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The map label for this gene is perM [H]

Identifier: 157961796

GI number: 157961796

Start: 2398405

End: 2399514

Strand: Direct

Name: perM [H]

Synonym: Spea_1973

Alternate gene names: 157961796

Gene position: 2398405-2399514 (Clockwise)

Preceding gene: 157961795

Following gene: 157961798

Centisome position: 46.35

GC content: 43.06

Gene sequence:

>1110_bases
ATGTTATCTGTTTTAAGCCGTTGGTATAAAGACCGTTTTAGTGATCCGCAAGCTGTAACCTTAATGCTTATCTTAATGGG
CTTTGCCCTCGCAATCTACTTTGCTGGTGGCTTATTAGCACCTCTATTGATTGCACTTGTACTGGCATTTTTATTGGAAT
GGCCCGTAGCCCAAATGGCTCGAATAGGCATCAACCGCACCACTGCCGCTTCATTAGTTCTTGTACTGTTTATCGGTTTA
ATGCTGTTAATTAGTTTTGGCCTCGTACCGAGTGTTTGGCGTCAAGGAGTGAGCTTGATGGCCGATTTGCCGAGTATGAT
CGACAAAGGGCTCCATACCGCTCAACTTTATATTAATAAATATCCCCAGTTTGTGAATCCAAGTCAGCTAGATACCATGG
TTGCGGAGCTTAAGAAGATGTTAGATACCCAACATCTACTCGATATTGGTAAACAGCTCTTAGGATATTCAGCCTCATTA
TTGGTGCTGATGGTCTACGTGATTCTAATCCCCTTGCTAGTTTTCTTCTTTTTAAAAGATAAAGATGAATTGATTAAAGG
CAGTAAGCGTTTCTTTCCCACTAACAGAGATTTAGCTCGTAAAGTATGGAATGAGATGCACCAACAGATCTTTAATTACA
TCCGAGGCAAAATAATCGAGATAGTTATCATAGGTGTGGCCAGCTATATTTTCTTTGCCTTGATGGACTTGCGCTATGCA
GCCTTGTTGGGAGTGTTAACCGGATTGTCTGTGTTAATCCCCTATGTCGGTGCCACACTTGTGACACTCCCTATCGCACT
CGTGGCATTTGTTCAGTGGGGCTTTAGTCCTGAATTTGGTTACCTTATGGTGGGGTACGGCATCATCCAAGCATTAGATG
GTAATGTGCTAGTGCCACTTCTATTCTCCGATGCGGTCGATTTGCACCCTGTATTCATTATTGCCGCAGTGCTGATATTT
GGCGGGTTATGGGGGGTATGGGGAGTCTTTTTTGCGATTCCATTAGCCTCATTAGTTAAGGCCGTTATTAATGCCTGGCC
GGTACCCAATAATCCAGATGAACAGAAAATTGAAGCATCAGACAATAAAGCGTTACCCGAAGTGAAATAG

Upstream 100 bases:

>100_bases
GACTAAGTAAAAGAAACTTTATACAGTTTTACAGTGAGTGAAATATTATTTTAATGATGGCTGCAAAGGATTAAAACGGT
CGTCGAGCTAGGGAGTATGA

Downstream 100 bases:

>100_bases
ACTAGTTTCACTCAGTAGAAAGGGGCTAGTGCCCCCTTTTTATTTTTAGCCCTAAACCACCTACTTCAGTAGGGGCCGTT
ATCATCAATTAGGCTCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MLSVLSRWYKDRFSDPQAVTLMLILMGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQMARIGINRTTAASLVLVLFIGL
MLLISFGLVPSVWRQGVSLMADLPSMIDKGLHTAQLYINKYPQFVNPSQLDTMVAELKKMLDTQHLLDIGKQLLGYSASL
LVLMVYVILIPLLVFFFLKDKDELIKGSKRFFPTNRDLARKVWNEMHQQIFNYIRGKIIEIVIIGVASYIFFALMDLRYA
ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGFSPEFGYLMVGYGIIQALDGNVLVPLLFSDAVDLHPVFIIAAVLIF
GGLWGVWGVFFAIPLASLVKAVINAWPVPNNPDEQKIEASDNKALPEVK

Sequences:

>Translated_369_residues
MLSVLSRWYKDRFSDPQAVTLMLILMGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQMARIGINRTTAASLVLVLFIGL
MLLISFGLVPSVWRQGVSLMADLPSMIDKGLHTAQLYINKYPQFVNPSQLDTMVAELKKMLDTQHLLDIGKQLLGYSASL
LVLMVYVILIPLLVFFFLKDKDELIKGSKRFFPTNRDLARKVWNEMHQQIFNYIRGKIIEIVIIGVASYIFFALMDLRYA
ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGFSPEFGYLMVGYGIIQALDGNVLVPLLFSDAVDLHPVFIIAAVLIF
GGLWGVWGVFFAIPLASLVKAVINAWPVPNNPDEQKIEASDNKALPEVK
>Mature_369_residues
MLSVLSRWYKDRFSDPQAVTLMLILMGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQMARIGINRTTAASLVLVLFIGL
MLLISFGLVPSVWRQGVSLMADLPSMIDKGLHTAQLYINKYPQFVNPSQLDTMVAELKKMLDTQHLLDIGKQLLGYSASL
LVLMVYVILIPLLVFFFLKDKDELIKGSKRFFPTNRDLARKVWNEMHQQIFNYIRGKIIEIVIIGVASYIFFALMDLRYA
ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGFSPEFGYLMVGYGIIQALDGNVLVPLLFSDAVDLHPVFIIAAVLIF
GGLWGVWGVFFAIPLASLVKAVINAWPVPNNPDEQKIEASDNKALPEVK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=352, Percent_Identity=49.4318181818182, Blast_Score=342, Evalue=2e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40931; Mature: 40931

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVLSRWYKDRFSDPQAVTLMLILMGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQMA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RIGINRTTAASLVLVLFIGLMLLISFGLVPSVWRQGVSLMADLPSMIDKGLHTAQLYINK
HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YPQFVNPSQLDTMVAELKKMLDTQHLLDIGKQLLGYSASLLVLMVYVILIPLLVFFFLKD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
KDELIKGSKRFFPTNRDLARKVWNEMHQQIFNYIRGKIIEIVIIGVASYIFFALMDLRYA
HHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGFSPEFGYLMVGYGIIQALDGNVLVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEHHH
LFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAWPVPNNPDEQKIEAS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
DNKALPEVK
CCCCCCCCC
>Mature Secondary Structure
MLSVLSRWYKDRFSDPQAVTLMLILMGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQMA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RIGINRTTAASLVLVLFIGLMLLISFGLVPSVWRQGVSLMADLPSMIDKGLHTAQLYINK
HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YPQFVNPSQLDTMVAELKKMLDTQHLLDIGKQLLGYSASLLVLMVYVILIPLLVFFFLKD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
KDELIKGSKRFFPTNRDLARKVWNEMHQQIFNYIRGKIIEIVIIGVASYIFFALMDLRYA
HHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGFSPEFGYLMVGYGIIQALDGNVLVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEHHH
LFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAWPVPNNPDEQKIEAS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
DNKALPEVK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]