFLVPKIKVNADNSL
GDANGVTVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPNRGLVCMFTMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQ
GVAAGGSPTGANCDPILVHGDVRRMLLTIRTLTEAGRALSVYTGQQLDLAKYSEDPDVKAKASRFMGLLTPVSKAFLSDR
GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVTALSEFITEQVANINGYQHVSDA
DKTRILGLLEQLLVVAKQVNENKLSHPALINACAVDYLDAFGYSLYGCFWLAMVNAANDHDDDNFKQQKSHLNRFYFDKL
IAKADFHLSQVSMGDASIMQMDAELF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=437, Percent_Identity=27.2311212814645, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI4501859, Length=413, Percent_Identity=26.1501210653753, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI4557235, Length=407, Percent_Identity=27.5184275184275, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI76496475, Length=407, Percent_Identity=27.5184275184275, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI21361497, Length=364, Percent_Identity=28.8461538461538, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI226958412, Length=392, Percent_Identity=26.530612244898, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI226958414, Length=377, Percent_Identity=27.0557029177719, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI7656849, Length=368, Percent_Identity=25.8152173913043, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI4557233, Length=437, Percent_Identity=25.4004576659039, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI4503943, Length=321, Percent_Identity=28.6604361370716, Blast_Score=78, Evalue=3e-14,
Organism=Escherichia coli, GI87082384, Length=355, Percent_Identity=26.1971830985915, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI87081958, Length=380, Percent_Identity=25.7894736842105, Blast_Score=77, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=406, Percent_Identity=27.8325123152709, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17569725, Length=394, Percent_Identity=30.7106598984772, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17534899, Length=446, Percent_Identity=26.0089686098655, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71985184, Length=380, Percent_Identity=27.8947368421053, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=406, Percent_Identity=25.8620689655172, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=411, Percent_Identity=26.5206812652068, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=407, Percent_Identity=25.3071253071253, Blast_Score=99, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI86563383, Length=297, Percent_Identity=29.2929292929293, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI86563381, Length=297, Percent_Identity=29.2929292929293, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=363, Percent_Identity=27.5482093663912, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71985192, Length=258, Percent_Identity=30.6201550387597, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17534353, Length=323, Percent_Identity=26.9349845201238, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17505929, Length=435, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=254, Percent_Identity=27.9527559055118, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=228, Percent_Identity=27.1929824561404, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=439, Percent_Identity=23.2346241457859, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355753, Length=446, Percent_Identity=26.457399103139, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI281363737, Length=447, Percent_Identity=26.6219239373602, Blast_Score=117, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24666513, Length=409, Percent_Identity=28.8508557457213, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=26.063829787234, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646207, Length=314, Percent_Identity=26.1146496815287, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24660351, Length=387, Percent_Identity=27.6485788113695, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI19920834, Length=337, Percent_Identity=28.1899109792285, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63745; Mature: 63745

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYNAPLAEMRFLLEKVFDAPKTWSEMPAMAETVDMDTAAAILDEADKISRELIHPINR
CCCCCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
SGDEQGVRHEADKVITPDGYKAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYS
CCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
ACNAFTLYGSLTAGAALAIHAHGSEEIKEQYLPMMYSGEWAGAMDMTEPQAGSDLRNIRT
HHCCEEEEECCCCCCEEEEECCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHH
KAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISLFLVPKIKVNADNSL
HCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC
GDANGVTVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPNRGLVCMFTMMNYERLAIGIQG
CCCCCEEEECCHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEEECC
LGTSQAAYQMAADYAKERVQGVAAGGSPTGANCDPILVHGDVRRMLLTIRTLTEAGRALS
CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEE
VYTGQQLDLAKYSEDPDVKAKASRFMGLLTPVSKAFLSDRGLDAAIMAQQVFGGHGYIRE
EECCCCEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH
TGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVTALSEFITEQVANINGYQHVSDA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCH
DKTRILGLLEQLLVVAKQVNENKLSHPALINACAVDYLDAFGYSLYGCFWLAMVNAANDH
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DDDNFKQQKSHLNRFYFDKLIAKADFHLSQVSMGDASIMQMDAELF
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNPYNAPLAEMRFLLEKVFDAPKTWSEMPAMAETVDMDTAAAILDEADKISRELIHPINR
CCCCCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
SGDEQGVRHEADKVITPDGYKAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYS
CCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
ACNAFTLYGSLTAGAALAIHAHGSEEIKEQYLPMMYSGEWAGAMDMTEPQAGSDLRNIRT
HHCCEEEEECCCCCCEEEEECCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHH
KAVPNEDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTNGISLFLVPKIKVNADNSL
HCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC
GDANGVTVGSIEHKMGLKGSATCVMNFDDAEGYLIGKPNRGLVCMFTMMNYERLAIGIQG
CCCCCEEEECCHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEEECC
LGTSQAAYQMAADYAKERVQGVAAGGSPTGANCDPILVHGDVRRMLLTIRTLTEAGRALS
CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEE
VYTGQQLDLAKYSEDPDVKAKASRFMGLLTPVSKAFLSDRGLDAAIMAQQVFGGHGYIRE
EECCCCEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH
TGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVTALSEFITEQVANINGYQHVSDA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCH
DKTRILGLLEQLLVVAKQVNENKLSHPALINACAVDYLDAFGYSLYGCFWLAMVNAANDH
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DDDNFKQQKSHLNRFYFDKLIAKADFHLSQVSMGDASIMQMDAELF
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]