| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961871
Identifier: 157961871
GI number: 157961871
Start: 2483440
End: 2484654
Strand: Reverse
Name: 157961871
Synonym: Spea_2050
Alternate gene names: NA
Gene position: 2484654-2483440 (Counterclockwise)
Preceding gene: 157961872
Following gene: 157961870
Centisome position: 48.02
GC content: 41.32
Gene sequence:
>1215_bases ATGACAGTAAGCATTGAAAATATGACAAGTCAAAACTCAGAGCAAAATTGGGATATATTTTGCGCTGTCGTCGACAATTA CGGTGACATAGGTGTTACATGGCGCCTTGCTAAACAGTTATCCGCAGAGCAGAAAATCAACGTCACACTTTGGGTCGATG ATTTAAACAGTTTTCAGCACATTTTGCCGCACTTGGATCCAAACCAAGTGACTCAAAGTCATTGTGGCATCAAAATAAAT CAATGGTCAGAGCCTTTAAAAATCGACTATAAAGTAGGTGACGTACTTATTGAAGCCTTTGCATGTGAATTACCCGCACA GGTAAAGCAACAGCTAGTAACGGCTAAGCAAGCTTATTTCGATAACAGTAAAAATAAAAAGCCACCGGTTTGGTTAAACC TGGAATATCTCAGTGCTGAGTCATGGGTCGAAGGATGCCATGGATTGCCCTCAATGCAGGCAAGCGGAATTAAGAAGTAT TTTTATTTCCCTGGATTTAGCGATAAAACTGGCGGACTTATCTGCGAGAAGACGCTTTTCACAGATAGAGAACATTGGCA ACTTGATACACAAAACCGTCAAAATTTGTTTAAATCATTAGGGCTAACGGGTATTGACGAGACCGATACGGTAATTAGTG TGTTTAGCTATGAATCTAGTGCGTTATTAGCCCTTTGCCAGCATTGGCAAGCAAATGACACCAAGACTCACGCGTTAATC CCTAAGGGCAGAAGCCTCAATAGCTTACAATCGATTCTCCCCTGCTCCATTGATGAATTGACGCCCGGAATGCAAATTGC TTTCGGTAACTTGGTCATTCATATCTTGCCGATGACAGATCAAGAGGGCTATGACAAGCTCCTCTGGAGCTGTGATTTTA ATATTGTACGCGGCGAAGATTCATTTTTAAGGGCTCAATGGGCTGCAAAACCGTTCATTTGGCACATATATGAGCAAGAA GAGGACTATCATCTAATAAAATTAGATGCCTTTATGCAGCTTTACTGTAATAATCTGCCGTCAGAATTAGCGATGAGCTG GAAAGGGCTTAATCTTGCCTTCAATCAAGAGCAAGCGGCACTGACTTGTGAATACTGGCAACAACTTAATTTAGCTGATT TGCCATTGCAGCAACACGCAAAGCAATGGCCAATCGATGCAATAAATGATGTAGATCTTGTTTCTCGACTAGTTCAATTC GTCAAAAATAGCTAA
Upstream 100 bases:
>100_bases GCTTTGCTGAACTTCTTGTAAAAGCGGCATTATAATATGCCGCTTTTTTGTCTCAAAAATAAACAGCAAATCTTGGTTAA TCAAAAAGCTGATATCGGTT
Downstream 100 bases:
>100_bases GATACTACGTTTAAATAGAAAAACCTAAAATAGGAAATAGTGTAATGAAAACTGCTCATGAACTCCGTCCTGGTAACGTG ATCATGTTAGATGGCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTVSIENMTSQNSEQNWDIFCAVVDNYGDIGVTWRLAKQLSAEQKINVTLWVDDLNSFQHILPHLDPNQVTQSHCGIKIN QWSEPLKIDYKVGDVLIEAFACELPAQVKQQLVTAKQAYFDNSKNKKPPVWLNLEYLSAESWVEGCHGLPSMQASGIKKY FYFPGFSDKTGGLICEKTLFTDREHWQLDTQNRQNLFKSLGLTGIDETDTVISVFSYESSALLALCQHWQANDTKTHALI PKGRSLNSLQSILPCSIDELTPGMQIAFGNLVIHILPMTDQEGYDKLLWSCDFNIVRGEDSFLRAQWAAKPFIWHIYEQE EDYHLIKLDAFMQLYCNNLPSELAMSWKGLNLAFNQEQAALTCEYWQQLNLADLPLQQHAKQWPIDAINDVDLVSRLVQF VKNS
Sequences:
>Translated_404_residues MTVSIENMTSQNSEQNWDIFCAVVDNYGDIGVTWRLAKQLSAEQKINVTLWVDDLNSFQHILPHLDPNQVTQSHCGIKIN QWSEPLKIDYKVGDVLIEAFACELPAQVKQQLVTAKQAYFDNSKNKKPPVWLNLEYLSAESWVEGCHGLPSMQASGIKKY FYFPGFSDKTGGLICEKTLFTDREHWQLDTQNRQNLFKSLGLTGIDETDTVISVFSYESSALLALCQHWQANDTKTHALI PKGRSLNSLQSILPCSIDELTPGMQIAFGNLVIHILPMTDQEGYDKLLWSCDFNIVRGEDSFLRAQWAAKPFIWHIYEQE EDYHLIKLDAFMQLYCNNLPSELAMSWKGLNLAFNQEQAALTCEYWQQLNLADLPLQQHAKQWPIDAINDVDLVSRLVQF VKNS >Mature_403_residues TVSIENMTSQNSEQNWDIFCAVVDNYGDIGVTWRLAKQLSAEQKINVTLWVDDLNSFQHILPHLDPNQVTQSHCGIKINQ WSEPLKIDYKVGDVLIEAFACELPAQVKQQLVTAKQAYFDNSKNKKPPVWLNLEYLSAESWVEGCHGLPSMQASGIKKYF YFPGFSDKTGGLICEKTLFTDREHWQLDTQNRQNLFKSLGLTGIDETDTVISVFSYESSALLALCQHWQANDTKTHALIP KGRSLNSLQSILPCSIDELTPGMQIAFGNLVIHILPMTDQEGYDKLLWSCDFNIVRGEDSFLRAQWAAKPFIWHIYEQEE DYHLIKLDAFMQLYCNNLPSELAMSWKGLNLAFNQEQAALTCEYWQQLNLADLPLQQHAKQWPIDAINDVDLVSRLVQFV KNS
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46173; Mature: 46042
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSIENMTSQNSEQNWDIFCAVVDNYGDIGVTWRLAKQLSAEQKINVTLWVDDLNSFQH CEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEECCHHHHHH ILPHLDPNQVTQSHCGIKINQWSEPLKIDYKVGDVLIEAFACELPAQVKQQLVTAKQAYF HHCCCCHHHHHHHHCCEEEECCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DNSKNKKPPVWLNLEYLSAESWVEGCHGLPSMQASGIKKYFYFPGFSDKTGGLICEKTLF CCCCCCCCCEEEEEEEECHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHH TDREHWQLDTQNRQNLFKSLGLTGIDETDTVISVFSYESSALLALCQHWQANDTKTHALI CCCHHCEECCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEC PKGRSLNSLQSILPCSIDELTPGMQIAFGNLVIHILPMTDQEGYDKLLWSCDFNIVRGED CCCCCHHHHHHHCCCCHHHCCCCCEEEECCEEEEEEECCCCCCHHHEEEEECCEEEECCC SFLRAQWAAKPFIWHIYEQEEDYHLIKLDAFMQLYCNNLPSELAMSWKGLNLAFNQEQAA HHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCE LTCEYWQQLNLADLPLQQHAKQWPIDAINDVDLVSRLVQFVKNS EEHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TVSIENMTSQNSEQNWDIFCAVVDNYGDIGVTWRLAKQLSAEQKINVTLWVDDLNSFQH EEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEECCHHHHHH ILPHLDPNQVTQSHCGIKINQWSEPLKIDYKVGDVLIEAFACELPAQVKQQLVTAKQAYF HHCCCCHHHHHHHHCCEEEECCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DNSKNKKPPVWLNLEYLSAESWVEGCHGLPSMQASGIKKYFYFPGFSDKTGGLICEKTLF CCCCCCCCCEEEEEEEECHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHH TDREHWQLDTQNRQNLFKSLGLTGIDETDTVISVFSYESSALLALCQHWQANDTKTHALI CCCHHCEECCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEC PKGRSLNSLQSILPCSIDELTPGMQIAFGNLVIHILPMTDQEGYDKLLWSCDFNIVRGED CCCCCHHHHHHHCCCCHHHCCCCCEEEECCEEEEEEECCCCCCHHHEEEEECCEEEECCC SFLRAQWAAKPFIWHIYEQEEDYHLIKLDAFMQLYCNNLPSELAMSWKGLNLAFNQEQAA HHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCE LTCEYWQQLNLADLPLQQHAKQWPIDAINDVDLVSRLVQFVKNS EEHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA