| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961791
Identifier: 157961791
GI number: 157961791
Start: 2393609
End: 2395546
Strand: Reverse
Name: 157961791
Synonym: Spea_1968
Alternate gene names: NA
Gene position: 2395546-2393609 (Counterclockwise)
Preceding gene: 157961792
Following gene: 157961788
Centisome position: 46.29
GC content: 44.58
Gene sequence:
>1938_bases ATGAAGCGTTCCTTATGCTGCATATTGATTAGTGCAATGGGGCTTACTGCATGCGGTGGTAGTAGTGACAGCTCGACTGA AAGCCCTGGTGACATCACTCCTCCACCAGTTGTACCTGATGGTTTAGTCCGCTGTGACACACAATTCCAGCTTGATCAAA CCACAACCACTTCTGGCCTTGTGTTTCTTACTGAACCTAACTATAAATCCGGTCAGCCCGCTGCAATCATTGCAACACTC CAAGGAAAGCATGTCACTGAATATCAATTTAACTGGACTCAGACTGCTGGTTCAAAGCTCATTTTAAAAAGCAGCAAAAG CCCTGTTTTAGCATTTACAGCACACGATACAGGAAGCTACAAATTCGAAGTGACAGCTGTGGGCAGGCAGTCATCTTTTA CACAATCAATTGAAATAAATGTTGAGGCTGGTAGTGATGTTCAAGTTTCTACACGTGTGGATCATCAGGTAACAGAAGGC AACTCGGTTAGCTTTAGAGTCGACACACCAGAAACTAACCCCCTTTCACAGATAAGCTGGTGTATTGCTGGCGGCCCAGC TCTTAATGTTGACATAAGTGCCCCAGAGAAAGCGTTATTCACCGCGCCTAATGTCGATGAAGACACGCTATCCACCCTCA GGGTTTCTGCGGTTATTAACGGTCAATCCGTGACAGATGATGTACATCTACTCATCACAAAAGAAGGTAGCATCACTTCA CAATATTTTGATGAAAGAGTGGCTAAAACCTTTGCCTATAACCTCAGTTCGCCCTACAAAGATGACTTACAGCCATGTGT CTATTCCAATCAACTTCAACAAAGTTGCACTATATCCCGTCTGCCGCTAATCGGTCAGTTGGGGGGGATAAACAAGCAGG CGATATTAGACAGACTCTTAGTCTCTCATCATTGGATGGGAGAGAATTTCGAATACTTCCTTGAGAATTTAGATCCAAAC AGCGATTTTGCCACCCTTTTACAGTCTGTCACTGCCATTGTAATTAGCTATGATGTACGTCCCTCATTTTACTGGGTTGT GACAGGCGCTATTTACTTAGATCCGAATGATCTTTGGTTACTTGCTGAAGAGCGTGACACCATAAATGAAGCACCTGATT ACCGCAGTAGTTTTGGTAATGATTTAAACTTCTTAATGCCTTGGCGATATGTAAAGGACAATAATTACACTTCCTATGTT GTACCAAGAAGTGTACGTGCAGATCGAACAGCAGAGGAAATGATGCCTGACTTAGCCTCACTTCTCTATCATGAACTGGC ACACGCAAATGACTTTTTCCCAAGGAGCGTACACACAAGCTTATCAGGCCCCACTCTACTCGATGACTATTTTCGTCGCA GCGATGCCAAACAGCTCGTTTCCGATCAACTTACGGCTTCCTACCCATTAAATAGTCAGGAAATGGCTAATTTAGCAGAG GTTAGTTTTAAAGGTGCGACGGCTAATGGAACCCAAAAGGCATACAATGCCGCCGATATCAGTAGTTTCTTTTCTCCTGA TCGAGCCTCGGACTATTATGCCTACTCCACGACACGAGAAGATGCTGCAATGTTATTTGAAGAAGCCTTGATGAGTCACA GATATTCAATTCAACGGGATGTCGCGGTTACCGATAAACCTGAAAACCCAACTGGTAGCACTATTAACGTGGACTGGGGA CAACGGGGCCGTATTGGCGATGCTAGTTTAGAGAGTCGAGCCGCATTTGTCATCAACCAGATGATGCCAGAGCTTAACGG CGCTGCGCTAGTCAATGGCTTACCAGAACCTATAGCAATGAAACAAGGGCTGTCTTGGTCTGAAAACTTAATGTTGTCCC CGTCGACCCAATCACAATTGAATCGAACCTCAGCTAGCGCTACTTTTACTCCAGAGATCCGCTTAAGTGGTGATAGACAT GTTAAACCCGTAGATTAA
Upstream 100 bases:
>100_bases AAGCTGCAACACCTCGTTAAACTTCCCTTTGTTTACGCAACAAATCTCGTGATATATTGATTCATCAGAGTATAAAAATA TAATAACGAAGGATAATTCT
Downstream 100 bases:
>100_bases GTCACTTTCGCTAACTTATCTCAGGACGGGACAATTATAGAAACGTAAAAGCCCAGATGCAGATCTGGGCTTTTTAGTTT GTGCTGAACCAATAACTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 645; Mature: 645
Protein sequence:
>645_residues MKRSLCCILISAMGLTACGGSSDSSTESPGDITPPPVVPDGLVRCDTQFQLDQTTTTSGLVFLTEPNYKSGQPAAIIATL QGKHVTEYQFNWTQTAGSKLILKSSKSPVLAFTAHDTGSYKFEVTAVGRQSSFTQSIEINVEAGSDVQVSTRVDHQVTEG NSVSFRVDTPETNPLSQISWCIAGGPALNVDISAPEKALFTAPNVDEDTLSTLRVSAVINGQSVTDDVHLLITKEGSITS QYFDERVAKTFAYNLSSPYKDDLQPCVYSNQLQQSCTISRLPLIGQLGGINKQAILDRLLVSHHWMGENFEYFLENLDPN SDFATLLQSVTAIVISYDVRPSFYWVVTGAIYLDPNDLWLLAEERDTINEAPDYRSSFGNDLNFLMPWRYVKDNNYTSYV VPRSVRADRTAEEMMPDLASLLYHELAHANDFFPRSVHTSLSGPTLLDDYFRRSDAKQLVSDQLTASYPLNSQEMANLAE VSFKGATANGTQKAYNAADISSFFSPDRASDYYAYSTTREDAAMLFEEALMSHRYSIQRDVAVTDKPENPTGSTINVDWG QRGRIGDASLESRAAFVINQMMPELNGAALVNGLPEPIAMKQGLSWSENLMLSPSTQSQLNRTSASATFTPEIRLSGDRH VKPVD
Sequences:
>Translated_645_residues MKRSLCCILISAMGLTACGGSSDSSTESPGDITPPPVVPDGLVRCDTQFQLDQTTTTSGLVFLTEPNYKSGQPAAIIATL QGKHVTEYQFNWTQTAGSKLILKSSKSPVLAFTAHDTGSYKFEVTAVGRQSSFTQSIEINVEAGSDVQVSTRVDHQVTEG NSVSFRVDTPETNPLSQISWCIAGGPALNVDISAPEKALFTAPNVDEDTLSTLRVSAVINGQSVTDDVHLLITKEGSITS QYFDERVAKTFAYNLSSPYKDDLQPCVYSNQLQQSCTISRLPLIGQLGGINKQAILDRLLVSHHWMGENFEYFLENLDPN SDFATLLQSVTAIVISYDVRPSFYWVVTGAIYLDPNDLWLLAEERDTINEAPDYRSSFGNDLNFLMPWRYVKDNNYTSYV VPRSVRADRTAEEMMPDLASLLYHELAHANDFFPRSVHTSLSGPTLLDDYFRRSDAKQLVSDQLTASYPLNSQEMANLAE VSFKGATANGTQKAYNAADISSFFSPDRASDYYAYSTTREDAAMLFEEALMSHRYSIQRDVAVTDKPENPTGSTINVDWG QRGRIGDASLESRAAFVINQMMPELNGAALVNGLPEPIAMKQGLSWSENLMLSPSTQSQLNRTSASATFTPEIRLSGDRH VKPVD >Mature_645_residues MKRSLCCILISAMGLTACGGSSDSSTESPGDITPPPVVPDGLVRCDTQFQLDQTTTTSGLVFLTEPNYKSGQPAAIIATL QGKHVTEYQFNWTQTAGSKLILKSSKSPVLAFTAHDTGSYKFEVTAVGRQSSFTQSIEINVEAGSDVQVSTRVDHQVTEG NSVSFRVDTPETNPLSQISWCIAGGPALNVDISAPEKALFTAPNVDEDTLSTLRVSAVINGQSVTDDVHLLITKEGSITS QYFDERVAKTFAYNLSSPYKDDLQPCVYSNQLQQSCTISRLPLIGQLGGINKQAILDRLLVSHHWMGENFEYFLENLDPN SDFATLLQSVTAIVISYDVRPSFYWVVTGAIYLDPNDLWLLAEERDTINEAPDYRSSFGNDLNFLMPWRYVKDNNYTSYV VPRSVRADRTAEEMMPDLASLLYHELAHANDFFPRSVHTSLSGPTLLDDYFRRSDAKQLVSDQLTASYPLNSQEMANLAE VSFKGATANGTQKAYNAADISSFFSPDRASDYYAYSTTREDAAMLFEEALMSHRYSIQRDVAVTDKPENPTGSTINVDWG QRGRIGDASLESRAAFVINQMMPELNGAALVNGLPEPIAMKQGLSWSENLMLSPSTQSQLNRTSASATFTPEIRLSGDRH VKPVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70966; Mature: 70966
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSLCCILISAMGLTACGGSSDSSTESPGDITPPPVVPDGLVRCDTQFQLDQTTTTSGL CCCCHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCE VFLTEPNYKSGQPAAIIATLQGKHVTEYQFNWTQTAGSKLILKSSKSPVLAFTAHDTGSY EEEECCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCE KFEVTAVGRQSSFTQSIEINVEAGSDVQVSTRVDHQVTEGNSVSFRVDTPETNPLSQISW EEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCEECCCCEEEEEEECCCCCCHHHHEE CIAGGPALNVDISAPEKALFTAPNVDEDTLSTLRVSAVINGQSVTDDVHLLITKEGSITS EEECCCEEEEECCCCCCEEEECCCCCHHHHHHEEEEEEECCCCCCCCEEEEEECCCCCHH QYFDERVAKTFAYNLSSPYKDDLQPCVYSNQLQQSCTISRLPLIGQLGGINKQAILDRLL HHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCHHCCCCHHHCCCCCHHHHHHHHH VSHHWMGENFEYFLENLDPNSDFATLLQSVTAIVISYDVRPSFYWVVTGAIYLDPNDLWL HHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCEEE LAEERDTINEAPDYRSSFGNDLNFLMPWRYVKDNNYTSYVVPRSVRADRTAEEMMPDLAS EECCCCCCCCCCCHHHHCCCCCCEEECEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHH LLYHELAHANDFFPRSVHTSLSGPTLLDDYFRRSDAKQLVSDQLTASYPLNSQEMANLAE HHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VSFKGATANGTQKAYNAADISSFFSPDRASDYYAYSTTREDAAMLFEEALMSHRYSIQRD HEECCCCCCCCHHHCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC VAVTDKPENPTGSTINVDWGQRGRIGDASLESRAAFVINQMMPELNGAALVNGLPEPIAM EEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHH KQGLSWSENLMLSPSTQSQLNRTSASATFTPEIRLSGDRHVKPVD HCCCCCCCCEEECCCHHHHHHHCCCCEEECCEEEECCCCCCCCCC >Mature Secondary Structure MKRSLCCILISAMGLTACGGSSDSSTESPGDITPPPVVPDGLVRCDTQFQLDQTTTTSGL CCCCHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCE VFLTEPNYKSGQPAAIIATLQGKHVTEYQFNWTQTAGSKLILKSSKSPVLAFTAHDTGSY EEEECCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCE KFEVTAVGRQSSFTQSIEINVEAGSDVQVSTRVDHQVTEGNSVSFRVDTPETNPLSQISW EEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCEECCCCEEEEEEECCCCCCHHHHEE CIAGGPALNVDISAPEKALFTAPNVDEDTLSTLRVSAVINGQSVTDDVHLLITKEGSITS EEECCCEEEEECCCCCCEEEECCCCCHHHHHHEEEEEEECCCCCCCCEEEEEECCCCCHH QYFDERVAKTFAYNLSSPYKDDLQPCVYSNQLQQSCTISRLPLIGQLGGINKQAILDRLL HHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCHHCCCCHHHCCCCCHHHHHHHHH VSHHWMGENFEYFLENLDPNSDFATLLQSVTAIVISYDVRPSFYWVVTGAIYLDPNDLWL HHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCEEE LAEERDTINEAPDYRSSFGNDLNFLMPWRYVKDNNYTSYVVPRSVRADRTAEEMMPDLAS EECCCCCCCCCCCHHHHCCCCCCEEECEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHH LLYHELAHANDFFPRSVHTSLSGPTLLDDYFRRSDAKQLVSDQLTASYPLNSQEMANLAE HHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VSFKGATANGTQKAYNAADISSFFSPDRASDYYAYSTTREDAAMLFEEALMSHRYSIQRD HEECCCCCCCCHHHCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC VAVTDKPENPTGSTINVDWGQRGRIGDASLESRAAFVINQMMPELNGAALVNGLPEPIAM EEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHH KQGLSWSENLMLSPSTQSQLNRTSASATFTPEIRLSGDRHVKPVD HCCCCCCCCEEECCCHHHHHHHCCCCEEECCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA