| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961878
Identifier: 157961878
GI number: 157961878
Start: 2489806
End: 2490237
Strand: Reverse
Name: 157961878
Synonym: Spea_2057
Alternate gene names: NA
Gene position: 2490237-2489806 (Counterclockwise)
Preceding gene: 157961879
Following gene: 157961875
Centisome position: 48.12
GC content: 37.96
Gene sequence:
>432_bases TTGTCTCATTCATCAAAAGATGCTGAGTATTTACCCGGAGTAATTAATCTTTTAGAAAGTCACGGGGCATCCGTATATTG TGATTTAGGAGATAATAGGCTCCCTGATAATCCAAACCCTGAAACAGCGGCAATATTGAAAAATCAAATTAAAGTCAGCC GTAAACTTATAGTATTTGTTACTACAAACAGTAAGGATTCAAAGTGGGTTCCGTGGGAGCTTGGTATAGCTGATGAGAGT TTATCAACTAATAATGTAGCTTTATTGCCGGCAGCAACATTCAACTATGAACAGTCTTGGGCGCAGCAAGAGTATTTGGG ATTGTATAGGCATATAGTGTGGGGAAAAATGAAAGGTGAACAAAAATCTTTATGGATGGTATACGATCAGCATACAAACA CAGCTACTAAATTAAGTGAATGGCTGGCTTAG
Upstream 100 bases:
>100_bases AACATTTGAAGATCTTAAAAGGTTTAATGATAAGTTAACGCTTAATGAAAGGGCCGTACTTAAATCCAATTCTTCAGCAA AGAGTAACAAAGATACGTTC
Downstream 100 bases:
>100_bases TGCTAAATGCACCTAATGAGCTGTTCATGTCTGTTGACCTAAATATCCTAATCCAAACGCCCACCTTTAGTGCCTTAGCT CTAAATCGTTTCTGTCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSHSSKDAEYLPGVINLLESHGASVYCDLGDNRLPDNPNPETAAILKNQIKVSRKLIVFVTTNSKDSKWVPWELGIADES LSTNNVALLPAATFNYEQSWAQQEYLGLYRHIVWGKMKGEQKSLWMVYDQHTNTATKLSEWLA
Sequences:
>Translated_143_residues MSHSSKDAEYLPGVINLLESHGASVYCDLGDNRLPDNPNPETAAILKNQIKVSRKLIVFVTTNSKDSKWVPWELGIADES LSTNNVALLPAATFNYEQSWAQQEYLGLYRHIVWGKMKGEQKSLWMVYDQHTNTATKLSEWLA >Mature_142_residues SHSSKDAEYLPGVINLLESHGASVYCDLGDNRLPDNPNPETAAILKNQIKVSRKLIVFVTTNSKDSKWVPWELGIADESL STNNVALLPAATFNYEQSWAQQEYLGLYRHIVWGKMKGEQKSLWMVYDQHTNTATKLSEWLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16168; Mature: 16037
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSSKDAEYLPGVINLLESHGASVYCDLGDNRLPDNPNPETAAILKNQIKVSRKLIVFV CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHEEEEEEEEEE TTNSKDSKWVPWELGIADESLSTNNVALLPAATFNYEQSWAQQEYLGLYRHIVWGKMKGE EECCCCCEECCEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC QKSLWMVYDQHTNTATKLSEWLA CCEEEEEEECCCCHHHHHHHHCC >Mature Secondary Structure SHSSKDAEYLPGVINLLESHGASVYCDLGDNRLPDNPNPETAAILKNQIKVSRKLIVFV CCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHEEEEEEEEEE TTNSKDSKWVPWELGIADESLSTNNVALLPAATFNYEQSWAQQEYLGLYRHIVWGKMKGE EECCCCCEECCEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC QKSLWMVYDQHTNTATKLSEWLA CCEEEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA