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The map label for this gene is yciS [H]

Identifier: 157961896

GI number: 157961896

Start: 2515294

End: 2515614

Strand: Direct

Name: yciS [H]

Synonym: Spea_2075

Alternate gene names: 157961896

Gene position: 2515294-2515614 (Clockwise)

Preceding gene: 157961895

Following gene: 157961897

Centisome position: 48.61

GC content: 39.88

Gene sequence:

>321_bases
ATGGAGCAAAACGTGAAGTCATTTATCATTGCTTTTTTAGTCGCTGCGTTTTTTTTCTTAGCGCTTATCTTTGGTGCCCG
TAACGAGCAGGTCGTCACCATAAGTTATTTTGTTGCTCAGGGTGAATTTAGATTACCAGTAGTCTTAGCTTTTGTTTTTA
TGGCTGGTTTCTTGGTGAGCTGGATATTTGCCATGTACCATATCGCAGGCCTTAAATTGTCTTTACGTCGTGCAAACAAA
AAACTGTCTGTATATGAAGACAAGCAAGAGCAGTCAAAATTGGTGGCAGTGAAAAGCACTGACAAAGAAGTAGACGCTTA
A

Upstream 100 bases:

>100_bases
ATTAAAAGCCTCCATTAGGAGGCTTTTTTATACCTAAAACTTAGGTATCACTAGCTAGTTCTCTCTTTTTCTTAGATAAT
TAAACGTCACATACGCGTTC

Downstream 100 bases:

>100_bases
TATGTTAGAAATCCTGTTTCTGCTTCTTCCAATAGCAGCCGGTTACGGTTGGTATATGGGACGCAGAAGTGTCAGACAAA
AGCAGACAAATCAGCGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MEQNVKSFIIAFLVAAFFFLALIFGARNEQVVTISYFVAQGEFRLPVVLAFVFMAGFLVSWIFAMYHIAGLKLSLRRANK
KLSVYEDKQEQSKLVAVKSTDKEVDA

Sequences:

>Translated_106_residues
MEQNVKSFIIAFLVAAFFFLALIFGARNEQVVTISYFVAQGEFRLPVVLAFVFMAGFLVSWIFAMYHIAGLKLSLRRANK
KLSVYEDKQEQSKLVAVKSTDKEVDA
>Mature_106_residues
MEQNVKSFIIAFLVAAFFFLALIFGARNEQVVTISYFVAQGEFRLPVVLAFVFMAGFLVSWIFAMYHIAGLKLSLRRANK
KLSVYEDKQEQSKLVAVKSTDKEVDA

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1222 [H]

Homologues:

Organism=Escherichia coli, GI1787535, Length=93, Percent_Identity=36.5591397849462, Blast_Score=66, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010445 [H]

Pfam domain/function: PF06305 DUF1049 [H]

EC number: NA

Molecular weight: Translated: 12017; Mature: 12017

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNVKSFIIAFLVAAFFFLALIFGARNEQVVTISYFVAQGEFRLPVVLAFVFMAGFLVS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
WIFAMYHIAGLKLSLRRANKKLSVYEDKQEQSKLVAVKSTDKEVDA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEECCCCCCCC
>Mature Secondary Structure
MEQNVKSFIIAFLVAAFFFLALIFGARNEQVVTISYFVAQGEFRLPVVLAFVFMAGFLVS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
WIFAMYHIAGLKLSLRRANKKLSVYEDKQEQSKLVAVKSTDKEVDA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]