| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is argO [H]
Identifier: 157961798
GI number: 157961798
Start: 2401029
End: 2401643
Strand: Direct
Name: argO [H]
Synonym: Spea_1975
Alternate gene names: 157961798
Gene position: 2401029-2401643 (Clockwise)
Preceding gene: 157961796
Following gene: 157961799
Centisome position: 46.4
GC content: 40.49
Gene sequence:
>615_bases ATGCAAACAGCATTTATTCAAGGTATGGGAATAGGCGGAAGCCTAATTATGGCAGTGGGTGCACAAAATGCATTTGTTTT AAAACAAGGGCTTAGGCGGTCTCATTCTTTGCCTATTGCAGCTATTTGTTCATTTATCGATGCGATTATGATAACCGCTG GTGTTGCAGGGTTAGGTCATCTAATTTTAGCCTTTCCATTGATTAAAGATATCGCCAGTATTGGCGGAGCGCTTTTTCTG ATTATTTACGGTTACGGAGCGCTAAAGTCTTCATTTAGCGAATCGAGAATGGAAAGTGAGGAAGCGCTGGCGGCTGATAG TTTAAAGAAGGCTGTGTTAACTACTTTGGCAATTAGTTTGTTAAACCCTCATCTCTATCTGGATACCGTGGTTCTACTCG GTAGCATTAGCGTACAGTTTGAAGGAACAGAAAAGCAATGGTTTGGAGCTGGTGCAGTATTGGCTTCTTTCGTTTGGTTT TTTAGTTTAAGTCTAGGCGCAAAATATTTAAGCCCTGTCTTTAAAAAGCCAAAGGCTTGGTGTTACTTAGATAGATTTAT TTGTATCACCATGTGGTCAATCGCTGCAGCGTTAATCTATCCATATGTTGGATAA
Upstream 100 bases:
>100_bases GATAAGCTTTACTTATACATTATTAGATTTATTAGTTGTACTTATTTTTGGCTGCCGACTATGCTTGCGCCATCGAAATT AAGCTCGTTTTGAGGCAAAC
Downstream 100 bases:
>100_bases AAAAAGGAGCCAATTGGCTCCTTTTTTCGATCAAGGTTATGTCCCGTCCTGAGATAAGTTGACACATTGGAGACTTATCT ATGAAACCTTCAGGTTCTAT
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLRRSHSLPIAAICSFIDAIMITAGVAGLGHLILAFPLIKDIASIGGALFL IIYGYGALKSSFSESRMESEEALAADSLKKAVLTTLAISLLNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWF FSLSLGAKYLSPVFKKPKAWCYLDRFICITMWSIAAALIYPYVG
Sequences:
>Translated_204_residues MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLRRSHSLPIAAICSFIDAIMITAGVAGLGHLILAFPLIKDIASIGGALFL IIYGYGALKSSFSESRMESEEALAADSLKKAVLTTLAISLLNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWF FSLSLGAKYLSPVFKKPKAWCYLDRFICITMWSIAAALIYPYVG >Mature_204_residues MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLRRSHSLPIAAICSFIDAIMITAGVAGLGHLILAFPLIKDIASIGGALFL IIYGYGALKSSFSESRMESEEALAADSLKKAVLTTLAISLLNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWF FSLSLGAKYLSPVFKKPKAWCYLDRFICITMWSIAAALIYPYVG
Specific function: Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine [H]
COG id: COG1279
COG function: function code R; Lysine efflux permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]
Homologues:
Organism=Escherichia coli, GI1789290, Length=198, Percent_Identity=37.3737373737374, Blast_Score=136, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004777 - InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21866; Mature: 21866
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLRRSHSLPIAAICSFIDAIMITAGVAGLGH CCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LILAFPLIKDIASIGGALFLIIYGYGALKSSFSESRMESEEALAADSLKKAVLTTLAISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWFFSLSLGAKYLSPVFKKPKAW HCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH CYLDRFICITMWSIAAALIYPYVG HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLRRSHSLPIAAICSFIDAIMITAGVAGLGH CCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LILAFPLIKDIASIGGALFLIIYGYGALKSSFSESRMESEEALAADSLKKAVLTTLAISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWFFSLSLGAKYLSPVFKKPKAW HCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH CYLDRFICITMWSIAAALIYPYVG HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA