| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961792
Identifier: 157961792
GI number: 157961792
Start: 2395719
End: 2396090
Strand: Reverse
Name: 157961792
Synonym: Spea_1969
Alternate gene names: NA
Gene position: 2396090-2395719 (Counterclockwise)
Preceding gene: 157961793
Following gene: 157961791
Centisome position: 46.31
GC content: 44.09
Gene sequence:
>372_bases ATGAACTCGACTACCCTATTTAAGCTGTGCCGCACGGGTTATGTGGCATTGGTCATGTTGTTAGGGGCATGGTTCATACG CCAAGGATTAACTGGCGAATATTCGATGCTATTTAGCCTGCTTTGGCTTGTGCCGCTACTTCTTCCTCTCAAAGGCATTA TCACTGGCAAACCGTACACTTTTGCTTGGGCCAGTTTTATCCTATGTCTTTATATGTTGCATGCCCTCACCCTGGTTTAT GTAACAGAAACTGACACATTATTTGCTGTAGTTGAGTCATTACTCATTGCAAGTTTACTGGTTGGCTTCCCTTTTTATGC TCGGATCCGGGGCCGAGAACTTGGGCTAGGTTTAAAGAAAAAGAAAAGCTAA
Upstream 100 bases:
>100_bases ACCAAAGCTTATTGAACGTCCTATTGTGTTAGCAAATAATAGAGCCGCAATCGGGCGACCACCAGAAAATGTTCTCTCTA TTTTATAAGTGAGTCAAATC
Downstream 100 bases:
>100_bases TCATCTAGAGTGAAGACGTCGCATAAGCCGCCTTCACTCTTCCCCCCCCTCCGGTTACTTACACCCCAAACAAAGCTGCA ACACCTCGTTAAACTTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNSTTLFKLCRTGYVALVMLLGAWFIRQGLTGEYSMLFSLLWLVPLLLPLKGIITGKPYTFAWASFILCLYMLHALTLVY VTETDTLFAVVESLLIASLLVGFPFYARIRGRELGLGLKKKKS
Sequences:
>Translated_123_residues MNSTTLFKLCRTGYVALVMLLGAWFIRQGLTGEYSMLFSLLWLVPLLLPLKGIITGKPYTFAWASFILCLYMLHALTLVY VTETDTLFAVVESLLIASLLVGFPFYARIRGRELGLGLKKKKS >Mature_123_residues MNSTTLFKLCRTGYVALVMLLGAWFIRQGLTGEYSMLFSLLWLVPLLLPLKGIITGKPYTFAWASFILCLYMLHALTLVY VTETDTLFAVVESLLIASLLVGFPFYARIRGRELGLGLKKKKS
Specific function: Unknown
COG id: COG3308
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13829; Mature: 13829
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTTLFKLCRTGYVALVMLLGAWFIRQGLTGEYSMLFSLLWLVPLLLPLKGIITGKPYT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH FAWASFILCLYMLHALTLVYVTETDTLFAVVESLLIASLLVGFPFYARIRGRELGLGLKK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCC KKS CCC >Mature Secondary Structure MNSTTLFKLCRTGYVALVMLLGAWFIRQGLTGEYSMLFSLLWLVPLLLPLKGIITGKPYT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH FAWASFILCLYMLHALTLVYVTETDTLFAVVESLLIASLLVGFPFYARIRGRELGLGLKK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCC KKS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA