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The map label for this gene is yciM [H]

Identifier: 157961897

GI number: 157961897

Start: 2515616

End: 2516776

Strand: Direct

Name: yciM [H]

Synonym: Spea_2076

Alternate gene names: 157961897

Gene position: 2515616-2516776 (Clockwise)

Preceding gene: 157961896

Following gene: 157961898

Centisome position: 48.61

GC content: 43.76

Gene sequence:

>1161_bases
ATGTTAGAAATCCTGTTTCTGCTTCTTCCAATAGCAGCCGGTTACGGTTGGTATATGGGACGCAGAAGTGTCAGACAAAA
GCAGACAAATCAGCGAAAACAGCTGAGCCGAGACTATTTTACTGGGCTTAACTTTCTGTTGTCTAATGAGTCAGATAAAG
CCGTCGATCTGTTTATCAGTATGCTTGATGTCGATGACGATACTATCGATACCCATCTTTCTCTAGGCTCACTATTTCGT
AAGCGCGGTGAAGTAGACCGCTCGATCCGCATTCATCAAAACTTAATTGCTAGACCGAGTCTAACCACAGAGCAAAGAGA
CATTGCTATGATGGAGCTTGGCAAAGATTATCTCGCTGCTGGTTTTTATGATCGTGCAGAAGAGATCTTTATCAATTTGG
TCAATCAAGATGACCACAGCGAAGAATCTGAGACTCAACTGATTGCGATATACCAAGTGACTAAAGATTGGCAGAAAGCC
ATCGATATTATCAAAAAGCTCAAGCGTAAGCGTCAGCATGAACTTAAACACGACAGCGCCCATTTTTATTGTGAGTTGGC
AAACGAAGCCGAAGATGATGCGCTTAAGCTTAAGAATTTACAGTTAGCGATTAAACAAGATAGCCAGTGTGCTCGTGCCT
TATTAACGCTCGCTGAGCAATATTTGAAACAAGAAGAATTCAAGTCTTGTAAACAAGCCATTGAAAAACTGCTAACAACG
GATATCGACCTAGTACCGGATGCCTTGGCCATTGCTAAAGAAGCATACTTGCTGACAAACGACAGTACGGGTTATCAAGA
GCTACTTAGAGAGGCGATTGAAAAGGGGGCTGGTGCAAGCGTCACCATTACCCTTGCTCAGCACATGATTGAGCAAGGCC
ACCCGAAGGATGCAGAGAAGTTAATTATGGAAGGTCTAATAAGACACCCAACCATGAAGAGCTTTCAGCACCTAATGAAG
ATGCAATTACTGCAAGCGGAAGAAGGGCAGGCAAAGAAGAGCTTATCGATGCTAGAGCAGCTTGTAGAACAACAAATTAA
ATATCGACCAGGGTATCGCTGCCGAGAATGTGGCTTCCCATCACACAGATTATATTGGCATTGCCCCTCCTGTAAGCATT
GGGGCAGCATTAAAAGGATCAGAGGTCTAGACGGAGAGTAA

Upstream 100 bases:

>100_bases
TTACGTCGTGCAAACAAAAAACTGTCTGTATATGAAGACAAGCAAGAGCAGTCAAAATTGGTGGCAGTGAAAAGCACTGA
CAAAGAAGTAGACGCTTAAT

Downstream 100 bases:

>100_bases
CCGTTAGAGCTTCTGGTTTATCAACAAAAACAGTAAAACCTACACCGCAAAGCGATTGGAGAAAGAATGACTGACAAGCC
TATTTTAGTTGCCCTAGACT

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDDTIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEESETQLIAIYQVTKDWQKA
IDIIKKLKRKRQHELKHDSAHFYCELANEAEDDALKLKNLQLAIKQDSQCARALLTLAEQYLKQEEFKSCKQAIEKLLTT
DIDLVPDALAIAKEAYLLTNDSTGYQELLREAIEKGAGASVTITLAQHMIEQGHPKDAEKLIMEGLIRHPTMKSFQHLMK
MQLLQAEEGQAKKSLSMLEQLVEQQIKYRPGYRCRECGFPSHRLYWHCPSCKHWGSIKRIRGLDGE

Sequences:

>Translated_386_residues
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDDTIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEESETQLIAIYQVTKDWQKA
IDIIKKLKRKRQHELKHDSAHFYCELANEAEDDALKLKNLQLAIKQDSQCARALLTLAEQYLKQEEFKSCKQAIEKLLTT
DIDLVPDALAIAKEAYLLTNDSTGYQELLREAIEKGAGASVTITLAQHMIEQGHPKDAEKLIMEGLIRHPTMKSFQHLMK
MQLLQAEEGQAKKSLSMLEQLVEQQIKYRPGYRCRECGFPSHRLYWHCPSCKHWGSIKRIRGLDGE
>Mature_386_residues
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDDTIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEESETQLIAIYQVTKDWQKA
IDIIKKLKRKRQHELKHDSAHFYCELANEAEDDALKLKNLQLAIKQDSQCARALLTLAEQYLKQEEFKSCKQAIEKLLTT
DIDLVPDALAIAKEAYLLTNDSTGYQELLREAIEKGAGASVTITLAQHMIEQGHPKDAEKLIMEGLIRHPTMKSFQHLMK
MQLLQAEEGQAKKSLSMLEQLVEQQIKYRPGYRCRECGFPSHRLYWHCPSCKHWGSIKRIRGLDGE

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=381, Percent_Identity=43.8320209973753, Blast_Score=341, Evalue=4e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44503; Mature: 44503

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFIS
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MLDVDDDTIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAA
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHH
GFYDRAEEIFINLVNQDDHSEESETQLIAIYQVTKDWQKAIDIIKKLKRKRQHELKHDSA
HHHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HFYCELANEAEDDALKLKNLQLAIKQDSQCARALLTLAEQYLKQEEFKSCKQAIEKLLTT
CEEEEECCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIDLVPDALAIAKEAYLLTNDSTGYQELLREAIEKGAGASVTITLAQHMIEQGHPKDAEK
CHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHH
LIMEGLIRHPTMKSFQHLMKMQLLQAEEGQAKKSLSMLEQLVEQQIKYRPGYRCRECGFP
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
SHRLYWHCPSCKHWGSIKRIRGLDGE
CCCEEEECCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFIS
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MLDVDDDTIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAA
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHH
GFYDRAEEIFINLVNQDDHSEESETQLIAIYQVTKDWQKAIDIIKKLKRKRQHELKHDSA
HHHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HFYCELANEAEDDALKLKNLQLAIKQDSQCARALLTLAEQYLKQEEFKSCKQAIEKLLTT
CEEEEECCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIDLVPDALAIAKEAYLLTNDSTGYQELLREAIEKGAGASVTITLAQHMIEQGHPKDAEK
CHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHH
LIMEGLIRHPTMKSFQHLMKMQLLQAEEGQAKKSLSMLEQLVEQQIKYRPGYRCRECGFP
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
SHRLYWHCPSCKHWGSIKRIRGLDGE
CCCEEEECCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]