| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is fldA [H]
Identifier: 157961872
GI number: 157961872
Start: 2484779
End: 2485306
Strand: Reverse
Name: fldA [H]
Synonym: Spea_2051
Alternate gene names: 157961872
Gene position: 2485306-2484779 (Counterclockwise)
Preceding gene: 157961873
Following gene: 157961871
Centisome position: 48.03
GC content: 44.7
Gene sequence:
>528_bases ATGGCAACTGTAGGTCTTTTTTTCGGGTCTGATACAGGCAACACCGAAGCCGTCGCCAAAATGATCCAGAAGAAACTGGG CAAAAAAATGGTTGAGGTGAAAGATATCGCCAAAAGTACCAAGGAGCAAATTGCAGATTACGATCTGCTAATTTTCGGCA TTCCAACTTGGTATTACGGTGAAGCACAATGTGACTGGGATGACTTTTTCCCTGAACTTGAGCAGATCAACTTCGAAGAC AAGTTAGTCGCAATCTTTGGTTGTGGCGATCAAGAGGATTACGCTGAGTATTTCCTTGATGCGATGGGCATGGTCAACGA AATCGTTGAAGCTCGTGGCGCTATCGTAATTGGTCACTGGCCAACCGAAGGCTATGATTTCGAAGAGTCAAAAGGCTTAG CAGACGACAAACACTTTGTTGGATTAGGTATCGACGAAGATCGTCAACCTGAGCTAACTGAAGAACGTGTTGACGCATGG GTTAAGCAGATCCACGAAGAGATGTGTTTAGCTGAATTAGAAGACTAG
Upstream 100 bases:
>100_bases GCCAACTAATCGAATCTATACTGCAAAAGCTGGTTAGTAACTAATCCACTTTAAATACACGCATACCATTAATAGTTAAC TAGATATTAAAGGAACAACA
Downstream 100 bases:
>100_bases AAGTTAACTTGAAAGCCAAATTTGGCTTTGCTGAACTTCTTGTAAAAGCGGCATTATAATATGCCGCTTTTTTGTCTCAA AAATAAACAGCAAATCTTGG
Product: flavodoxin FldA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIADYDLLIFGIPTWYYGEAQCDWDDFFPELEQINFED KLVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHWPTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEERVDAW VKQIHEEMCLAELED
Sequences:
>Translated_175_residues MATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIADYDLLIFGIPTWYYGEAQCDWDDFFPELEQINFED KLVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHWPTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEERVDAW VKQIHEEMCLAELED >Mature_174_residues ATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIADYDLLIFGIPTWYYGEAQCDWDDFFPELEQINFEDK LVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHWPTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEERVDAWV KQIHEEMCLAELED
Specific function: Low-potential electron donor to a number of redox enzymes (Potential). Involved in the reactivation of inactive cob(II)alamin in methionine synthase [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=173, Percent_Identity=71.6763005780347, Blast_Score=270, Evalue=5e-74, Organism=Escherichia coli, GI1789262, Length=168, Percent_Identity=42.2619047619048, Blast_Score=151, Evalue=2e-38,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 19894; Mature: 19763
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIADYDLLIFGIPTWYYG CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECC EAQCDWDDFFPELEQINFEDKLVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHW CCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC PTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEERVDAWVKQIHEEMCLAELED CCCCCCCHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATVGLFFGSDTGNTEAVAKMIQKKLGKKMVEVKDIAKSTKEQIADYDLLIFGIPTWYYG CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECC EAQCDWDDFFPELEQINFEDKLVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHW CCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC PTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEERVDAWVKQIHEEMCLAELED CCCCCCCHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]