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The map label for this gene is nlpB [H]

Identifier: 157961804

GI number: 157961804

Start: 2405142

End: 2406239

Strand: Direct

Name: nlpB [H]

Synonym: Spea_1981

Alternate gene names: 157961804

Gene position: 2405142-2406239 (Clockwise)

Preceding gene: 157961803

Following gene: 157961805

Centisome position: 46.48

GC content: 41.44

Gene sequence:

>1098_bases
ATGCTAAAGCAAATATCACCACTGATTTTAGTTGCAGCCGTTACGGCATGTAGTACGCCAATTGACAGAAGGCAAGCTAA
CGACACTGATCAGAATTATCAAGATCTAACAGTTGAGCCACAATTAGTTATTCCTGAAGGCTTACATAAGCCGACATACA
GTAAAGAATACGATATTCCTGCTGTAGGGAGTAAAGCCGATGCAAGCTTAGTCGGTAAGAGTTTAGATATTCGTCCACCT
CTACAGGTACTGCCAATGGCTGAAGGTACTCGTGTAGAAGACGGGACTGATAATATTAAAATCGTTGTTGAGTCTATTGA
TAACGATATCGATCTTAAACAAGAACTTTTTGATGTCCTAAAAGATTATTTCGCTAGCAAGTCGATTTCGCTTCGCAGTG
AAGATTACGAGAACGGCACACTTGAGACCGATTGGATTGAAAGTGAACAGGTCATCGAATCCAGTTTTTGGGGTGGCGAT
AAAGTTTATAAGCTTAAGCAACGTTACATCTATCATGTCGATGTGCGCCCACATGGTCGCAGTGGTAACTTAACCATAGA
TCTTATCGAACATGAAGAAAGTTTCGACGGCGATCAGCAAGACATCCTATTAAGTGGTGAAGATAAACGTCGTTATACGA
TTGATAGATTGAATGACTCTATTAGCTATATCAGCATTGAGCGTGCCAAGGCACTTAAGGCTAAACGTCTTAAGCAAAGC
TTAGGTATCGATGTCGATCTGATTGCTCAAGCCGAAGAGCAAGCATATTGGTTGGCAGACGCTAAGTTTAAACGCACTTG
GGATCGTCTACGCATTGTATTACCTGAGATGGGTTTTGAGATCATCGATATGGACAGCAATAAAGGGCTGCTTTATATCA
ATATTACCGATGACTCTGGGTTCTGGAGTTCATTATGGAGCGATAAAGAGTTGCCTATCGAGGCTGGCTCTTACCGTATT
GAGCTAAAAGACGGAGCGGATAATAAAACAGAGATCCATCTGTTAAATGCGAAAAATGAACCACTTTCTAGTGAAGTTGT
TAGCGCAGTTTATGACGGTTTCTCCGAGTTAATGCAAGAAGATCGTAAGACGCGTTAA

Upstream 100 bases:

>100_bases
CAACGGAACAATTCGTTTACCTTTGACTGAACTTTCTACCGAGTTTCATGGTCTGTTGCTAGAAGCGATGAAAAATGCCC
GAATAGAGGTTAAATAATAA

Downstream 100 bases:

>100_bases
CACGTGACGAAAAATAAAAAGGAGCCTTAGGCTCCTTTTTTGTTTTCAGCCCTAAACCACTTTCTTCAAAAGGCGGATTC
TTTACTATTTACGCAATGAG

Product: NlpB/DapX family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MLKQISPLILVAAVTACSTPIDRRQANDTDQNYQDLTVEPQLVIPEGLHKPTYSKEYDIPAVGSKADASLVGKSLDIRPP
LQVLPMAEGTRVEDGTDNIKIVVESIDNDIDLKQELFDVLKDYFASKSISLRSEDYENGTLETDWIESEQVIESSFWGGD
KVYKLKQRYIYHVDVRPHGRSGNLTIDLIEHEESFDGDQQDILLSGEDKRRYTIDRLNDSISYISIERAKALKAKRLKQS
LGIDVDLIAQAEEQAYWLADAKFKRTWDRLRIVLPEMGFEIIDMDSNKGLLYINITDDSGFWSSLWSDKELPIEAGSYRI
ELKDGADNKTEIHLLNAKNEPLSSEVVSAVYDGFSELMQEDRKTR

Sequences:

>Translated_365_residues
MLKQISPLILVAAVTACSTPIDRRQANDTDQNYQDLTVEPQLVIPEGLHKPTYSKEYDIPAVGSKADASLVGKSLDIRPP
LQVLPMAEGTRVEDGTDNIKIVVESIDNDIDLKQELFDVLKDYFASKSISLRSEDYENGTLETDWIESEQVIESSFWGGD
KVYKLKQRYIYHVDVRPHGRSGNLTIDLIEHEESFDGDQQDILLSGEDKRRYTIDRLNDSISYISIERAKALKAKRLKQS
LGIDVDLIAQAEEQAYWLADAKFKRTWDRLRIVLPEMGFEIIDMDSNKGLLYINITDDSGFWSSLWSDKELPIEAGSYRI
ELKDGADNKTEIHLLNAKNEPLSSEVVSAVYDGFSELMQEDRKTR
>Mature_365_residues
MLKQISPLILVAAVTACSTPIDRRQANDTDQNYQDLTVEPQLVIPEGLHKPTYSKEYDIPAVGSKADASLVGKSLDIRPP
LQVLPMAEGTRVEDGTDNIKIVVESIDNDIDLKQELFDVLKDYFASKSISLRSEDYENGTLETDWIESEQVIESSFWGGD
KVYKLKQRYIYHVDVRPHGRSGNLTIDLIEHEESFDGDQQDILLSGEDKRRYTIDRLNDSISYISIERAKALKAKRLKQS
LGIDVDLIAQAEEQAYWLADAKFKRTWDRLRIVLPEMGFEIIDMDSNKGLLYINITDDSGFWSSLWSDKELPIEAGSYRI
ELKDGADNKTEIHLLNAKNEPLSSEVVSAVYDGFSELMQEDRKTR

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=346, Percent_Identity=23.9884393063584, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 41485; Mature: 41485

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQISPLILVAAVTACSTPIDRRQANDTDQNYQDLTVEPQLVIPEGLHKPTYSKEYDIP
CCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEECCCEEECCCCCCCCCCCCCCCCC
AVGSKADASLVGKSLDIRPPLQVLPMAEGTRVEDGTDNIKIVVESIDNDIDLKQELFDVL
CCCCCCCHHHHCCCCCCCCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
KDYFASKSISLRSEDYENGTLETDWIESEQVIESSFWGGDKVYKLKQRYIYHVDVRPHGR
HHHHCCCCEEECCCCCCCCCEECCCCCHHHHHHHHCCCCCHHHEEEEEEEEEEECCCCCC
SGNLTIDLIEHEESFDGDQQDILLSGEDKRRYTIDRLNDSISYISIERAKALKAKRLKQS
CCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEHHHCCCCEEEEEEHHHHHHHHHHHHHH
LGIDVDLIAQAEEQAYWLADAKFKRTWDRLRIVLPEMGFEIIDMDSNKGLLYINITDDSG
HCCCEEEEECCCCCEEEEECCHHHHHHHHHEEEECCCCCEEEEECCCCCEEEEEEECCCC
FWSSLWSDKELPIEAGSYRIELKDGADNKTEIHLLNAKNEPLSSEVVSAVYDGFSELMQE
HHHHHCCCCCCCEECCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
DRKTR
HHCCC
>Mature Secondary Structure
MLKQISPLILVAAVTACSTPIDRRQANDTDQNYQDLTVEPQLVIPEGLHKPTYSKEYDIP
CCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEECCCEEECCCCCCCCCCCCCCCCC
AVGSKADASLVGKSLDIRPPLQVLPMAEGTRVEDGTDNIKIVVESIDNDIDLKQELFDVL
CCCCCCCHHHHCCCCCCCCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
KDYFASKSISLRSEDYENGTLETDWIESEQVIESSFWGGDKVYKLKQRYIYHVDVRPHGR
HHHHCCCCEEECCCCCCCCCEECCCCCHHHHHHHHCCCCCHHHEEEEEEEEEEECCCCCC
SGNLTIDLIEHEESFDGDQQDILLSGEDKRRYTIDRLNDSISYISIERAKALKAKRLKQS
CCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEHHHCCCCEEEEEEHHHHHHHHHHHHHH
LGIDVDLIAQAEEQAYWLADAKFKRTWDRLRIVLPEMGFEIIDMDSNKGLLYINITDDSG
HCCCEEEEECCCCCEEEEECCHHHHHHHHHEEEECCCCCEEEEECCCCCEEEEEEECCCC
FWSSLWSDKELPIEAGSYRIELKDGADNKTEIHLLNAKNEPLSSEVVSAVYDGFSELMQE
HHHHHCCCCCCCEECCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
DRKTR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]