| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yaiL [H]
Identifier: 157961900
GI number: 157961900
Start: 2518482
End: 2519024
Strand: Direct
Name: yaiL [H]
Synonym: Spea_2079
Alternate gene names: 157961900
Gene position: 2518482-2519024 (Clockwise)
Preceding gene: 157961899
Following gene: 157961902
Centisome position: 48.67
GC content: 39.78
Gene sequence:
>543_bases ATGGCAAACCCATTTCAAGAGCAGCTTCTTAAAGCTGGTTTAGTAAGTAAACAAAAAGTTCGTGACACTAAAACTCAAAA GCGTCGTGATAGAAAAGCTAAGGTCGATGATGGCTCTGAGGCGCTTAAGAAAGAGATAGCCGCGAAGAAACAAGCTCAGA TTGAAAAAGACAAACAATTAAATGAGCAACGCTTTGCAGCAGCAAGCGAAAAAGGCCTAGTACGTGGACTGGTTACTGAG TTTAAAAGGTTTGCAATTTCAGCACCGAGAGATGCTGAAATTAAGTTTAACTATACCTTTGAGAATAAGATCTTTTCATT ATACGTAAATGAAAAGATTCAGGGCGAATTGCTTAATGGCCATCTAGGTATTATTCGTCATGAAGAAGTTAGTTATCTTG TGCCGCATAAGTTAGCTGAGCGGGTTAACTTACTAGTACCAGAGTGGGTAGGCTATCTTTGGTCTCAGGAAGACAGTACT GAGGTCGTTGAGGAAGATGATCCATACGCAGATTATGTTATTCCTGATGATCTAATGTGGTAA
Upstream 100 bases:
>100_bases GCAATCGCCGAGATCGGCCAATTAGCTAGACGCAACTAAGTAAGATACGAATAAAAGTTCAGTACAATTAGAGTAATCGT TAATTTAGAGATTTTTAGAT
Downstream 100 bases:
>100_bases CCACTATTCTGTTAAACAGTGACGTTTAAAGCCGTAATGATCAACTCATTATGGCTTTTTTTTTGCCTCTTCTTAAACTA GTTTGCCTTGTTGCATGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MANPFQEQLLKAGLVSKQKVRDTKTQKRRDRKAKVDDGSEALKKEIAAKKQAQIEKDKQLNEQRFAAASEKGLVRGLVTE FKRFAISAPRDAEIKFNYTFENKIFSLYVNEKIQGELLNGHLGIIRHEEVSYLVPHKLAERVNLLVPEWVGYLWSQEDST EVVEEDDPYADYVIPDDLMW
Sequences:
>Translated_180_residues MANPFQEQLLKAGLVSKQKVRDTKTQKRRDRKAKVDDGSEALKKEIAAKKQAQIEKDKQLNEQRFAAASEKGLVRGLVTE FKRFAISAPRDAEIKFNYTFENKIFSLYVNEKIQGELLNGHLGIIRHEEVSYLVPHKLAERVNLLVPEWVGYLWSQEDST EVVEEDDPYADYVIPDDLMW >Mature_179_residues ANPFQEQLLKAGLVSKQKVRDTKTQKRRDRKAKVDDGSEALKKEIAAKKQAQIEKDKQLNEQRFAAASEKGLVRGLVTEF KRFAISAPRDAEIKFNYTFENKIFSLYVNEKIQGELLNGHLGIIRHEEVSYLVPHKLAERVNLLVPEWVGYLWSQEDSTE VVEEDDPYADYVIPDDLMW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=189, Percent_Identity=35.978835978836, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 20809; Mature: 20678
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPFQEQLLKAGLVSKQKVRDTKTQKRRDRKAKVDDGSEALKKEIAAKKQAQIEKDKQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NEQRFAAASEKGLVRGLVTEFKRFAISAPRDAEIKFNYTFENKIFSLYVNEKIQGELLNG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCEECCC HLGIIRHEEVSYLVPHKLAERVNLLVPEWVGYLWSQEDSTEVVEEDDPYADYVIPDDLMW CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure ANPFQEQLLKAGLVSKQKVRDTKTQKRRDRKAKVDDGSEALKKEIAAKKQAQIEKDKQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NEQRFAAASEKGLVRGLVTEFKRFAISAPRDAEIKFNYTFENKIFSLYVNEKIQGELLNG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCEECCC HLGIIRHEEVSYLVPHKLAERVNLLVPEWVGYLWSQEDSTEVVEEDDPYADYVIPDDLMW CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]